RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 SGO2Q562F6 1265 aa11.03□□□□□ -0.64
COL12A1-206ENST00000474564 C10orf76Q5T2E6 689 aa11.03□□□□□ -0.64
COL12A1-206ENST00000474564 FAM171A1Q5VUB5 890 aa11.03□□□□□ -0.64
COL12A1-206ENST00000474564 OVOS1Q6IE37 1185 aa11.03□□□□□ -0.64
COL12A1-206ENST00000474564 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.03□□□□□ -0.64
COL12A1-206ENST00000474564 TRIM72Q6ZMU5 477 aa11.03□□□□□ -0.64
COL12A1-206ENST00000474564 CEP57Q86XR8 500 aa11.03□□□□□ -0.64
COL12A1-206ENST00000474564 DCP1BQ8IZD4 617 aaKnown RBP11.03□□□□□ -0.64
COL12A1-206ENST00000474564 CXorf38Q8TB03 319 aa11.03□□□□□ -0.64
COL12A1-206ENST00000474564 NOX5Q96PH1 765 aa11.03□□□□□ -0.64
COL12A1-206ENST00000474564 DDX43Q9NXZ2 648 aaKnown RBP11.03□□□□□ -0.64
COL12A1-206ENST00000474564 HESX1Q9UBX0 185 aa11.03□□□□□ -0.64
COL12A1-206ENST00000474564 DNAJB4Q9UDY4 337 aa11.03□□□□□ -0.64
COL12A1-206ENST00000474564 PCNTO95613 3336 aa11.03□□□□□ -0.64
COL12A1-206ENST00000474564 M0QZQ0 153 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 PPEF2O14830 753 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 ZSCAN12O43309 604 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 CILPO75339 1184 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 CAPN15O75808 1086 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 CYP11A1P05108 521 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 AARSP49588 968 aaKnown RBP eCLIP11.02□□□□□ -0.65
COL12A1-206ENST00000474564 EPHB4P54760 987 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 INCA1Q0VD86 236 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 RAB30Q15771 203 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 MEA1Q16626 185 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 SOWAHAQ2M3V2 549 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 ZNF394Q53GI3 561 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 WSCD1Q658N2 575 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 ZNF280DQ6N043 979 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 FUT10Q6P4F1 479 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 ANKS3Q6ZW76 656 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 PDCL2Q8N4E4 241 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 COLGALT1Q8NBJ5 622 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 HASPINQ8TF76 798 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 RABGGTAQ92696 567 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 KAT5Q92993 513 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 VWCEQ96DN2 955 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 AGPAT1Q99943 283 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 ACBD6Q9BR61 282 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 PLVAPQ9BX97 442 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 MIS12Q9H081 205 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 KCNF1Q9H3M0 494 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 HAUS4Q9H6D7 363 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 SMYD3Q9H7B4 428 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 NHEJ1Q9H9Q4 299 aaPredicted RBP11.02□□□□□ -0.65
COL12A1-206ENST00000474564 CDH9Q9ULB4 789 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 CNTN6Q9UQ52 1028 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 STXBP5LQ9Y2K9 1186 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 SCN5AQ14524 2016 aa11.02□□□□□ -0.65
COL12A1-206ENST00000474564 OR6C75A6NL08 312 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 SPTLC1O15269 473 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 URODP06132 367 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 RB1P06400 928 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 PDGFRBP09619 1106 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 CYP11B1P15538 503 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 EIF4A3P38919 411 aaKnown RBP11.01□□□□□ -0.65
COL12A1-206ENST00000474564 BRCC3P46736 316 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 RAP1GAPP47736 663 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 CDR2Q01850 454 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 SMARCB1Q12824 385 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 MAPK8IP2Q13387 824 aaPredicted RBP11.01□□□□□ -0.65
COL12A1-206ENST00000474564 SHHQ15465 462 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 DPY19L2P1Q6NXN4 242 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 C4orf50Q6ZRC1 276 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 IRF2BP2Q7Z5L9 587 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 CRYBG2Q8N1P7 616 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 IGSF21Q96ID5 467 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 ARID3AQ99856 593 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 MRPL45Q9BRJ2 306 aaKnown RBP11.01□□□□□ -0.65
COL12A1-206ENST00000474564 PAAF1Q9BRP4 392 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 MED10Q9BTT4 135 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 TTPALQ9BTX7 342 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 CWH43Q9H720 699 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 CXXC1Q9P0U4 656 aaPredicted RBP11.01□□□□□ -0.65
COL12A1-206ENST00000474564 PYCARDQ9ULZ3 195 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 L1RE1Q9UN81 338 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 PCDHA11Q9Y5I1 949 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 MRPL42Q9Y6G3 142 aaKnown RBP11.01□□□□□ -0.65
COL12A1-206ENST00000474564 EPN1Q9Y6I3 576 aaPredicted RBP11.01□□□□□ -0.65
COL12A1-206ENST00000474564 TTC3P53804 2025 aa11.01□□□□□ -0.65
COL12A1-206ENST00000474564 GOLGA6L9A6NEM1 432 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 NT5C1B-RDH14C9J2C7 533 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 H0YGN5 161 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 RNF225M0QZC1 329 aaPredicted RBP11□□□□□ -0.65
COL12A1-206ENST00000474564 LSM8O95777 96 aaKnown RBP11□□□□□ -0.65
COL12A1-206ENST00000474564 CCDC175P0C221 793 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 PTPN1P18031 435 aaKnown RBP11□□□□□ -0.65
COL12A1-206ENST00000474564 ACO1P21399 889 aaKnown RBP11□□□□□ -0.65
COL12A1-206ENST00000474564 BMP8BP34820 402 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 CA8P35219 290 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 CTNNB1P35222 781 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 CLCN1P35523 988 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 RAD23BP54727 409 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 CCZ1BP86790 482 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 CCZ1P86791 482 aaPredicted RBP11□□□□□ -0.65
COL12A1-206ENST00000474564 MLLT1Q03111 559 aaPredicted RBP11□□□□□ -0.65
COL12A1-206ENST00000474564 CNGA2Q16280 664 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 NFE2Q16621 373 aaPredicted RBP11□□□□□ -0.65
COL12A1-206ENST00000474564 CTXN3Q4LDR2 81 aa11□□□□□ -0.65
COL12A1-206ENST00000474564 TMCO2Q7Z6W1 182 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms