RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 NSFP46459 744 aaKnown RBP10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 CDH8P55286 799 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 SNX16P57768 344 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 TSPY1Q01534 308 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 CDR2Q01850 454 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 GFPT1Q06210 699 aaPredicted RBP10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 INCA1Q0VD86 236 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 DPY19L2P1Q6NXN4 242 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 ALKBH5Q6P6C2 394 aaKnown RBP10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 RAD9BQ6WBX8 426 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.94□□□□□ -0.662e-11■■■■□ 20.1
PRPF38A-202ENST00000474048 TOGARAM2Q6ZUX3 1019 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 ZNF365Q70YC5 407 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 ZNF571Q7Z3V5 609 aaPredicted RBP10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 TMEM139Q8IV31 216 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 GLYCTKQ8IVS8 523 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 CMTR2Q8IYT2 770 aaKnown RBP10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 GSTCDQ8NEC7 633 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 SPATA18Q8TC71 538 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 EPS8L1Q8TE68 723 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 CTNNBL1Q8WYA6 563 aaPredicted RBP10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 TOP1MTQ969P6 601 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 TRIM11Q96F44 468 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 CASD1Q96PB1 797 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 SLC9A7Q96T83 725 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 GPR88Q9GZN0 384 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 SYNCQ9H7C4 482 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 TRMT1Q9NXH9 659 aaKnown RBP10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 ADAMTS1Q9UHI8 967 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 PPP2R2CQ9Y2T4 447 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 SLC4A7Q9Y6M7 1214 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 FNDC1Q4ZHG4 1894 aaPredicted RBP10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 TMCO5BA8MYB1 307 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 TMEM189-UBE2V1I3L0A0 370 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 DGKIO75912 1065 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 ACO1P21399 889 aaKnown RBP10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 WARSP23381 471 aaKnown RBP10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 ITGB8P26012 769 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 CLCN1P35523 988 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 AFF1P51825 1210 aaKnown RBP10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 YWHAHQ04917 246 aaPredicted RBP10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 DSC1Q08554 894 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 MTF1Q14872 753 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 MAPRE1Q15691 268 aaKnown RBP10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 NAB2Q15742 525 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 IFI16Q16666 785 aaKnown RBP10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 LIN9Q5TKA1 542 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 E4F1Q66K89 784 aaPredicted RBP10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 HGSNATQ68CP4 663 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 KIAA1841Q6NSI8 718 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 NOP9Q86U38 636 aaKnown RBP10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 ZNF280BQ86YH2 543 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 COLGALT2Q8IYK4 626 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 TMEM35BQ8NCS4 154 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 ACRBPQ8NEB7 543 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 CXorf38Q8TB03 319 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 KIAA1524Q8TCG1 905 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 IPO4Q8TEX9 1081 aaKnown RBP10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 RABGGTAQ92696 567 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 ZNF558Q96NG5 402 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 MED10Q9BTT4 135 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 MIS12Q9H081 205 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 ADAM28Q9UKQ2 775 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 PCDHB8Q9UN66 801 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 L1RE1Q9UN81 338 aa10.93□□□□□ -0.66
PRPF38A-202ENST00000474048 M0QYV0 167 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 KIF2AO00139 706 aaPredicted RBP10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 NRP1O14786 923 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 KIF5CO60282 957 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 RTN2O75298 545 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 DDHD2O94830 711 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 LSM8O95777 96 aaKnown RBP10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 MMEP08473 750 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 PDGFRBP09619 1106 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 H2AFZP0C0S5 128 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 DESP17661 470 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 BRD2P25440 801 aaKnown RBP10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 PPM1AP35813 382 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 GATMP50440 423 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 VAV2P52735 878 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 RAD23BP54727 409 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 DEFB103AP81534 67 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 CYP27A1Q02318 531 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 SOWAHAQ2M3V2 549 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 TCTN1Q2MV58 587 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 COL13A1Q5TAT6 717 aaPredicted RBP10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 WSCD1Q658N2 575 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 OVOS1Q6IE37 1185 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 H2AFVQ71UI9 128 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 ACOT1Q86TX2 421 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 CEP57Q86XR8 500 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 CCAR2Q8N163 923 aaKnown RBP10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 PDCL2Q8N4E4 241 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 FIBCD1Q8N539 461 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 SLC20A1Q8WUM9 679 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 TMEM169Q96HH4 297 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 SUSD3Q96L08 255 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 ALS2CR12Q96Q35 445 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 MRPL45Q9BRJ2 306 aaKnown RBP10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 NRDE2Q9H7Z3 1164 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms