RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 SEC24AO95486 1093 aa14.11□□□□□ -0.15
TPM3-216ENST00000473036 GLUD1P00367 558 aa14.11□□□□□ -0.15
TPM3-216ENST00000473036 TNNC2P02585 160 aa14.11□□□□□ -0.15
TPM3-216ENST00000473036 TYMPP19971 482 aa14.11□□□□□ -0.15
TPM3-216ENST00000473036 PSMC2P35998 433 aaKnown RBP14.11□□□□□ -0.15
TPM3-216ENST00000473036 VAMP7P51809 220 aa14.11□□□□□ -0.15
TPM3-216ENST00000473036 CDR1P51861 262 aa14.11□□□□□ -0.15
TPM3-216ENST00000473036 MYL6P60660 151 aa14.11□□□□□ -0.15
TPM3-216ENST00000473036 BFSP1Q12934 665 aa14.11□□□□□ -0.15
TPM3-216ENST00000473036 PTPN21Q16825 1174 aa14.11□□□□□ -0.15
TPM3-216ENST00000473036 CCDC142Q17RM4 750 aa14.11□□□□□ -0.15
TPM3-216ENST00000473036 ZACNQ401N2 412 aa14.11□□□□□ -0.15
TPM3-216ENST00000473036 SV2AQ7L0J3 742 aa14.11□□□□□ -0.15
TPM3-216ENST00000473036 DENND4AQ7Z401 1863 aa14.11□□□□□ -0.15
TPM3-216ENST00000473036 PPFIBP1Q86W92 1011 aa14.11□□□□□ -0.15
TPM3-216ENST00000473036 PDCL2Q8N4E4 241 aa14.11□□□□□ -0.15
TPM3-216ENST00000473036 TRIML1Q8N9V2 468 aa14.11□□□□□ -0.15
TPM3-216ENST00000473036 TMC2Q8TDI7 906 aa14.11□□□□□ -0.15
TPM3-216ENST00000473036 ZNF707Q96C28 371 aaPredicted RBP14.11□□□□□ -0.15
TPM3-216ENST00000473036 ASIC4Q96FT7 647 aa14.11□□□□□ -0.15
TPM3-216ENST00000473036 HPDLQ96IR7 371 aa14.11□□□□□ -0.15
TPM3-216ENST00000473036 CRISPLD1Q9H336 500 aa14.11□□□□□ -0.15
TPM3-216ENST00000473036 GDAP2Q9NXN4 497 aa14.11□□□□□ -0.15
TPM3-216ENST00000473036 FRMD4BQ9Y2L6 1034 aa14.11□□□□□ -0.15
TPM3-216ENST00000473036 GFRA3O60609 400 aa14.1□□□□□ -0.15
TPM3-216ENST00000473036 HOXB8P17481 243 aaPredicted RBP14.1□□□□□ -0.15
TPM3-216ENST00000473036 RPL13P26373 211 aaKnown RBP14.1□□□□□ -0.15
TPM3-216ENST00000473036 AVPR2P30518 371 aa14.1□□□□□ -0.15
TPM3-216ENST00000473036 GCLMP48507 274 aa14.1□□□□□ -0.15
TPM3-216ENST00000473036 FKBP3Q00688 224 aaKnown RBP14.1□□□□□ -0.15
TPM3-216ENST00000473036 YWHAHQ04917 246 aaPredicted RBP14.1□□□□□ -0.15
TPM3-216ENST00000473036 LRRC63Q05C16 580 aa14.1□□□□□ -0.15
TPM3-216ENST00000473036 SOWAHAQ2M3V2 549 aa14.1□□□□□ -0.15
TPM3-216ENST00000473036 DPCR1Q3MIW9 517 aa14.1□□□□□ -0.15
TPM3-216ENST00000473036 SV2CQ496J9 727 aa14.1□□□□□ -0.15
TPM3-216ENST00000473036 CTXN3Q4LDR2 81 aa14.1□□□□□ -0.15
TPM3-216ENST00000473036 RARS2Q5T160 578 aaKnown RBP14.1□□□□□ -0.15
TPM3-216ENST00000473036 OVOS1Q6IE37 1185 aa14.1□□□□□ -0.15
TPM3-216ENST00000473036 TMC5Q6UXY8 1006 aa14.1□□□□□ -0.15
TPM3-216ENST00000473036 LRRTM3Q86VH5 581 aa14.1□□□□□ -0.15
TPM3-216ENST00000473036 KREMEN2Q8NCW0 462 aa14.1□□□□□ -0.15
TPM3-216ENST00000473036 APPL2Q8NEU8 664 aa14.1□□□□□ -0.15
TPM3-216ENST00000473036 KBTBD7Q8WVZ9 684 aa14.1□□□□□ -0.15
TPM3-216ENST00000473036 PHOX2BQ99453 314 aa14.1□□□□□ -0.15
TPM3-216ENST00000473036 TMEM63CQ9P1W3 806 aa14.1□□□□□ -0.15
TPM3-216ENST00000473036 POLIQ9UNA4 740 aa14.1□□□□□ -0.15
TPM3-216ENST00000473036 SNX9Q9Y5X1 595 aa14.1□□□□□ -0.15
TPM3-216ENST00000473036 PSMA7O14818 248 aa14.09□□□□□ -0.15
TPM3-216ENST00000473036 IKBKBO14920 756 aa14.09□□□□□ -0.15
TPM3-216ENST00000473036 CETN3O15182 167 aa14.09□□□□□ -0.15
TPM3-216ENST00000473036 C1RP00736 705 aa14.09□□□□□ -0.15
TPM3-216ENST00000473036 ODC1P11926 461 aa14.09□□□□□ -0.15
TPM3-216ENST00000473036 PNPLA4P41247 253 aa14.09□□□□□ -0.15
TPM3-216ENST00000473036 ARPP19P56211 112 aa14.09□□□□□ -0.15
TPM3-216ENST00000473036 CREMQ03060 361 aa14.09□□□□□ -0.15
TPM3-216ENST00000473036 CCDC183Q5T5S1 534 aa14.09□□□□□ -0.15
TPM3-216ENST00000473036 ZNF280DQ6N043 979 aa14.09□□□□□ -0.15
TPM3-216ENST00000473036 PDXDC1Q6P996 788 aa14.09□□□□□ -0.15
TPM3-216ENST00000473036 FOXR2Q6PJQ5 311 aa14.09□□□□□ -0.15
TPM3-216ENST00000473036 RNF19BQ6ZMZ0 732 aa14.09□□□□□ -0.15
TPM3-216ENST00000473036 INTS8Q75QN2 995 aaKnown RBP14.09□□□□□ -0.15
TPM3-216ENST00000473036 UBALD2Q8IYN6 164 aa14.09□□□□□ -0.15
TPM3-216ENST00000473036 TAS1R2Q8TE23 839 aa14.09□□□□□ -0.15
TPM3-216ENST00000473036 ZNF560Q96MR9 790 aa14.09□□□□□ -0.15
TPM3-216ENST00000473036 MKNK1Q9BUB5 465 aa14.09□□□□□ -0.15
TPM3-216ENST00000473036 ADAM7Q9H2U9 754 aa14.09□□□□□ -0.15
TPM3-216ENST00000473036 TMLHEQ9NVH6 421 aa14.09□□□□□ -0.15
TPM3-216ENST00000473036 KMT2EQ8IZD2 1858 aa14.09□□□□□ -0.15
TPM3-216ENST00000473036 DOCK8Q8NF50 2099 aa14.08□□□□□ -0.15
TPM3-216ENST00000473036 H7C4K7 107 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 NRG2O14511 850 aaPredicted RBP14.08□□□□□ -0.16
TPM3-216ENST00000473036 GABRDO14764 452 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 STAU1O95793 577 aaKnown RBP14.08□□□□□ -0.16
TPM3-216ENST00000473036 PAX3P23760 479 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 LMO2P25791 158 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 NLRP12P59046 1061 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 PAK1Q13153 545 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 NCOA4Q13772 614 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 CBWD6Q4V339 395 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 CBWD3Q5JTY5 395 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 CBWD5Q5RIA9 395 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 SPOPLQ6IQ16 392 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 GPR149Q86SP6 731 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 IRF2BP1Q8IU81 584 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 TTC9BQ8N6N2 239 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 ZNF461Q8TAF7 563 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 HDAC7Q8WUI4 952 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 SEMA4DQ92854 862 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 RPGRIP1Q96KN7 1286 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 PKMYT1Q99640 499 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 TSG101Q99816 390 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 LPIN3Q9BQK8 851 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 MRPL45Q9BRJ2 306 aaKnown RBP14.08□□□□□ -0.16
TPM3-216ENST00000473036 PI4K2AQ9BTU6 479 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 SDCBP2Q9H190 292 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 VRTNQ9H8Y1 702 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 APOBEC3GQ9HC16 384 aaKnown RBP14.08□□□□□ -0.16
TPM3-216ENST00000473036 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.08□□□□□ -0.168e-7■■■■■ 194.6
TPM3-216ENST00000473036 DZANK1Q9NVP4 752 aa14.08□□□□□ -0.16
TPM3-216ENST00000473036 NR2E1Q9Y466 385 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms