RNA–Protein interactions for RNA: ENST00000471259.1

MRPL40-203, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-203ENST00000471259 LRRC3Q9BY71 257 aa12.3□□□□□ -0.44
MRPL40-203ENST00000471259 FOXP1Q9H334 677 aaPredicted RBP12.3□□□□□ -0.44
MRPL40-203ENST00000471259 KIF9Q9HAQ2 790 aa12.3□□□□□ -0.44
MRPL40-203ENST00000471259 DDX19AQ9NUU7 478 aaKnown RBP12.3□□□□□ -0.44
MRPL40-203ENST00000471259 GTSE1Q9NYZ3 720 aa12.3□□□□□ -0.44
MRPL40-203ENST00000471259 ANKFY1Q9P2R3 1169 aa12.3□□□□□ -0.44
MRPL40-203ENST00000471259 DSEQ9UL01 958 aa12.3□□□□□ -0.44
MRPL40-203ENST00000471259 CNOT1A5YKK6 2376 aaKnown RBP12.3□□□□□ -0.44
MRPL40-203ENST00000471259 LAD1O00515 517 aa12.29□□□□□ -0.44
MRPL40-203ENST00000471259 HIP1RO75146 1068 aa12.29□□□□□ -0.44
MRPL40-203ENST00000471259 ABCD1P33897 745 aa12.29□□□□□ -0.44
MRPL40-203ENST00000471259 BFSP1Q12934 665 aa12.29□□□□□ -0.44
MRPL40-203ENST00000471259 RUNX3Q13761 415 aa12.29□□□□□ -0.44
MRPL40-203ENST00000471259 ZNF174Q15697 407 aa12.29□□□□□ -0.44
MRPL40-203ENST00000471259 SLC10A6Q3KNW5 377 aa12.29□□□□□ -0.44
MRPL40-203ENST00000471259 TTC38Q5R3I4 469 aa12.29□□□□□ -0.44
MRPL40-203ENST00000471259 METTL23Q86XA0 190 aa12.29□□□□□ -0.44
MRPL40-203ENST00000471259 THEM5Q8N1Q8 247 aa12.29□□□□□ -0.44
MRPL40-203ENST00000471259 NSUN7Q8NE18 718 aaKnown RBP12.29□□□□□ -0.44
MRPL40-203ENST00000471259 SPIRE2Q8WWL2 714 aa12.29□□□□□ -0.44
MRPL40-203ENST00000471259 BICD1Q96G01 975 aa12.29□□□□□ -0.44
MRPL40-203ENST00000471259 KCND2Q9NZV8 630 aa12.29□□□□□ -0.44
MRPL40-203ENST00000471259 NUP210Q8TEM1 1887 aaPredicted RBP12.29□□□□□ -0.44
MRPL40-203ENST00000471259 MTMR11A4FU01 709 aa12.28□□□□□ -0.44
MRPL40-203ENST00000471259 TRDMT1O14717 391 aaKnown RBP12.28□□□□□ -0.44
MRPL40-203ENST00000471259 RDXP35241 583 aaKnown RBP12.28□□□□□ -0.44
MRPL40-203ENST00000471259 AARSP49588 968 aaKnown RBP eCLIP12.28□□□□□ -0.44
MRPL40-203ENST00000471259 NOVA1P51513 510 aaKnown RBP12.28□□□□□ -0.44
MRPL40-203ENST00000471259 MCL1Q07820 350 aa12.28□□□□□ -0.44
MRPL40-203ENST00000471259 TMEM196Q5HYL7 178 aa12.28□□□□□ -0.44
MRPL40-203ENST00000471259 PSAPL1Q6NUJ1 521 aa12.28□□□□□ -0.44
MRPL40-203ENST00000471259 UNQ6494/PRO21346Q6UXR6 183 aa12.28□□□□□ -0.44
MRPL40-203ENST00000471259 KBTBD6Q86V97 674 aa12.28□□□□□ -0.44
MRPL40-203ENST00000471259 TTC8Q8TAM2 541 aa12.28□□□□□ -0.44
MRPL40-203ENST00000471259 C8orf76Q96K31 380 aa12.28□□□□□ -0.44
MRPL40-203ENST00000471259 EDEM2Q9BV94 578 aa12.28□□□□□ -0.44
MRPL40-203ENST00000471259 DNAJC25Q9H1X3 360 aa12.28□□□□□ -0.44
MRPL40-203ENST00000471259 GKN1Q9NS71 199 aa12.28□□□□□ -0.44
MRPL40-203ENST00000471259 LARSQ9P2J5 1176 aaKnown RBP12.28□□□□□ -0.44
MRPL40-203ENST00000471259 CHD8Q9HCK8 2581 aa12.28□□□□□ -0.44
MRPL40-203ENST00000471259 CACNA1GO43497 2377 aa12.28□□□□□ -0.44
MRPL40-203ENST00000471259 NRG2O14511 850 aaPredicted RBP12.27□□□□□ -0.45
MRPL40-203ENST00000471259 SLC16A4O15374 487 aa12.27□□□□□ -0.45
MRPL40-203ENST00000471259 EXTL3O43909 919 aa12.27□□□□□ -0.45
MRPL40-203ENST00000471259 APBB3O95704 486 aa12.27□□□□□ -0.45
MRPL40-203ENST00000471259 CAVIN2O95810 425 aa12.27□□□□□ -0.45
MRPL40-203ENST00000471259 CEACAM1P13688 526 aa12.27□□□□□ -0.45
MRPL40-203ENST00000471259 GUCY2CP25092 1073 aa12.27□□□□□ -0.45
MRPL40-203ENST00000471259 DEKP35659 375 aaKnown RBP12.27□□□□□ -0.45
MRPL40-203ENST00000471259 NR1H3Q13133 447 aa12.27□□□□□ -0.45
MRPL40-203ENST00000471259 PDGFRLQ15198 375 aa12.27□□□□□ -0.45
MRPL40-203ENST00000471259 MGAT5BQ3V5L5 792 aa12.27□□□□□ -0.45
MRPL40-203ENST00000471259 PLK5Q496M5 336 aa12.27□□□□□ -0.45
MRPL40-203ENST00000471259 GAREM2Q75VX8 874 aa12.27□□□□□ -0.45
MRPL40-203ENST00000471259 CMTM8Q8IZV2 173 aa12.27□□□□□ -0.45
MRPL40-203ENST00000471259 NECAB1Q8N987 351 aa12.27□□□□□ -0.45
MRPL40-203ENST00000471259 SPPL2BQ8TCT7 592 aa12.27□□□□□ -0.45
MRPL40-203ENST00000471259 RSPRY1Q96DX4 576 aa12.27□□□□□ -0.45
MRPL40-203ENST00000471259 ZFYVE19Q96K21 471 aa12.27□□□□□ -0.45
MRPL40-203ENST00000471259 SEPT5Q99719 369 aaPredicted RBP12.27□□□□□ -0.45
MRPL40-203ENST00000471259 RPF1Q9H9Y2 349 aaKnown RBP12.27□□□□□ -0.45
MRPL40-203ENST00000471259 TUBGCP4Q9UGJ1 667 aa12.27□□□□□ -0.45
MRPL40-203ENST00000471259 EBF1Q9UH73 591 aa12.27□□□□□ -0.45
MRPL40-203ENST00000471259 SLC27A5Q9Y2P5 690 aa12.27□□□□□ -0.45
MRPL40-203ENST00000471259 TIMM13Q9Y5L4 95 aaPredicted RBP12.27□□□□□ -0.45
MRPL40-203ENST00000471259 TTC26A0AVF1 554 aa12.26□□□□□ -0.45
MRPL40-203ENST00000471259 WNT7AO00755 349 aa12.26□□□□□ -0.45
MRPL40-203ENST00000471259 ABLIM1O14639 778 aa12.26□□□□□ -0.45
MRPL40-203ENST00000471259 KHNYNO15037 678 aaKnown RBP12.26□□□□□ -0.45
MRPL40-203ENST00000471259 OR4Q2P0C623 313 aa12.26□□□□□ -0.45
MRPL40-203ENST00000471259 CXCL8P10145 99 aa12.26□□□□□ -0.45
MRPL40-203ENST00000471259 PLS3P13797 630 aa12.26□□□□□ -0.45
MRPL40-203ENST00000471259 DPP6P42658 865 aa12.26□□□□□ -0.45
MRPL40-203ENST00000471259 FOSBP53539 338 aa12.26□□□□□ -0.45
MRPL40-203ENST00000471259 CREB5Q02930 508 aa12.26□□□□□ -0.45
MRPL40-203ENST00000471259 CCDC6Q16204 474 aa12.26□□□□□ -0.45
MRPL40-203ENST00000471259 ME3Q16798 604 aa12.26□□□□□ -0.45
MRPL40-203ENST00000471259 USP39Q53GS9 565 aaKnown RBP12.26□□□□□ -0.45
MRPL40-203ENST00000471259 STXBP5Q5T5C0 1151 aa12.26□□□□□ -0.45
MRPL40-203ENST00000471259 RINT1Q6NUQ1 792 aa12.26□□□□□ -0.45
MRPL40-203ENST00000471259 C1orf186Q6ZWK4 172 aa12.26□□□□□ -0.45
MRPL40-203ENST00000471259 SYT13Q7L8C5 426 aa12.26□□□□□ -0.45
MRPL40-203ENST00000471259 DCP1BQ8IZD4 617 aaKnown RBP12.26□□□□□ -0.45
MRPL40-203ENST00000471259 CPA6Q8N4T0 437 aa12.26□□□□□ -0.45
MRPL40-203ENST00000471259 KDF1Q8NAX2 398 aaPredicted RBP12.26□□□□□ -0.45
MRPL40-203ENST00000471259 ATAD1Q8NBU5 361 aa12.26□□□□□ -0.45
MRPL40-203ENST00000471259 MRPS31Q92665 395 aaKnown RBP12.26□□□□□ -0.45
MRPL40-203ENST00000471259 P2RY13Q9BPV8 354 aa12.26□□□□□ -0.45
MRPL40-203ENST00000471259 MKNK1Q9BUB5 465 aa12.26□□□□□ -0.45
MRPL40-203ENST00000471259 POLD4Q9HCU8 107 aa12.26□□□□□ -0.45
MRPL40-203ENST00000471259 TDP1Q9NUW8 608 aa12.26□□□□□ -0.45
MRPL40-203ENST00000471259 UXTQ9UBK9 157 aaPredicted RBP12.26□□□□□ -0.45
MRPL40-203ENST00000471259 NCANO14594 1321 aa12.26□□□□□ -0.45
MRPL40-203ENST00000471259 FAM208BQ5VWN6 2430 aa12.26□□□□□ -0.45
MRPL40-203ENST00000471259 E9PMD0 336 aa12.25□□□□□ -0.45
MRPL40-203ENST00000471259 RNF40O75150 1001 aa12.25□□□□□ -0.45
MRPL40-203ENST00000471259 CYP11A1P05108 521 aa12.25□□□□□ -0.45
MRPL40-203ENST00000471259 CSH1P0DML2 217 aa12.25□□□□□ -0.45
MRPL40-203ENST00000471259 CSH2P0DML3 217 aa12.25□□□□□ -0.45
MRPL40-203ENST00000471259 CSRP1P21291 193 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms