RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 LACRTQ9GZZ8 138 aa8.97□□□□□ -0.97
FDPS-209ENST00000471117 CDT1Q9H211 546 aa8.97□□□□□ -0.97
FDPS-209ENST00000471117 NSUN3Q9H649 340 aaKnown RBP8.97□□□□□ -0.97
FDPS-209ENST00000471117 ASH1LQ9NR48 2969 aaKnown RBP8.97□□□□□ -0.97
FDPS-209ENST00000471117 RAB20Q9NX57 234 aa8.97□□□□□ -0.97
FDPS-209ENST00000471117 TRIM10Q9UDY6 481 aa8.97□□□□□ -0.97
FDPS-209ENST00000471117 CD207Q9UJ71 328 aa8.97□□□□□ -0.97
FDPS-209ENST00000471117 CPSF3Q9UKF6 684 aaKnown RBP8.97□□□□□ -0.97
FDPS-209ENST00000471117 GUCA1BQ9UMX6 200 aa8.97□□□□□ -0.97
FDPS-209ENST00000471117 TFR2Q9UP52 801 aa8.97□□□□□ -0.97
FDPS-209ENST00000471117 PIN4Q9Y237 131 aaKnown RBP8.97□□□□□ -0.97
FDPS-209ENST00000471117 NOC2LQ9Y3T9 749 aaKnown RBP8.97□□□□□ -0.97
FDPS-209ENST00000471117 SQORQ9Y6N5 450 aa8.97□□□□□ -0.97
FDPS-209ENST00000471117 TANC1Q9C0D5 1861 aa8.97□□□□□ -0.97
FDPS-209ENST00000471117 PTPRJQ12913 1337 aa8.97□□□□□ -0.97
FDPS-209ENST00000471117 MYH10P35580 1976 aa8.97□□□□□ -0.97
FDPS-209ENST00000471117 PDCD11Q14690 1871 aaKnown RBP8.96□□□□□ -0.97
FDPS-209ENST00000471117 CEP295Q9C0D2 2601 aa8.96□□□□□ -0.97
FDPS-209ENST00000471117 A0A087X0T9 212 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 RIOK3O14730 519 aaKnown RBP8.96□□□□□ -0.98
FDPS-209ENST00000471117 FANCGO15287 622 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 LINC01565O15544 149 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 KRT86O43790 486 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 NPTXRO95502 500 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 CLTAP09496 248 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 CCDC172P0C7W6 258 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 FAM228BP0C875 321 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 GHRP10912 638 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 HOXA11P31270 313 aaPredicted RBP8.96□□□□□ -0.98
FDPS-209ENST00000471117 GTF2F1P35269 517 aaKnown RBP eCLIP8.96□□□□□ -0.983e-8■■■□□ 17.1
FDPS-209ENST00000471117 ATXN1P54253 815 aaKnown RBP8.96□□□□□ -0.98
FDPS-209ENST00000471117 TERF1P54274 439 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 MFAP3P55082 362 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 WDR5P61964 334 aaKnown RBP8.96□□□□□ -0.98
FDPS-209ENST00000471117 POU5F1Q01860 360 aaKnown RBP8.96□□□□□ -0.98
FDPS-209ENST00000471117 GFPT1Q06210 699 aaPredicted RBP8.96□□□□□ -0.98
FDPS-209ENST00000471117 KIF5AQ12840 1032 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 NFX1Q12986 1120 aaKnown RBP8.96□□□□□ -0.98
FDPS-209ENST00000471117 PAK2Q13177 524 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 BIRC3Q13489 604 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 SLC18A3Q16572 532 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 FBXO47Q5MNV8 452 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 CCDC122Q5T0U0 273 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 ZNF618Q5T7W0 954 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 KIAA0319Q5VV43 1072 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 TDRD10Q5VZ19 366 aaKnown RBP8.96□□□□□ -0.98
FDPS-209ENST00000471117 THNSL1Q8IYQ7 743 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 PPM1KQ8N3J5 372 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 OR5B17Q8NGF7 314 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 KAT5Q92993 513 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 TATDN2Q93075 761 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 FAM212AQ96EL1 285 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 RPGRIP1Q96KN7 1286 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 KREMEN1Q96MU8 473 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 RAD9AQ99638 391 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 TSGA10Q9BZW7 698 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 IGFLR1Q9H665 355 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 RPF1Q9H9Y2 349 aaKnown RBP8.96□□□□□ -0.98
FDPS-209ENST00000471117 ERVK-5Q9HDB9 667 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 CHST12Q9NRB3 414 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 ADAMTS1Q9UHI8 967 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 ST3GAL5Q9UNP4 418 aa8.96□□□□□ -0.98
FDPS-209ENST00000471117 DCDC2BA2VCK2 349 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 SOBPA7XYQ1 873 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 PITPNM1O00562 1244 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 PJA2O43164 708 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 ZC3H11AO75152 810 aaKnown RBP eCLIP8.95□□□□□ -0.984e-6■■□□□ 12.7
FDPS-209ENST00000471117 PHACTR2O75167 634 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 TBX10O75333 385 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 IL18RAPO95256 599 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 VNN1O95497 513 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 STAG3L1P0CL83 205 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 SELPP16109 830 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 ZSCAN20P17040 1043 aaPredicted RBP8.95□□□□□ -0.98
FDPS-209ENST00000471117 CD52P31358 61 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 USP8P40818 1118 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 GRM5P41594 1212 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 PIK3CAP42336 1068 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 AP3M2P53677 418 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 OSTNP61366 133 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 GPM6BQ13491 265 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 LPIN1Q14693 890 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 CTC1Q2NKJ3 1217 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 WDR44Q5JSH3 913 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 TWF2Q6IBS0 349 aaKnown RBP8.95□□□□□ -0.98
FDPS-209ENST00000471117 LRRC8DQ7L1W4 858 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 VPS36Q86VN1 386 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 WDR49Q8IV35 697 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 HACE1Q8IYU2 909 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 SLC35F6Q8N357 371 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 TXLNBQ8N3L3 684 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 CEP120Q8N960 986 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 MYRIPQ8NFW9 859 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 HELQQ8TDG4 1101 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 ELMO3Q96BJ8 720 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 PI4K2AQ9BTU6 479 aa8.95□□□□□ -0.98
FDPS-209ENST00000471117 CCDC94Q9BW85 323 aaPredicted RBP8.95□□□□□ -0.98
FDPS-209ENST00000471117 AGO3Q9H9G7 860 aaKnown RBP8.95□□□□□ -0.98
FDPS-209ENST00000471117 LUC7LQ9NQ29 371 aaKnown RBP8.95□□□□□ -0.98
FDPS-209ENST00000471117 MYO1AQ9UBC5 1043 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms