RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 GRB10Q13322 594 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 VWA3BQ502W6 1294 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 DEPDC1Q5TB30 811 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 CNGA4Q8IV77 575 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 SLFN12Q8IYM2 578 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 FBXL16Q8N461 479 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 SPATA4Q8NEY3 305 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 TTC8Q8TAM2 541 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 PPP1R10Q96QC0 940 aaKnown RBP10.46□□□□□ -0.73
NUP50-214ENST00000469163 FERD3LQ96RJ6 166 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 MRIQ9BWK5 157 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 INO80BQ9C086 356 aaPredicted RBP10.46□□□□□ -0.73
NUP50-214ENST00000469163 SLC38A10Q9HBR0 1119 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 KIAA1522Q9P206 1035 aaPredicted RBP10.46□□□□□ -0.73
NUP50-214ENST00000469163 COL24A1Q17RW2 1714 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 DNAJC6O75061 913 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 ENTPD5O75356 428 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 MYBP10242 640 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 TGFB3P10600 412 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 PAFAH1B1P43034 410 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 FKBP1AP62942 108 aaKnown RBP10.46□□□□□ -0.73
NUP50-214ENST00000469163 RASA2Q15283 850 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 NOP9Q86U38 636 aaKnown RBP10.46□□□□□ -0.73
NUP50-214ENST00000469163 FNDC8Q8TC99 324 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 STARD8Q92502 1023 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 GSDMAQ96QA5 445 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 REEP2Q9BRK0 252 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 PDCD2LQ9BRP1 358 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 TRIM9Q9C026 710 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 LAMB2P55268 1798 aa10.46□□□□□ -0.74
NUP50-214ENST00000469163 KCNJ18B7U540 433 aa10.46□□□□□ -0.74
NUP50-214ENST00000469163 BTBD19C9JJ37 291 aa10.46□□□□□ -0.74
NUP50-214ENST00000469163 GOLGA8TH3BQL2 631 aa10.46□□□□□ -0.74
NUP50-214ENST00000469163 MFAP3LO75121 409 aa10.46□□□□□ -0.74
NUP50-214ENST00000469163 HEXIM1O94992 359 aaKnown RBP10.46□□□□□ -0.74
NUP50-214ENST00000469163 OR6B1O95007 311 aa10.46□□□□□ -0.74
NUP50-214ENST00000469163 CCND2P30279 289 aa10.46□□□□□ -0.74
NUP50-214ENST00000469163 DSG3P32926 999 aa10.46□□□□□ -0.74
NUP50-214ENST00000469163 DPYDQ12882 1025 aa10.46□□□□□ -0.74
NUP50-214ENST00000469163 KCNJ12Q14500 433 aa10.46□□□□□ -0.74
NUP50-214ENST00000469163 TKFCQ3LXA3 575 aa10.46□□□□□ -0.74
NUP50-214ENST00000469163 TJAP1Q5JTD0 557 aa10.46□□□□□ -0.74
NUP50-214ENST00000469163 NLRP9Q7RTR0 991 aa10.46□□□□□ -0.74
NUP50-214ENST00000469163 ZNF579Q8NAF0 562 aaKnown RBP10.46□□□□□ -0.74
NUP50-214ENST00000469163 GIPC3Q8TF64 312 aa10.46□□□□□ -0.74
NUP50-214ENST00000469163 ANKS1AQ92625 1134 aa10.46□□□□□ -0.74
NUP50-214ENST00000469163 TBCCD1Q9NVR7 557 aa10.46□□□□□ -0.74
NUP50-214ENST00000469163 EHD2Q9NZN4 543 aa10.46□□□□□ -0.74
NUP50-214ENST00000469163 GTF3C4Q9UKN8 822 aa10.46□□□□□ -0.74
NUP50-214ENST00000469163 PITPNM2Q9BZ72 1349 aa10.46□□□□□ -0.74
NUP50-214ENST00000469163 A0A0C4DFX4 3053 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 SEC24DO94855 1032 aaPredicted RBP10.45□□□□□ -0.74
NUP50-214ENST00000469163 ZBED1O96006 694 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 RCAN1P53805 252 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 RNASE9P60153 205 aaKnown RBP10.45□□□□□ -0.74
NUP50-214ENST00000469163 ARL13BQ3SXY8 428 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 PADI6Q6TGC4 694 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 USP50Q70EL3 339 aaPredicted RBP10.45□□□□□ -0.74
NUP50-214ENST00000469163 TNIP2Q8NFZ5 429 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 CCDC113Q9H0I3 377 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 IP6K2Q9UHH9 426 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 EXOC7Q9UPT5 735 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 AKT3Q9Y243 479 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 RANBP2P49792 3224 aaKnown RBP10.45□□□□□ -0.74
NUP50-214ENST00000469163 DCDC2CA8MYV0 355 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 C19orf81C9J6K1 198 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 WFS1O76024 890 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 ENO2P09104 434 aaPredicted RBP10.45□□□□□ -0.74
NUP50-214ENST00000469163 SNHG28P0DPA3 235 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 CDK4P11802 303 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 GLULP15104 373 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 NR2F2P24468 414 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 BIRC3Q13489 604 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 SUZ12Q15022 739 aaKnown RBP10.45□□□□□ -0.74
NUP50-214ENST00000469163 CMPK2Q5EBM0 449 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 ARHGAP24Q8N264 748 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 DTX3LQ8TDB6 740 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 TNFRSF25Q93038 417 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 CDHR1Q96JP9 859 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 C8orf48Q96LL4 319 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 NOD1Q9Y239 953 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 KANSL1LA0AUZ9 987 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 HNRNPDLO14979 420 aaKnown RBP10.45□□□□□ -0.74
NUP50-214ENST00000469163 LRRN2O75325 713 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 CTSHP09668 335 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 TRIM49P0CI25 452 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 TRIM49CP0CI26 452 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 ADCY8P40145 1251 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 ADCYAP1R1P41586 468 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 ERVK-24P63145 666 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 PGM5Q15124 567 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 PAPD7Q5XG87 772 aaKnown RBP10.45□□□□□ -0.74
NUP50-214ENST00000469163 ANKRD40Q6AI12 368 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 CNNM4Q6P4Q7 775 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 CATSPERGQ6ZRH7 1159 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 GIPC2Q8TF65 315 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 GATA6Q92908 595 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 ANKRD36BP1Q96IX9 119 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 HAUS4Q9H6D7 363 aa10.45□□□□□ -0.74
NUP50-214ENST00000469163 PARVGQ9HBI0 331 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms