RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 LRRC32Q14392 662 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 GPR158Q5T848 1215 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 C9orf57Q5W0N0 161 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 PRR23BQ6ZRT6 265 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 GPBP1Q86WP2 473 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 RALGPS2Q86X27 583 aaPredicted RBP13.28□□□□□ -0.28
COL5A1-207ENST00000469093 CD302Q8IX05 232 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 OR10T2Q8NGX3 314 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 RTKNQ9BST9 563 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 MSTO1Q9BUK6 570 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 BLOC1S4Q9NUP1 217 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 C2orf42Q9NWW7 574 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 OBP2AQ9NY56 170 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 GTSE1Q9NYZ3 720 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 KIF3AQ9Y496 699 aa13.28□□□□□ -0.28
COL5A1-207ENST00000469093 COL4A2P08572 1712 aa13.27□□□□□ -0.28
COL5A1-207ENST00000469093 PDCD11Q14690 1871 aaKnown RBP13.27□□□□□ -0.28
COL5A1-207ENST00000469093 TICRRQ7Z2Z1 1910 aa13.27□□□□□ -0.28
COL5A1-207ENST00000469093 MYH11P35749 1972 aa13.27□□□□□ -0.28
COL5A1-207ENST00000469093 ANO9A1A5B4 782 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 DPYSL4O14531 572 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 SLC26A4O43511 780 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 FAM13AO94988 1023 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 PAPSS2O95340 614 aaPredicted RBP13.27□□□□□ -0.29
COL5A1-207ENST00000469093 FGF19O95750 216 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 CYP11A1P05108 521 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 NFICP08651 508 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 ODC1P11926 461 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 WEE1P30291 646 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 HOXC13P31276 330 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 CTHP32929 405 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 UBA7P41226 1012 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 TUFMP49411 452 aaKnown RBP13.27□□□□□ -0.29
COL5A1-207ENST00000469093 ACOT2P49753 483 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 CDR1P51861 262 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 SRSF5Q13243 272 aaKnown RBP13.27□□□□□ -0.29
COL5A1-207ENST00000469093 DHX8Q14562 1220 aaKnown RBP13.27□□□□□ -0.29
COL5A1-207ENST00000469093 ARHGAP29Q52LW3 1261 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 DGKKQ5KSL6 1271 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 Q6ZS52 159 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 ITIH5Q86UX2 942 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 LRRTM3Q86VH5 581 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 AK8Q96MA6 479 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 CNTNAP3BQ96NU0 1288 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 FIZ1Q96SL8 496 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 LPIN3Q9BQK8 851 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 CNTNAP3Q9BZ76 1288 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 ZCWPW1Q9H0M4 648 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 TASP1Q9H6P5 420 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 IL21Q9HBE4 155 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 PARVGQ9HBI0 331 aa13.27□□□□□ -0.29
COL5A1-207ENST00000469093 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.27□□□□□ -0.29
COL5A1-207ENST00000469093 ANKRD63C9JTQ0 380 aa13.26□□□□□ -0.29
COL5A1-207ENST00000469093 K7ENM7 598 aa13.26□□□□□ -0.29
COL5A1-207ENST00000469093 LRP3O75074 770 aa13.26□□□□□ -0.29
COL5A1-207ENST00000469093 PRAMEF12O95522 483 aa13.26□□□□□ -0.29
COL5A1-207ENST00000469093 ATF6P18850 670 aa13.26□□□□□ -0.29
COL5A1-207ENST00000469093 NMT1P30419 496 aaKnown RBP13.26□□□□□ -0.29
COL5A1-207ENST00000469093 HOXA6P31267 233 aa13.26□□□□□ -0.29
COL5A1-207ENST00000469093 CNR2P34972 360 aa13.26□□□□□ -0.29
COL5A1-207ENST00000469093 GTF2BQ00403 316 aa13.26□□□□□ -0.29
COL5A1-207ENST00000469093 TNK2Q07912 1038 aa13.26□□□□□ -0.29
COL5A1-207ENST00000469093 CCINQ13939 588 aa13.26□□□□□ -0.29
COL5A1-207ENST00000469093 MCM6Q14566 821 aa13.26□□□□□ -0.29
COL5A1-207ENST00000469093 PON2Q15165 354 aa13.26□□□□□ -0.29
COL5A1-207ENST00000469093 ARHGAP15Q53QZ3 475 aa13.26□□□□□ -0.29
COL5A1-207ENST00000469093 HEATR6Q6AI08 1181 aaKnown RBP13.26□□□□□ -0.29
COL5A1-207ENST00000469093 LONP2Q86WA8 852 aa13.26□□□□□ -0.29
COL5A1-207ENST00000469093 BPIFB1Q8TDL5 484 aa13.26□□□□□ -0.29
COL5A1-207ENST00000469093 CALML4Q96GE6 196 aa13.26□□□□□ -0.29
COL5A1-207ENST00000469093 TMX3Q96JJ7 454 aa13.26□□□□□ -0.29
COL5A1-207ENST00000469093 SEPT5Q99719 369 aaPredicted RBP13.26□□□□□ -0.29
COL5A1-207ENST00000469093 SLC46A2Q9BY10 475 aa13.26□□□□□ -0.29
COL5A1-207ENST00000469093 ZHX3Q9H4I2 956 aa13.26□□□□□ -0.29
COL5A1-207ENST00000469093 ASB7Q9H672 318 aa13.26□□□□□ -0.29
COL5A1-207ENST00000469093 SEMA4GQ9NTN9 838 aa13.26□□□□□ -0.29
COL5A1-207ENST00000469093 DERAQ9Y315 318 aa13.26□□□□□ -0.29
COL5A1-207ENST00000469093 CNOT1A5YKK6 2376 aaKnown RBP13.25□□□□□ -0.29
COL5A1-207ENST00000469093 TISP43B9A030 160 aa13.25□□□□□ -0.29
COL5A1-207ENST00000469093 H3BQV1 296 aa13.25□□□□□ -0.29
COL5A1-207ENST00000469093 CYB561D2O14569 222 aa13.25□□□□□ -0.29
COL5A1-207ENST00000469093 GJB2P29033 226 aa13.25□□□□□ -0.29
COL5A1-207ENST00000469093 CYP4F8P98187 520 aa13.25□□□□□ -0.29
COL5A1-207ENST00000469093 GRIN1Q05586 938 aa13.25□□□□□ -0.29
COL5A1-207ENST00000469093 TMEM132DQ14C87 1099 aa13.25□□□□□ -0.29
COL5A1-207ENST00000469093 KARSQ15046 597 aaKnown RBP13.25□□□□□ -0.29
COL5A1-207ENST00000469093 CSRP2Q16527 193 aa13.25□□□□□ -0.29
COL5A1-207ENST00000469093 MGAT5BQ3V5L5 792 aa13.25□□□□□ -0.29
COL5A1-207ENST00000469093 C8orf34Q49A92 452 aa13.25□□□□□ -0.29
COL5A1-207ENST00000469093 SLC39A12Q504Y0 691 aa13.25□□□□□ -0.29
COL5A1-207ENST00000469093 ZC2HC1CQ53FD0 456 aaPredicted RBP13.25□□□□□ -0.29
COL5A1-207ENST00000469093 SYNPOQ8N3V7 929 aa13.25□□□□□ -0.29
COL5A1-207ENST00000469093 FAM200AQ8TCP9 573 aa13.25□□□□□ -0.29
COL5A1-207ENST00000469093 GIPC2Q8TF65 315 aa13.25□□□□□ -0.29
COL5A1-207ENST00000469093 SMG9Q9H0W8 520 aaKnown RBP13.25□□□□□ -0.29
COL5A1-207ENST00000469093 GKN1Q9NS71 199 aa13.25□□□□□ -0.29
COL5A1-207ENST00000469093 DPP3Q9NY33 737 aa13.25□□□□□ -0.29
COL5A1-207ENST00000469093 DSEQ9UL01 958 aa13.25□□□□□ -0.29
COL5A1-207ENST00000469093 STYXL1Q9Y6J8 313 aa13.25□□□□□ -0.29
COL5A1-207ENST00000469093 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms