RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 PTPROQ16827 1216 aa16.25■□□□□ 0.19
NPHP4-205ENST00000466897 FIGNQ5HY92 759 aa16.25■□□□□ 0.19
NPHP4-205ENST00000466897 ZNF697Q5TEC3 545 aa16.25■□□□□ 0.19
NPHP4-205ENST00000466897 KLHDC7AQ5VTJ3 777 aa16.25■□□□□ 0.19
NPHP4-205ENST00000466897 WSCD1Q658N2 575 aa16.25■□□□□ 0.19
NPHP4-205ENST00000466897 OVOS1Q6IE37 1185 aa16.25■□□□□ 0.19
NPHP4-205ENST00000466897 ZNF280DQ6N043 979 aa16.25■□□□□ 0.19
NPHP4-205ENST00000466897 KIAA1841Q6NSI8 718 aa16.25■□□□□ 0.19
NPHP4-205ENST00000466897 UNC93AQ86WB7 457 aa16.25■□□□□ 0.19
NPHP4-205ENST00000466897 ARHGEF19Q8IW93 802 aa16.25■□□□□ 0.19
NPHP4-205ENST00000466897 PPM1KQ8N3J5 372 aa16.25■□□□□ 0.19
NPHP4-205ENST00000466897 UBR7Q8N806 425 aa16.25■□□□□ 0.19
NPHP4-205ENST00000466897 LNX1Q8TBB1 728 aaPredicted RBP16.25■□□□□ 0.19
NPHP4-205ENST00000466897 IQCDQ96DY2 449 aa16.25■□□□□ 0.19
NPHP4-205ENST00000466897 LSM14BQ9BX40 385 aaKnown RBP16.25■□□□□ 0.19
NPHP4-205ENST00000466897 GANQ9H2C0 597 aa16.25■□□□□ 0.19
NPHP4-205ENST00000466897 SMYD3Q9H7B4 428 aa16.25■□□□□ 0.19
NPHP4-205ENST00000466897 CERS4Q9HA82 394 aa16.25■□□□□ 0.19
NPHP4-205ENST00000466897 RXFP1Q9HBX9 757 aa16.25■□□□□ 0.19
NPHP4-205ENST00000466897 LMCD1Q9NZU5 365 aa16.25■□□□□ 0.19
NPHP4-205ENST00000466897 MTRRQ9UBK8 725 aa16.25■□□□□ 0.19
NPHP4-205ENST00000466897 MYO9BQ13459 2157 aa16.25■□□□□ 0.19
NPHP4-205ENST00000466897 CDH23Q9H251 3354 aa16.25■□□□□ 0.19
NPHP4-205ENST00000466897 OR6C75A6NL08 312 aa16.24■□□□□ 0.19
NPHP4-205ENST00000466897 CLSTN1O94985 981 aa16.24■□□□□ 0.19
NPHP4-205ENST00000466897 C1RP00736 705 aa16.24■□□□□ 0.19
NPHP4-205ENST00000466897 UCHL3P15374 230 aa16.24■□□□□ 0.19
NPHP4-205ENST00000466897 POU3F3P20264 500 aaPredicted RBP16.24■□□□□ 0.19
NPHP4-205ENST00000466897 MFAP3P55082 362 aa16.24■□□□□ 0.19
NPHP4-205ENST00000466897 TMC7Q7Z402 723 aa16.24■□□□□ 0.19
NPHP4-205ENST00000466897 CEP57Q86XR8 500 aa16.24■□□□□ 0.19
NPHP4-205ENST00000466897 THEM5Q8N1Q8 247 aa16.24■□□□□ 0.19
NPHP4-205ENST00000466897 GDPD5Q8WTR4 605 aa16.24■□□□□ 0.19
NPHP4-205ENST00000466897 RIN2Q8WYP3 895 aaPredicted RBP16.24■□□□□ 0.19
NPHP4-205ENST00000466897 MRPL38Q96DV4 380 aaKnown RBP16.24■□□□□ 0.19
NPHP4-205ENST00000466897 LRCH3Q96II8 777 aa16.24■□□□□ 0.19
NPHP4-205ENST00000466897 TCF25Q9BQ70 676 aa16.24■□□□□ 0.19
NPHP4-205ENST00000466897 ACBD6Q9BR61 282 aa16.24■□□□□ 0.19
NPHP4-205ENST00000466897 NAA15Q9BXJ9 866 aaKnown RBP16.24■□□□□ 0.19
NPHP4-205ENST00000466897 SDCBP2Q9H190 292 aa16.24■□□□□ 0.19
NPHP4-205ENST00000466897 BARX2Q9UMQ3 279 aaPredicted RBP16.24■□□□□ 0.19
NPHP4-205ENST00000466897 CNTN6Q9UQ52 1028 aa16.24■□□□□ 0.19
NPHP4-205ENST00000466897 STXBP5LQ9Y2K9 1186 aa16.24■□□□□ 0.19
NPHP4-205ENST00000466897 AP5Z1O43299 807 aa16.23■□□□□ 0.19
NPHP4-205ENST00000466897 CILPO75339 1184 aa16.23■□□□□ 0.19
NPHP4-205ENST00000466897 NOL4O94818 638 aa16.23■□□□□ 0.19
NPHP4-205ENST00000466897 PCSK1P29120 753 aa16.23■□□□□ 0.19
NPHP4-205ENST00000466897 ERVFC1P60507 584 aa16.23■□□□□ 0.19
NPHP4-205ENST00000466897 LRMPQ12912 555 aa16.23■□□□□ 0.19
NPHP4-205ENST00000466897 PSMD5Q16401 504 aa16.23■□□□□ 0.19
NPHP4-205ENST00000466897 SLC8B1Q6J4K2 584 aa16.23■□□□□ 0.19
NPHP4-205ENST00000466897 SCARA5Q6ZMJ2 495 aa16.23■□□□□ 0.19
NPHP4-205ENST00000466897 MRPL43Q8N983 215 aaKnown RBP16.23■□□□□ 0.19
NPHP4-205ENST00000466897 NEK11Q8NG66 645 aa16.23■□□□□ 0.19
NPHP4-205ENST00000466897 ELMO3Q96BJ8 720 aa16.23■□□□□ 0.19
NPHP4-205ENST00000466897 MRFAP1L1Q96HT8 127 aa16.23■□□□□ 0.19
NPHP4-205ENST00000466897 B3GALT6Q96L58 329 aa16.23■□□□□ 0.19
NPHP4-205ENST00000466897 KREMEN1Q96MU8 473 aa16.23■□□□□ 0.19
NPHP4-205ENST00000466897 ARID3AQ99856 593 aa16.23■□□□□ 0.19
NPHP4-205ENST00000466897 RTP3Q9BQQ7 232 aa16.23■□□□□ 0.19
NPHP4-205ENST00000466897 MRPL45Q9BRJ2 306 aaKnown RBP16.23■□□□□ 0.19
NPHP4-205ENST00000466897 NUP58Q9BVL2 599 aa16.23■□□□□ 0.19
NPHP4-205ENST00000466897 EDEM3Q9BZQ6 932 aa16.23■□□□□ 0.19
NPHP4-205ENST00000466897 TRIM5Q9C035 493 aa16.23■□□□□ 0.19
NPHP4-205ENST00000466897 DNAI2Q9GZS0 605 aa16.23■□□□□ 0.19
NPHP4-205ENST00000466897 SNX25Q9H3E2 840 aa16.23■□□□□ 0.19
NPHP4-205ENST00000466897 UBE2TQ9NPD8 197 aaPredicted RBP16.23■□□□□ 0.19
NPHP4-205ENST00000466897 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.23■□□□□ 0.193e-6■■■■■ 94.9
NPHP4-205ENST00000466897 ENTPD7Q9NQZ7 604 aa16.23■□□□□ 0.19
NPHP4-205ENST00000466897 CISHQ9NSE2 258 aa16.23■□□□□ 0.19
NPHP4-205ENST00000466897 FAM207AQ9NSI2 230 aaPredicted RBP16.23■□□□□ 0.19
NPHP4-205ENST00000466897 DDX43Q9NXZ2 648 aaKnown RBP16.23■□□□□ 0.19
NPHP4-205ENST00000466897 TIMM13Q9Y5L4 95 aaPredicted RBP16.23■□□□□ 0.19
NPHP4-205ENST00000466897 GOLGA6L3A6NEY3 463 aa16.22■□□□□ 0.19
NPHP4-205ENST00000466897 C2orf71A6NGG8 1288 aa16.22■□□□□ 0.19
NPHP4-205ENST00000466897 WEE2P0C1S8 567 aa16.22■□□□□ 0.19
NPHP4-205ENST00000466897 ACO1P21399 889 aaKnown RBP16.22■□□□□ 0.19
NPHP4-205ENST00000466897 GNL1P36915 607 aaPredicted RBP16.22■□□□□ 0.19
NPHP4-205ENST00000466897 KLK7P49862 253 aa16.22■□□□□ 0.19
NPHP4-205ENST00000466897 CDH8P55286 799 aa16.22■□□□□ 0.19
NPHP4-205ENST00000466897 CTXN3Q4LDR2 81 aa16.22■□□□□ 0.19
NPHP4-205ENST00000466897 IQCEQ6IPM2 695 aa16.22■□□□□ 0.19
NPHP4-205ENST00000466897 RRAGAQ7L523 313 aa16.22■□□□□ 0.19
NPHP4-205ENST00000466897 OSTM1Q86WC4 334 aa16.22■□□□□ 0.19
NPHP4-205ENST00000466897 SHC3Q92529 594 aa16.22■□□□□ 0.19
NPHP4-205ENST00000466897 PCMTD1Q96MG8 357 aaPredicted RBP16.22■□□□□ 0.19
NPHP4-205ENST00000466897 TTYH3Q9C0H2 523 aa16.22■□□□□ 0.19
NPHP4-205ENST00000466897 CEP72Q9P209 647 aa16.22■□□□□ 0.19
NPHP4-205ENST00000466897 DNAJC12Q9UKB3 198 aa16.22■□□□□ 0.19
NPHP4-205ENST00000466897 CDH9Q9ULB4 789 aa16.22■□□□□ 0.19
NPHP4-205ENST00000466897 FHOD1Q9Y613 1164 aa16.22■□□□□ 0.19
NPHP4-205ENST00000466897 A0A1W2PQJ5 194 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 EPHB6O15197 1021 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 CXCL14O95715 111 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 TRIM21P19474 475 aaKnown RBP16.21■□□□□ 0.19
NPHP4-205ENST00000466897 RAP1GAPP47736 663 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 NDUFV1P49821 464 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 PLCB2Q00722 1185 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 APBA1Q02410 837 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 SMARCB1Q12824 385 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms