RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 PRR23BQ6ZRT6 265 aa21.44■■□□□ 1.02
VARS-221ENST00000463184 GPBP1Q86WP2 473 aa21.44■■□□□ 1.02
VARS-221ENST00000463184 FAM212AQ96EL1 285 aa21.44■■□□□ 1.02
VARS-221ENST00000463184 CALML4Q96GE6 196 aa21.44■■□□□ 1.02
VARS-221ENST00000463184 MKNK1Q9BUB5 465 aa21.44■■□□□ 1.02
VARS-221ENST00000463184 MSTO1Q9BUK6 570 aa21.44■■□□□ 1.02
VARS-221ENST00000463184 PARVGQ9HBI0 331 aa21.44■■□□□ 1.02
VARS-221ENST00000463184 CPSF3Q9UKF6 684 aaKnown RBP21.44■■□□□ 1.02
VARS-221ENST00000463184 DERAQ9Y315 318 aa21.44■■□□□ 1.02
VARS-221ENST00000463184 NCOR2Q9Y618 2525 aa21.43■■□□□ 1.02
VARS-221ENST00000463184 SPECC1L-ADORA2AF8WAN1 911 aa21.43■■□□□ 1.02
VARS-221ENST00000463184 PIRO00625 290 aa21.43■■□□□ 1.02
VARS-221ENST00000463184 TRAK2O60296 914 aa21.43■■□□□ 1.02
VARS-221ENST00000463184 CYP11A1P05108 521 aa21.43■■□□□ 1.02
VARS-221ENST00000463184 GABRR2P28476 465 aa21.43■■□□□ 1.02
VARS-221ENST00000463184 CTHP32929 405 aa21.43■■□□□ 1.02
VARS-221ENST00000463184 SPEM2Q0P670 501 aa21.43■■□□□ 1.02
VARS-221ENST00000463184 SIM2Q14190 667 aaPredicted RBP21.43■■□□□ 1.02
VARS-221ENST00000463184 GPR158Q5T848 1215 aa21.43■■□□□ 1.02
VARS-221ENST00000463184 C9orf57Q5W0N0 161 aa21.43■■□□□ 1.02
VARS-221ENST00000463184 GPIHBP1Q8IV16 184 aa21.43■■□□□ 1.02
VARS-221ENST00000463184 FAM200AQ8TCP9 573 aa21.43■■□□□ 1.02
VARS-221ENST00000463184 LRRC3BQ96PB8 259 aa21.43■■□□□ 1.02
VARS-221ENST00000463184 TMEM209Q96SK2 561 aa21.43■■□□□ 1.02
VARS-221ENST00000463184 RBM12Q9NTZ6 932 aaKnown RBP21.43■■□□□ 1.02
VARS-221ENST00000463184 DSEQ9UL01 958 aa21.43■■□□□ 1.02
VARS-221ENST00000463184 H3BQV1 296 aa21.42■■□□□ 1.02
VARS-221ENST00000463184 UBA7P41226 1012 aa21.42■■□□□ 1.02
VARS-221ENST00000463184 SOX9P48436 509 aa21.42■■□□□ 1.02
VARS-221ENST00000463184 PLCB2Q00722 1185 aa21.42■■□□□ 1.02
VARS-221ENST00000463184 TMEM132DQ14C87 1099 aa21.42■■□□□ 1.02
VARS-221ENST00000463184 LONP2Q86WA8 852 aa21.42■■□□□ 1.02
VARS-221ENST00000463184 TTC9BQ8N6N2 239 aa21.42■■□□□ 1.02
VARS-221ENST00000463184 ASB7Q9H672 318 aa21.42■■□□□ 1.02
VARS-221ENST00000463184 TASP1Q9H6P5 420 aa21.42■■□□□ 1.02
VARS-221ENST00000463184 GTSE1Q9NYZ3 720 aa21.42■■□□□ 1.02
VARS-221ENST00000463184 ANO9A1A5B4 782 aa21.41■■□□□ 1.02
VARS-221ENST00000463184 CHURC1-FNTBB4DL54 471 aa21.41■■□□□ 1.02
VARS-221ENST00000463184 K7ESF4 209 aa21.41■■□□□ 1.02
VARS-221ENST00000463184 HRO43593 1189 aa21.41■■□□□ 1.02
VARS-221ENST00000463184 SOAT2O75908 522 aa21.41■■□□□ 1.02
VARS-221ENST00000463184 NFICP08651 508 aa21.41■■□□□ 1.02
VARS-221ENST00000463184 FNTBP49356 437 aa21.41■■□□□ 1.02
VARS-221ENST00000463184 GTF2BQ00403 316 aa21.41■■□□□ 1.02
VARS-221ENST00000463184 SMARCB1Q12824 385 aa21.41■■□□□ 1.02
VARS-221ENST00000463184 DHX8Q14562 1220 aaKnown RBP21.41■■□□□ 1.02
VARS-221ENST00000463184 VEPH1Q14D04 833 aa21.41■■□□□ 1.02
VARS-221ENST00000463184 SLC39A12Q504Y0 691 aa21.41■■□□□ 1.02
VARS-221ENST00000463184 TXNDC11Q6PKC3 985 aa21.41■■□□□ 1.02
VARS-221ENST00000463184 SYNPOQ8N3V7 929 aa21.41■■□□□ 1.02
VARS-221ENST00000463184 OR10T2Q8NGX3 314 aa21.41■■□□□ 1.02
VARS-221ENST00000463184 NETO1Q8TDF5 533 aa21.41■■□□□ 1.02
VARS-221ENST00000463184 BPIFB1Q8TDL5 484 aa21.41■■□□□ 1.02
VARS-221ENST00000463184 ZCWPW1Q9H0M4 648 aa21.41■■□□□ 1.02
VARS-221ENST00000463184 ZMYM5Q9UJ78 669 aa21.41■■□□□ 1.02
VARS-221ENST00000463184 DCDC2BA2VCK2 349 aa21.4■■□□□ 1.02
VARS-221ENST00000463184 K7ELQ4 463 aaPredicted RBP21.4■■□□□ 1.02
VARS-221ENST00000463184 KRT18P05783 430 aaKnown RBP21.4■■□□□ 1.02
VARS-221ENST00000463184 CDC25CP30307 473 aa21.4■■□□□ 1.02
VARS-221ENST00000463184 CUL4AQ13619 759 aa21.4■■□□□ 1.02
VARS-221ENST00000463184 MGAT5BQ3V5L5 792 aa21.4■■□□□ 1.02
VARS-221ENST00000463184 WDR44Q5JSH3 913 aa21.4■■□□□ 1.02
VARS-221ENST00000463184 SLFN12LQ6IEE8 588 aa21.4■■□□□ 1.02
VARS-221ENST00000463184 SLC39A4Q6P5W5 647 aa21.4■■□□□ 1.02
VARS-221ENST00000463184 METTL23Q86XA0 190 aa21.4■■□□□ 1.02
VARS-221ENST00000463184 THEM5Q8N1Q8 247 aa21.4■■□□□ 1.02
VARS-221ENST00000463184 C2orf15Q8WU43 125 aaKnown RBP21.4■■□□□ 1.02
VARS-221ENST00000463184 ZFYVE19Q96K21 471 aa21.4■■□□□ 1.02
VARS-221ENST00000463184 GCNAQ96QF7 691 aa21.4■■□□□ 1.02
VARS-221ENST00000463184 SEPT5Q99719 369 aaPredicted RBP21.4■■□□□ 1.02
VARS-221ENST00000463184 LPIN3Q9BQK8 851 aa21.4■■□□□ 1.02
VARS-221ENST00000463184 BLOC1S4Q9NUP1 217 aa21.4■■□□□ 1.02
VARS-221ENST00000463184 THG1LQ9NWX6 298 aaKnown RBP21.4■■□□□ 1.02
VARS-221ENST00000463184 C2CD2Q9Y426 696 aa21.4■■□□□ 1.02
VARS-221ENST00000463184 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.4■■□□□ 1.02
VARS-221ENST00000463184 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.4■■□□□ 1.02
VARS-221ENST00000463184 GJB2P29033 226 aa21.39■■□□□ 1.01
VARS-221ENST00000463184 HOXA6P31267 233 aa21.39■■□□□ 1.01
VARS-221ENST00000463184 POU5F1Q01860 360 aaKnown RBP21.39■■□□□ 1.01
VARS-221ENST00000463184 DMWDQ09019 674 aa21.39■■□□□ 1.01
VARS-221ENST00000463184 CCINQ13939 588 aa21.39■■□□□ 1.01
VARS-221ENST00000463184 MCM6Q14566 821 aa21.39■■□□□ 1.01
VARS-221ENST00000463184 PON2Q15165 354 aa21.39■■□□□ 1.01
VARS-221ENST00000463184 PTPAQ15257 358 aa21.39■■□□□ 1.01
VARS-221ENST00000463184 TAF12Q16514 161 aa21.39■■□□□ 1.01
VARS-221ENST00000463184 Q6ZS52 159 aa21.39■■□□□ 1.01
VARS-221ENST00000463184 TTC8Q8TAM2 541 aa21.39■■□□□ 1.01
VARS-221ENST00000463184 RAD54LQ92698 747 aa21.39■■□□□ 1.01
VARS-221ENST00000463184 CNTNAP3BQ96NU0 1288 aa21.39■■□□□ 1.01
VARS-221ENST00000463184 FIZ1Q96SL8 496 aa21.39■■□□□ 1.01
VARS-221ENST00000463184 CNTNAP3Q9BZ76 1288 aa21.39■■□□□ 1.01
VARS-221ENST00000463184 ZHX3Q9H4I2 956 aa21.39■■□□□ 1.01
VARS-221ENST00000463184 IL21Q9HBE4 155 aa21.39■■□□□ 1.01
VARS-221ENST00000463184 SEMA4GQ9NTN9 838 aa21.39■■□□□ 1.01
VARS-221ENST00000463184 CYB561D2O14569 222 aa21.38■■□□□ 1.01
VARS-221ENST00000463184 SLC30A4O14863 429 aa21.38■■□□□ 1.01
VARS-221ENST00000463184 TBCAO75347 108 aaKnown RBP21.38■■□□□ 1.01
VARS-221ENST00000463184 ATF6P18850 670 aa21.38■■□□□ 1.01
VARS-221ENST00000463184 ACOT2P49753 483 aa21.38■■□□□ 1.01
VARS-221ENST00000463184 TAF6P49848 677 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms