RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 SRCAPQ6ZRS2 3230 aa17.68■□□□□ 0.42
CCDC43-202ENST00000457422 DCDC2CA8MYV0 355 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 MYO1CO00159 1063 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 IQCF3P0C7M6 154 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 PHKA2P46019 1235 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 ZNF252P-AS1Q0IIN9 211 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 DPY19L2Q6NUT2 758 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 TAPT1Q6NXT6 567 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 DNAJC24Q6P3W2 148 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 WDTC1Q8N5D0 677 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 TFAP2BQ92481 460 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 RBM41Q96IZ5 413 aaKnown RBP17.67■□□□□ 0.42
CCDC43-202ENST00000457422 BCO2Q9BYV7 579 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 CNOT10Q9H9A5 744 aaKnown RBP17.67■□□□□ 0.42
CCDC43-202ENST00000457422 AAASQ9NRG9 546 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 MAGEB2O15479 319 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 LGALS2P05162 132 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 FGFR4P22455 802 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 CETN2P41208 172 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 ZNF792Q3KQV3 632 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 C6orf118Q5T5N4 469 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 ANKS1BQ7Z6G8 1248 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 RCOR2Q8IZ40 523 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 NIPA2Q8N8Q9 360 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 C3orf20Q8ND61 904 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 EMID1Q96A84 441 aaPredicted RBP17.67■□□□□ 0.42
CCDC43-202ENST00000457422 VTA1Q9NP79 307 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 CEP83Q9Y592 693 aa17.67■□□□□ 0.42
CCDC43-202ENST00000457422 COL1A2P08123 1366 aa17.66■□□□□ 0.42
CCDC43-202ENST00000457422 RBM47A0AV96 593 aaKnown RBP17.66■□□□□ 0.42
CCDC43-202ENST00000457422 GPR25O00155 361 aa17.66■□□□□ 0.42
CCDC43-202ENST00000457422 MCF2P10911 925 aa17.66■□□□□ 0.42
CCDC43-202ENST00000457422 INSRRP14616 1297 aa17.66■□□□□ 0.42
CCDC43-202ENST00000457422 TNFAIP2Q03169 654 aa17.66■□□□□ 0.42
CCDC43-202ENST00000457422 NFX1Q12986 1120 aaKnown RBP17.66■□□□□ 0.42
CCDC43-202ENST00000457422 AMHR2Q16671 573 aa17.66■□□□□ 0.42
CCDC43-202ENST00000457422 EAPPQ56P03 285 aaPredicted RBP17.66■□□□□ 0.42
CCDC43-202ENST00000457422 TMEM130Q8N3G9 435 aa17.66■□□□□ 0.42
CCDC43-202ENST00000457422 MCEEQ96PE7 176 aa17.66■□□□□ 0.42
CCDC43-202ENST00000457422 PPP1R16BQ96T49 567 aa17.66■□□□□ 0.42
CCDC43-202ENST00000457422 TRAIPQ9BWF2 469 aa17.66■□□□□ 0.42
CCDC43-202ENST00000457422 FAM107BQ9H098 131 aa17.66■□□□□ 0.42
CCDC43-202ENST00000457422 LHX5Q9H2C1 402 aa17.66■□□□□ 0.42
CCDC43-202ENST00000457422 KLHL11Q9NVR0 708 aa17.66■□□□□ 0.42
CCDC43-202ENST00000457422 SIX4Q9UIU6 781 aa17.66■□□□□ 0.42
CCDC43-202ENST00000457422 STRIP2Q9ULQ0 834 aa17.66■□□□□ 0.42
CCDC43-202ENST00000457422 FAM107AO95990 144 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 GH1P01241 217 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 NFICP08651 508 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 TCF4P15884 667 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 PTPN7P35236 360 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 RAP1GAPP47736 663 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 CCNA1P78396 465 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 PPARDQ03181 441 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 PIGHQ14442 188 aaPredicted RBP17.65■□□□□ 0.42
CCDC43-202ENST00000457422 NLRP14Q86W24 1093 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 ERICH1Q86X53 443 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 GPRC5AQ8NFJ5 357 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 PPTC7Q8NI37 304 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 MYCBPAPQ8TBZ2 947 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 CCDC114Q96M63 670 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 NXF1Q9UBU9 619 aaKnown RBP17.65■□□□□ 0.42
CCDC43-202ENST00000457422 ATXN2Q99700 1313 aaKnown RBP17.65■□□□□ 0.42
CCDC43-202ENST00000457422 CSDE1O75534 798 aaKnown RBP17.65■□□□□ 0.42
CCDC43-202ENST00000457422 AGTP01019 485 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 KRT19P08727 400 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 ATF2P15336 505 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 CORO7P57737 925 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 COPS2P61201 443 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 TNFAIP8L3Q5GJ75 292 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 ZNF667Q5HYK9 610 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 DRICH1Q6PGQ1 229 aaPredicted RBP17.65■□□□□ 0.42
CCDC43-202ENST00000457422 DCUN1D2Q6PH85 259 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 MAMDC4Q6UXC1 1216 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 ILDR2Q71H61 639 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 B4GALNT4Q76KP1 1039 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 CCDC25Q86WR0 208 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 SPATS2Q86XZ4 545 aaKnown RBP17.65■□□□□ 0.42
CCDC43-202ENST00000457422 CCDC89Q8N998 374 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 C1orf127Q8N9H9 656 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 BBOF1Q8ND07 529 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 SLITRK1Q96PX8 696 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 FAM118BQ9BPY3 351 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 ROPN1BQ9BZX4 212 aaPredicted RBP17.65■□□□□ 0.42
CCDC43-202ENST00000457422 CDC42EP4Q9H3Q1 356 aaKnown RBP17.65■□□□□ 0.42
CCDC43-202ENST00000457422 VRTNQ9H8Y1 702 aa17.65■□□□□ 0.42
CCDC43-202ENST00000457422 ROPN1Q9HAT0 212 aaPredicted RBP17.65■□□□□ 0.42
CCDC43-202ENST00000457422 UNCXA6NJT0 531 aa17.64■□□□□ 0.41
CCDC43-202ENST00000457422 MEFVO15553 781 aaPredicted RBP17.64■□□□□ 0.41
CCDC43-202ENST00000457422 MED7O43513 233 aa17.64■□□□□ 0.41
CCDC43-202ENST00000457422 TRAPPC3O43617 180 aa17.64■□□□□ 0.41
CCDC43-202ENST00000457422 ADORA2AP29274 412 aa17.64■□□□□ 0.41
CCDC43-202ENST00000457422 CDR1P51861 262 aa17.64■□□□□ 0.41
CCDC43-202ENST00000457422 GSCP56915 257 aaPredicted RBP17.64■□□□□ 0.41
CCDC43-202ENST00000457422 LACTBP83111 547 aaPredicted RBP17.64■□□□□ 0.41
CCDC43-202ENST00000457422 OGDHQ02218 1023 aa17.64■□□□□ 0.41
CCDC43-202ENST00000457422 TRIP13Q15645 432 aaPredicted RBP17.64■□□□□ 0.41
CCDC43-202ENST00000457422 CYP4A22Q5TCH4 519 aa17.64■□□□□ 0.41
CCDC43-202ENST00000457422 MFSD5Q6N075 450 aa17.64■□□□□ 0.41
CCDC43-202ENST00000457422 DENND1BQ6P3S1 775 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms