RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 ZNF507Q8TCN5 953 aa13.36□□□□□ -0.27
VEGFA-210ENST00000457104 ELSPBP1Q96BH3 223 aa13.36□□□□□ -0.27
VEGFA-210ENST00000457104 ASB16Q96NS5 453 aa13.36□□□□□ -0.27
VEGFA-210ENST00000457104 ZCWPW1Q9H0M4 648 aa13.36□□□□□ -0.27
VEGFA-210ENST00000457104 IRF2BPLQ9H1B7 796 aa13.36□□□□□ -0.27
VEGFA-210ENST00000457104 DLGAP2Q9P1A6 1054 aa13.36□□□□□ -0.27
VEGFA-210ENST00000457104 HSFX1Q9UBD0 423 aa13.36□□□□□ -0.27
VEGFA-210ENST00000457104 DSEQ9UL01 958 aa13.36□□□□□ -0.27
VEGFA-210ENST00000457104 ZDHHC9Q9Y397 364 aa13.36□□□□□ -0.27
VEGFA-210ENST00000457104 PTPRDP23468 1912 aa13.35□□□□□ -0.27
VEGFA-210ENST00000457104 STK25O00506 426 aa13.35□□□□□ -0.27
VEGFA-210ENST00000457104 EIF3DO15371 548 aaKnown RBP eCLIP13.35□□□□□ -0.27
VEGFA-210ENST00000457104 TGFB1I1O43294 461 aa13.35□□□□□ -0.27
VEGFA-210ENST00000457104 SOAT2O75908 522 aa13.35□□□□□ -0.27
VEGFA-210ENST00000457104 ITGB3P05106 788 aa13.35□□□□□ -0.27
VEGFA-210ENST00000457104 MYL4P12829 197 aa13.35□□□□□ -0.27
VEGFA-210ENST00000457104 POLR2BP30876 1174 aaKnown RBP13.35□□□□□ -0.27
VEGFA-210ENST00000457104 CDR1P51861 262 aa13.35□□□□□ -0.27
VEGFA-210ENST00000457104 SNW1Q13573 536 aaKnown RBP13.35□□□□□ -0.27
VEGFA-210ENST00000457104 SV2CQ496J9 727 aa13.35□□□□□ -0.27
VEGFA-210ENST00000457104 SLC44A4Q53GD3 710 aa13.35□□□□□ -0.27
VEGFA-210ENST00000457104 FAM26FQ5R3K3 315 aa13.35□□□□□ -0.27
VEGFA-210ENST00000457104 ARMCX5Q6P1M9 558 aa13.35□□□□□ -0.27
VEGFA-210ENST00000457104 STXBP4Q6ZWJ1 553 aa13.35□□□□□ -0.27
VEGFA-210ENST00000457104 GPD1LQ8N335 351 aa13.35□□□□□ -0.27
VEGFA-210ENST00000457104 LEMD2Q8NC56 503 aa13.35□□□□□ -0.27
VEGFA-210ENST00000457104 SHKBP1Q8TBC3 707 aa13.35□□□□□ -0.27
VEGFA-210ENST00000457104 ATOH1Q92858 354 aaPredicted RBP13.35□□□□□ -0.27
VEGFA-210ENST00000457104 CHAMP1Q96JM3 812 aa13.35□□□□□ -0.27
VEGFA-210ENST00000457104 DDX23Q9BUQ8 820 aaKnown RBP13.35□□□□□ -0.27
VEGFA-210ENST00000457104 MAGEF1Q9HAY2 307 aa13.35□□□□□ -0.27
VEGFA-210ENST00000457104 ASAH2Q9NR71 780 aa13.35□□□□□ -0.27
VEGFA-210ENST00000457104 SIX4Q9UIU6 781 aa13.35□□□□□ -0.27
VEGFA-210ENST00000457104 CFAP45Q9UL16 551 aa13.35□□□□□ -0.27
VEGFA-210ENST00000457104 AGAP1Q9UPQ3 857 aa13.35□□□□□ -0.27
VEGFA-210ENST00000457104 PTPRJQ12913 1337 aa13.35□□□□□ -0.27
VEGFA-210ENST00000457104 ANAPC1Q9H1A4 1944 aa13.35□□□□□ -0.27
VEGFA-210ENST00000457104 ZFHX2Q9C0A1 2572 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-210ENST00000457104 KIAA0391O15091 583 aaKnown RBP13.34□□□□□ -0.27
VEGFA-210ENST00000457104 PNPLA4P41247 253 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 ALDH1A3P47895 512 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 EPHB3P54753 998 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 PLD1Q13393 1074 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 CUL4BQ13620 913 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 TEAD2Q15562 447 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 SLC39A12Q504Y0 691 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 UNC13DQ70J99 1090 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 GAREM2Q75VX8 874 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 DNAJB7Q7Z6W7 309 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-210ENST00000457104 METTL23Q86XA0 190 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 CBWD2Q8IUF1 395 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 GRAMD1CQ8IYS0 662 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 PDCL2Q8N4E4 241 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 CSGALNACT2Q8N6G5 542 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 NOC3LQ8WTT2 800 aaKnown RBP13.34□□□□□ -0.27
VEGFA-210ENST00000457104 CACTINQ8WUQ7 758 aaKnown RBP13.34□□□□□ -0.27
VEGFA-210ENST00000457104 SCFD1Q8WVM8 642 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 PSMG2Q969U7 264 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 ZNF560Q96MR9 790 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 FOXQ1Q9C009 403 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 MTMR12Q9C0I1 747 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 BLZF1Q9H2G9 400 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 TRPV4Q9HBA0 871 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 ZNF334Q9HCZ1 680 aaPredicted RBP13.34□□□□□ -0.27
VEGFA-210ENST00000457104 FAM13BQ9NYF5 915 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 HSPBP1Q9NZL4 362 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 SIT1Q9Y3P8 196 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 DMDP11532 3685 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 NCANO14594 1321 aa13.34□□□□□ -0.27
VEGFA-210ENST00000457104 A0A1W2PRU2 124 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 SHISA7A6NL88 538 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 PROB1E7EW31 1015 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 ACTN4O43707 911 aaKnown RBP13.33□□□□□ -0.28
VEGFA-210ENST00000457104 LRRN2O75325 713 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 DCNP07585 359 aaKnown RBP13.33□□□□□ -0.28
VEGFA-210ENST00000457104 GLULP15104 373 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 ATF6P18850 670 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 VIPR2P41587 438 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 AFMP43652 599 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 PFKPQ01813 784 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 PRKCQQ04759 706 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 ANGPT1Q15389 498 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 MLF2Q15773 248 aaPredicted RBP13.33□□□□□ -0.28
VEGFA-210ENST00000457104 LMBRD2Q68DH5 695 aaPredicted RBP13.33□□□□□ -0.28
VEGFA-210ENST00000457104 VITQ6UXI7 678 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 THEM5Q8N1Q8 247 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 LRRC52Q8N7C0 313 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 PJA1Q8NG27 643 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 OR5B17Q8NGF7 314 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 SMARCD2Q92925 531 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 SHDQ96IW2 340 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 MKNK1Q9BUB5 465 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 ZFP14Q9HCL3 533 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 TMLHEQ9NVH6 421 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 INTS13Q9NVM9 706 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 GDAP2Q9NXN4 497 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 ITGA11Q9UKX5 1188 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 L1RE1Q9UN81 338 aa13.33□□□□□ -0.28
VEGFA-210ENST00000457104 MTF2Q9Y483 593 aaPredicted RBP13.33□□□□□ -0.28
VEGFA-210ENST00000457104 ASB3Q9Y575 518 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms