RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 CCNJLQ8IV13 435 aa14.45□□□□□ -0.1
PTPRE-204ENST00000455661 ALLCQ8N6M5 410 aa14.45□□□□□ -0.1
PTPRE-204ENST00000455661 SMC1BQ8NDV3 1235 aa14.45□□□□□ -0.1
PTPRE-204ENST00000455661 GMCL1P1Q8NEA9 526 aa14.45□□□□□ -0.1
PTPRE-204ENST00000455661 CCDC110Q8TBZ0 833 aa14.45□□□□□ -0.1
PTPRE-204ENST00000455661 ARHGEF1Q92888 912 aaKnown RBP14.45□□□□□ -0.1
PTPRE-204ENST00000455661 SKA1Q96BD8 255 aa14.45□□□□□ -0.1
PTPRE-204ENST00000455661 RANBP17Q9H2T7 1088 aaKnown RBP14.45□□□□□ -0.1
PTPRE-204ENST00000455661 PCMTD2Q9NV79 361 aa14.45□□□□□ -0.1
PTPRE-204ENST00000455661 IRAK4Q9NWZ3 460 aa14.45□□□□□ -0.1
PTPRE-204ENST00000455661 DDX43Q9NXZ2 648 aaKnown RBP14.45□□□□□ -0.1
PTPRE-204ENST00000455661 POLLQ9UGP5 575 aa14.45□□□□□ -0.1
PTPRE-204ENST00000455661 DNPEPQ9ULA0 475 aa14.45□□□□□ -0.1
PTPRE-204ENST00000455661 F8W8V4 182 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 LYNP07948 512 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 UBTFL6P0CB48 400 aaPredicted RBP14.44□□□□□ -0.1
PTPRE-204ENST00000455661 SLURP2P0DP57 97 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 NOP14P78316 857 aaKnown RBP14.44□□□□□ -0.1
PTPRE-204ENST00000455661 GTF2BQ00403 316 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 NFX1Q12986 1120 aaKnown RBP14.44□□□□□ -0.1
PTPRE-204ENST00000455661 KLHL38Q2WGJ6 581 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 CEP55Q53EZ4 464 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 KAZNQ674X7 775 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 CBWD2Q8IUF1 395 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 RCOR2Q8IZ40 523 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 RBM41Q96IZ5 413 aaKnown RBP14.44□□□□□ -0.1
PTPRE-204ENST00000455661 KRT82Q9NSB4 513 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 EXOC7Q9UPT5 735 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 SHOC2Q9UQ13 582 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 CIB2O75838 187 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 NDUFB10O96000 172 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 POLR2MP0CAP2 368 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 RARBP10826 455 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 BPIFB4P59827 614 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 WDR72Q3MJ13 1102 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 ADGRD1Q6QNK2 874 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 PCGF5Q86SE9 256 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 LRRC6Q86X45 466 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 ANKMY2Q8IV38 441 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 GLIS1Q8NBF1 620 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 TAS1R2Q8TE23 839 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 RBM17Q96I25 401 aaKnown RBP14.44□□□□□ -0.1
PTPRE-204ENST00000455661 CENPKQ9BS16 269 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 FBXO6Q9NRD1 293 aaPredicted RBP14.44□□□□□ -0.1
PTPRE-204ENST00000455661 RABGEF1Q9UJ41 708 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 DRG1Q9Y295 367 aaKnown RBP14.44□□□□□ -0.1
PTPRE-204ENST00000455661 PCDHB2Q9Y5E7 798 aa14.44□□□□□ -0.1
PTPRE-204ENST00000455661 MAGEC1O60732 1142 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 SCNN1DP51172 638 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 RAP1GDS1P52306 607 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 HSPA2P54652 639 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 UBXN2AP68543 259 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 DSG1Q02413 1049 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 HIF1AQ16665 826 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 RNASEH2BQ5TBB1 312 aaKnown RBP14.43□□□□□ -0.1
PTPRE-204ENST00000455661 TMEM179Q6ZVK1 233 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 ZNF276Q8N554 614 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 BANPQ8N9N5 519 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 ATP11CQ8NB49 1132 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 PYROXD1Q8WU10 500 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 FAM161BQ96MY7 647 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 ASCC2Q9H1I8 757 aaPredicted RBP14.43□□□□□ -0.1
PTPRE-204ENST00000455661 IL1RAPL1Q9NZN1 696 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 SLC4A7Q9Y6M7 1214 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 MYPNQ86TC9 1320 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 LOXHD1Q8IVV2 1947 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 ZNFX1Q9P2E3 1918 aaKnown RBP14.43□□□□□ -0.1
PTPRE-204ENST00000455661 SMAPO00193 183 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 CALCAP01258 141 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 ETS1P14921 441 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 ATF7P17544 494 aaPredicted RBP14.43□□□□□ -0.1
PTPRE-204ENST00000455661 GTF2H1P32780 548 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 PSMC4P43686 418 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 SH3BGRP55822 239 aaPredicted RBP14.43□□□□□ -0.1
PTPRE-204ENST00000455661 GCNT1Q02742 428 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 SHROOM1Q2M3G4 852 aaPredicted RBP14.43□□□□□ -0.1
PTPRE-204ENST00000455661 C2CD6Q53TS8 623 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 MIER3Q7Z3K6 550 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 TMPRSS6Q8IU80 811 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 SIAH1Q8IUQ4 282 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.43□□□□□ -0.1
PTPRE-204ENST00000455661 FAM210AQ96ND0 272 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 PAFAH2Q99487 392 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 ZCWPW1Q9H0M4 648 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 KCNK13Q9HB14 408 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 KCNQ5Q9NR82 932 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 SLC17A7Q9P2U7 560 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 SCINQ9Y6U3 715 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 WASF2Q9Y6W5 498 aa14.43□□□□□ -0.1
PTPRE-204ENST00000455661 IPO5O00410 1097 aaKnown RBP14.42□□□□□ -0.1
PTPRE-204ENST00000455661 SLC16A4O15374 487 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 LPXNO60711 386 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 BBOX1O75936 387 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 ZCCHC18P0CG32 403 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 ARP10275 920 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 KRT10P13645 584 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 GPX6P59796 221 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 MCCD1P59942 119 aaPredicted RBP14.42□□□□□ -0.1
PTPRE-204ENST00000455661 AP2B1P63010 937 aa14.42□□□□□ -0.1
PTPRE-204ENST00000455661 NFIAQ12857 509 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms