RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 A0A0B4J269 797 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 A0A1W2PPM1 405 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 SPATA31C2B4DYI2 1134 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 MAFGO15525 162 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 OATP04181 439 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 KRT16P08779 473 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 MMP8P22894 467 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 GCAP28676 217 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 MCCD1P59942 119 aaPredicted RBP14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 TFAMQ00059 246 aaKnown RBP14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 CAV1Q03135 178 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 TNFAIP1Q13829 316 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 WDR72Q3MJ13 1102 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 GNPTABQ3T906 1256 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 DNAJC24Q6P3W2 148 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 ARHGEF18Q6ZSZ5 1173 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 REPS2Q8NFH8 660 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 TFAP2BQ92481 460 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 STAMBPL1Q96FJ0 436 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 KIAA1586Q9HCI6 787 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 NXF1Q9UBU9 619 aaKnown RBP14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 ARL2BPQ9Y2Y0 163 aa14.32□□□□□ -0.12
HERPUD1-204ENST00000439977 WDR91A4D1P6 747 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 TMEM191CA6NGB0 347 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 DKC1O60832 514 aaKnown RBP eCLIP14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 ECM2O94769 699 aaPredicted RBP14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 GJB1P08034 283 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 TMEM191BP0C7N4 346 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 TAC1P20366 129 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 EFTUD2Q15029 972 aaKnown RBP eCLIP14.31□□□□□ -0.128e-9■■■■□ 19.7
HERPUD1-204ENST00000439977 PREPLQ4J6C6 727 aaPredicted RBP14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 PHF13Q86YI8 300 aaPredicted RBP14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 LRRC71Q8N4P6 559 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 IMPG2Q9BZV3 1241 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 RPA3P35244 121 aaPredicted RBP14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 PDIA2Q13087 525 aaKnown RBP14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 CAPSQ13938 189 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 ECHDC2Q86YB7 292 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 ANKRD35Q8N283 1001 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 ZCCHC9Q8N567 271 aaKnown RBP14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 EMC1Q8N766 993 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 PRPF31Q8WWY3 499 aaKnown RBP14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 MAML1Q92585 1016 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 KLF6Q99612 283 aaPredicted RBP14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 IP6K2Q9UHH9 426 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 GRID1Q9ULK0 1009 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 SCINQ9Y6U3 715 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 CENPFP49454 3210 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 FAM47DPA6NHR8 397 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 GOLGA8RI6L899 631 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 ITGBL1O95965 494 aaPredicted RBP14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 CD19P15391 556 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 NQO1P15559 274 aaKnown RBP14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 GMPSP49915 693 aaPredicted RBP14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 COPS2P61201 443 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 IRX3P78415 501 aaPredicted RBP14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 STAT4Q14765 748 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 SPOCD1Q6ZMY3 1216 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 DPH6Q7L8W6 267 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 TRIM50Q86XT4 487 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 THNSL1Q8IYQ7 743 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 WDTC1Q8N5D0 677 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 GIMAP7Q8NHV1 300 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 CGRRF1Q99675 332 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 TEX13BQ9BXU2 312 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 DHX33Q9H6R0 707 aaKnown RBP14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 ACAD9Q9H845 621 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 CISHQ9NSE2 258 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 KLHL14Q9P2G3 628 aa14.31□□□□□ -0.12
HERPUD1-204ENST00000439977 TJP3O95049 919 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 CETN2P41208 172 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 RAP1GAPP47736 663 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 GDF10P55107 478 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 RTP1P59025 263 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 C1QBPQ07021 282 aaKnown RBP14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 RCOR2Q8IZ40 523 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 CEP120Q8N960 986 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 ANKLE1Q8NAG6 615 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 AGAP11Q8TF27 550 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 TRABDQ9H4I3 376 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 DOCK5Q9H7D0 1870 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 PCSK1NQ9UHG2 260 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 AGTPBP1Q9UPW5 1226 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 PIK3R2O00459 728 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 DNALI1O14645 258 aaPredicted RBP14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 CSDE1O75534 798 aaKnown RBP14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 GSTA1P08263 222 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 EZRP15311 586 aaKnown RBP14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 CA4P22748 312 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 SSTR1P30872 391 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 RFC1P35251 1148 aaPredicted RBP14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 NAMPTP43490 491 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 CDH8P55286 799 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 MYO1EQ12965 1108 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 BNIP1Q12981 228 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 SCYL3Q8IZE3 742 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 N4BP2L2Q92802 583 aaPredicted RBP14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 MAGEB18Q96M61 343 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 TMEM237Q96Q45 408 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms