RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 MYL7Q01449 175 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 TRIP13Q15645 432 aaPredicted RBP9.06□□□□□ -0.96
HPS4-206ENST00000439453 KHDC1Q4VXA5 237 aaKnown RBP9.06□□□□□ -0.96
HPS4-206ENST00000439453 PHLDB3Q6NSJ2 640 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 ZNF746Q6NUN9 644 aaPredicted RBP9.06□□□□□ -0.96
HPS4-206ENST00000439453 RPUSD2Q8IZ73 545 aaKnown RBP9.06□□□□□ -0.96
HPS4-206ENST00000439453 C10orf82Q8WW14 230 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 ITFG2Q969R8 447 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 BTBD6Q96KE9 485 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 ANAPC5Q9UJX4 755 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 SFI1A8K8P3 1242 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 ATMINO43313 823 aaPredicted RBP9.06□□□□□ -0.96
HPS4-206ENST00000439453 RAD21O60216 631 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 RPA1P27694 616 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 CAV1Q03135 178 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 SPIRE1Q08AE8 756 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 IRF5Q13568 498 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 CUL3Q13618 768 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 PTK6Q13882 451 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 STAT4Q14765 748 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 TAF1BQ53T94 588 aaPredicted RBP9.06□□□□□ -0.96
HPS4-206ENST00000439453 FOXB2Q5VYV0 432 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 RFWD3Q6PCD5 774 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 C4orf50Q6ZRC1 276 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 FAM160B2Q86V87 743 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 CFAP61Q8NHU2 1237 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 EZH1Q92800 747 aaPredicted RBP9.06□□□□□ -0.96
HPS4-206ENST00000439453 BICD1Q96G01 975 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 AGBL1Q96MI9 1066 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 EPAS1Q99814 870 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 MKNK1Q9BUB5 465 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 ZCWPW1Q9H0M4 648 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 EURLQ9NYK6 297 aa9.06□□□□□ -0.96
HPS4-206ENST00000439453 FSCN2O14926 492 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 EDF1O60869 148 aaKnown RBP9.05□□□□□ -0.96
HPS4-206ENST00000439453 ATP9AO75110 1047 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 SKIP12755 728 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 ATF2P15336 505 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 FLT3LGP49771 235 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 SPARCL1Q14515 664 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 SPDYAQ5MJ70 313 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 SNX30Q5VWJ9 437 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 RGS9BPQ6ZS82 235 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 PRUNE1Q86TP1 453 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 NPLOC4Q8TAT6 608 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 MAML1Q92585 1016 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 ARMC5Q96C12 935 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 TRAIPQ9BWF2 469 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 RAVER2Q9HCJ3 691 aaKnown RBP9.05□□□□□ -0.96
HPS4-206ENST00000439453 DNAJC25-GNG10A0A024R161 153 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 CYP3A7-CYP3A51PA0A087WV96 503 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 A0A1B0GVG6 124 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 SORBS3O60504 671 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 CYP3A7P24462 503 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 MAPK4P31152 587 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 OAZ1P54368 228 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 OCRLQ01968 901 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 PKN2Q16513 984 aaKnown RBP9.05□□□□□ -0.96
HPS4-206ENST00000439453 NFIL3Q16649 462 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 SYDE2Q5VT97 1194 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 USP17L6PQ6QN14 398 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 SYDE1Q6ZW31 735 aaPredicted RBP9.05□□□□□ -0.96
HPS4-206ENST00000439453 B4GALNT2Q8NHY0 566 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 DENND1AQ8TEH3 1009 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 SCG3Q8WXD2 468 aaKnown RBP9.05□□□□□ -0.96
HPS4-206ENST00000439453 BHMT2Q9H2M3 363 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 CHST7Q9NS84 486 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 LNPEPQ9UIQ6 1025 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 ZFP69BQ9UJL9 534 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 DOCK5Q9H7D0 1870 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 EIF3DO15371 548 aaKnown RBP eCLIP9.05□□□□□ -0.96
HPS4-206ENST00000439453 NMT1P30419 496 aaKnown RBP9.05□□□□□ -0.96
HPS4-206ENST00000439453 ADCY8P40145 1251 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 CYP2J2P51589 502 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 CDR2Q01850 454 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 TRIM32Q13049 653 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 RCN1Q15293 331 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 CCL14Q16627 93 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 TBC1D25Q3MII6 688 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 ZC2HC1CQ53FD0 456 aaPredicted RBP9.05□□□□□ -0.96
HPS4-206ENST00000439453 ARHGAP22Q7Z5H3 698 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 ZNF564Q8TBZ8 553 aaPredicted RBP9.05□□□□□ -0.96
HPS4-206ENST00000439453 NRG4Q8WWG1 115 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 PSPC1Q8WXF1 523 aaKnown RBP9.05□□□□□ -0.96
HPS4-206ENST00000439453 CLEC4DQ8WXI8 215 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 ATG4AQ8WYN0 398 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 PCDHB18PQ96TA0 734 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 MIPEPQ99797 713 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 NUP85Q9BW27 656 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 PPP1R12CQ9BZL4 782 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 UBE2TQ9NPD8 197 aaPredicted RBP9.05□□□□□ -0.96
HPS4-206ENST00000439453 OLFML3Q9NRN5 406 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 PCMTD2Q9NV79 361 aa9.05□□□□□ -0.96
HPS4-206ENST00000439453 GAP43P17677 238 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 MUTP22033 750 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 RFX1P22670 979 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 CACNA2D1P54289 1103 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 PDK4Q16654 411 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 SLC45A4Q5BKX6 768 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 PLEKHH3Q7Z736 793 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms