RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 SCN1AP35498 2009 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 CLCN4P51793 760 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 GPR17Q13304 367 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 BIRC3Q13489 604 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 ADGRE1Q14246 886 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 VWA3BQ502W6 1294 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 RDH13Q8NBN7 331 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 LEMD2Q8NC56 503 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 EHBP1Q8NDI1 1231 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 PAAF1Q9BRP4 392 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 ZMYM5Q9UJ78 669 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 FBXW11Q9UKB1 542 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 FAM50BQ9Y247 325 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 NFE2L3Q9Y4A8 694 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 ATP8B3O60423 1300 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 PLXNA3P51805 1871 aa12.3□□□□□ -0.44
SNHG3-202ENST00000437681 KCNJ18B7U540 433 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 MICAL2O94851 1124 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 FGF19O95750 216 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 MAGEA11P43364 429 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 KCNH2Q12809 1159 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 KCNJ12Q14500 433 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 NCAPHQ15003 741 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 AAK1Q2M2I8 961 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 DNTTIP2Q5QJE6 756 aaKnown RBP12.29□□□□□ -0.44
SNHG3-202ENST00000437681 ISM2Q6H9L7 571 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 OVOS1Q6IE37 1185 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 TCEAL8Q8IYN2 117 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 FAM200AQ8TCP9 573 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 PPP1R9BQ96SB3 815 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 TLE6Q9H808 572 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 GOLGA2P5Q9HBQ8 144 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 PLCB1Q9NQ66 1216 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 CEP72Q9P209 647 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 TKTP29401 623 aaKnown RBP12.29□□□□□ -0.44
SNHG3-202ENST00000437681 DLG4P78352 724 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 TSPY1Q01534 308 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 ITIH3Q06033 890 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 IQCB1Q15051 598 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 ANO6Q4KMQ2 910 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 GBP6Q6ZN66 633 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 PDCL2Q8N4E4 241 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 SPPL2BQ8TCT7 592 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 RIN2Q8WYP3 895 aaPredicted RBP12.29□□□□□ -0.44
SNHG3-202ENST00000437681 SFXN1Q9H9B4 322 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 PCDH10Q9P2E7 1040 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 CNTN6Q9UQ52 1028 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 ASB3Q9Y575 518 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 DENND4AQ7Z401 1863 aa12.29□□□□□ -0.44
SNHG3-202ENST00000437681 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.28□□□□□ -0.44
SNHG3-202ENST00000437681 NT5C1B-RDH14C9J2C7 533 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 DYNC1I1O14576 645 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 SPTLC1O15269 473 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 MSNP26038 577 aaKnown RBP12.28□□□□□ -0.44
SNHG3-202ENST00000437681 ZNF165P49910 485 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 CCDC173Q0VFZ6 552 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 HYAL1Q12794 435 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 RTP2Q5QGT7 225 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 FAM171BQ6P995 826 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 C11orf57Q6ZUT1 292 aaPredicted RBP12.28□□□□□ -0.44
SNHG3-202ENST00000437681 ADGRF2Q8IZF7 708 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 CRYBG2Q8N1P7 616 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 UBR7Q8N806 425 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 ZNF461Q8TAF7 563 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 TNIP3Q96KP6 325 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 PKMYT1Q99640 499 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 TUBGCP2Q9BSJ2 902 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 SH3BP1Q9Y3L3 701 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 PATJQ8NI35 1801 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 PTPRDP23468 1912 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 GLUD1P00367 558 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 IBSPP21815 317 aaPredicted RBP12.28□□□□□ -0.44
SNHG3-202ENST00000437681 MTIF2P46199 727 aaKnown RBP12.28□□□□□ -0.44
SNHG3-202ENST00000437681 BRCC3P46736 316 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 STX17P56962 302 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 MYL6P60660 151 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 STILQ15468 1287 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 LEXMQ3ZCV2 418 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 CTXN3Q4LDR2 81 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 TCEAL5Q5H9L2 206 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 DHX40Q8IX18 779 aaKnown RBP12.28□□□□□ -0.44
SNHG3-202ENST00000437681 LMO3Q8TAP4 145 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 MYLIPQ8WY64 445 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 NECTIN4Q96NY8 510 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 NT5C1BQ96P26 610 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 CLSTN3Q9BQT9 956 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 UBXN6Q9BZV1 441 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 EHD2Q9NZN4 543 aa12.28□□□□□ -0.44
SNHG3-202ENST00000437681 CST3P01034 146 aaPredicted RBP12.27□□□□□ -0.44
SNHG3-202ENST00000437681 KRT19P08727 400 aa12.27□□□□□ -0.44
SNHG3-202ENST00000437681 CNPP09543 421 aaKnown RBP12.27□□□□□ -0.44
SNHG3-202ENST00000437681 GCLMP48507 274 aa12.27□□□□□ -0.44
SNHG3-202ENST00000437681 NOP14P78316 857 aaKnown RBP12.27□□□□□ -0.44
SNHG3-202ENST00000437681 SOWAHAQ2M3V2 549 aa12.27□□□□□ -0.44
SNHG3-202ENST00000437681 INTS6LQ5JSJ4 861 aaKnown RBP12.27□□□□□ -0.44
SNHG3-202ENST00000437681 PLPP4Q5VZY2 271 aa12.27□□□□□ -0.44
SNHG3-202ENST00000437681 ANKRD54Q6NXT1 300 aa12.27□□□□□ -0.44
SNHG3-202ENST00000437681 C4orf50Q6ZRC1 276 aa12.27□□□□□ -0.44
SNHG3-202ENST00000437681 VN1R2Q8NFZ6 395 aa12.27□□□□□ -0.44
SNHG3-202ENST00000437681 POP1Q99575 1024 aaKnown RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms