RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 VSTM4Q8IW00 320 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 GPR65Q8IYL9 337 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 SIX5Q8N196 739 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 LNX1Q8TBB1 728 aaPredicted RBP11.81□□□□□ -0.52
HMGCL-204ENST00000436439 BICD1Q96G01 975 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 CBWD1Q9BRT8 395 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 PRKD2Q9BZL6 878 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 VPS16Q9H269 839 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 KIAA1586Q9HCI6 787 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 ZDHHC7Q9NXF8 308 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 TAB2Q9NYJ8 693 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 HSPBP1Q9NZL4 362 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 IGSF9Q9P2J2 1179 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 EPS15L1Q9UBC2 864 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 DPP7Q9UHL4 492 aa11.81□□□□□ -0.52
HMGCL-204ENST00000436439 A0A1W2PQC6 194 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 KRBA1A5PL33 1030 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 TISP43B9A030 160 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 EXOC3O60645 756 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 ZMYND10O75800 440 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 LDHAP00338 332 aaKnown RBP11.8□□□□□ -0.52
HMGCL-204ENST00000436439 C1RP00736 705 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 CFHP08603 1231 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 AOC1P19801 751 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 PROZP22891 400 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 CASP4P49662 377 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 PSMD5Q16401 504 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 GLRA4Q5JXX5 417 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 CEP135Q66GS9 1140 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 CD300LGQ6UXG3 332 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 INTS8Q75QN2 995 aaKnown RBP11.8□□□□□ -0.52
HMGCL-204ENST00000436439 GET4Q7L5D6 327 aaPredicted RBP11.8□□□□□ -0.52
HMGCL-204ENST00000436439 ASCL5Q7RTU5 278 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 FAM186BQ8IYM0 893 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 SLC44A3Q8N4M1 653 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 CEP120Q8N960 986 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 CCDC150Q8NCX0 1101 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 PIK3R5Q8WYR1 880 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 ERGIC2Q96RQ1 377 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 ACO2Q99798 780 aaKnown RBP11.8□□□□□ -0.52
HMGCL-204ENST00000436439 ADPGKQ9BRR6 497 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 TTPALQ9BTX7 342 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 IRF2BPLQ9H1B7 796 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 NDST4Q9H3R1 872 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 PIDD1Q9HB75 910 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 GOLGA2P5Q9HBQ8 144 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 FBXW11Q9UKB1 542 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 PYCARDQ9ULZ3 195 aa11.8□□□□□ -0.52
HMGCL-204ENST00000436439 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.8□□□□□ -0.52
HMGCL-204ENST00000436439 A0A0B4J269 797 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 PROB1E7EW31 1015 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 ABLIM1O14639 778 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 TEX33O43247 280 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 LAMP2P13473 410 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 CYP2J2P51589 502 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 NTHL1P78549 312 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 MCL1Q07820 350 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 BFSP1Q12934 665 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 ATF7IP2Q5U623 682 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 SPECC1LQ69YQ0 1117 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 ELMSAN1Q6PJG2 1045 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 GRASPQ7Z6J2 395 aaPredicted RBP11.79□□□□□ -0.52
HMGCL-204ENST00000436439 CREBRFQ8IUR6 639 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 LRRC8AQ8IWT6 810 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 GPD1LQ8N335 351 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 POMGNT1Q8WZA1 660 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 SLC35C1Q96A29 364 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 PPP1R10Q96QC0 940 aaKnown RBP11.79□□□□□ -0.52
HMGCL-204ENST00000436439 TARS2Q9BW92 718 aaKnown RBP11.79□□□□□ -0.52
HMGCL-204ENST00000436439 PTPRHQ9HD43 1115 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 FBXL21Q9UKT6 434 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 CA14Q9ULX7 337 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 TNFSF13BQ9Y275 285 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 VPS13AQ96RL7 3174 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 MIA3Q5JRA6 1907 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 GTPBP10A4D1E9 387 aaKnown RBP11.79□□□□□ -0.52
HMGCL-204ENST00000436439 CLDN3O15551 220 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 EXTL3O43909 919 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 NBL1P41271 181 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 CLCNKBP51801 687 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 POU5F1Q01860 360 aaKnown RBP11.79□□□□□ -0.52
HMGCL-204ENST00000436439 CREMQ03060 361 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 UBXN1Q04323 297 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 SOX4Q06945 474 aaPredicted RBP11.79□□□□□ -0.52
HMGCL-204ENST00000436439 TBX2Q13207 712 aaPredicted RBP11.79□□□□□ -0.52
HMGCL-204ENST00000436439 SNRNP35Q16560 246 aaKnown RBP11.79□□□□□ -0.52
HMGCL-204ENST00000436439 DCAF4L1Q3SXM0 396 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 FKBP15Q5T1M5 1219 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 MPZL3Q6UWV2 235 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 RSPO2Q6UXX9 243 aaPredicted RBP11.79□□□□□ -0.52
HMGCL-204ENST00000436439 C3orf58Q8NDZ4 430 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 TMC2Q8TDI7 906 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 CACTINQ8WUQ7 758 aaKnown RBP11.79□□□□□ -0.52
HMGCL-204ENST00000436439 IQCDQ96DY2 449 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 RPP25Q9BUL9 199 aaKnown RBP11.79□□□□□ -0.52
HMGCL-204ENST00000436439 HAPLN2Q9GZV7 340 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 PCIF1Q9H4Z3 704 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 WNT16Q9UBV4 365 aa11.79□□□□□ -0.52
HMGCL-204ENST00000436439 AGO2Q9UKV8 859 aaKnown RBP11.79□□□□□ -0.52
HMGCL-204ENST00000436439 CFAP54Q96N23 3096 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms