RNA–Protein interactions for RNA: ENST00000433027.5

RBM39-213, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-213ENST00000433027 POLIQ9UNA4 740 aa16.4■□□□□ 0.22
RBM39-213ENST00000433027 CEP83Q9Y592 693 aa16.4■□□□□ 0.22
RBM39-213ENST00000433027 CASTOR2A6NHX0 329 aa16.39■□□□□ 0.21
RBM39-213ENST00000433027 TBKBP1A7MCY6 615 aa16.39■□□□□ 0.21
RBM39-213ENST00000433027 ESPNB1AK53 854 aa16.39■□□□□ 0.21
RBM39-213ENST00000433027 PPEF2O14830 753 aa16.39■□□□□ 0.21
RBM39-213ENST00000433027 GNL1P36915 607 aaPredicted RBP16.39■□□□□ 0.21
RBM39-213ENST00000433027 RAD23BP54727 409 aa16.39■□□□□ 0.21
RBM39-213ENST00000433027 ALKBH5Q6P6C2 394 aaKnown RBP16.39■□□□□ 0.21
RBM39-213ENST00000433027 DSTYKQ6XUX3 929 aa16.39■□□□□ 0.21
RBM39-213ENST00000433027 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.39■□□□□ 0.216e-19■■■■■ 56.7
RBM39-213ENST00000433027 SLC47A2Q86VL8 602 aa16.39■□□□□ 0.21
RBM39-213ENST00000433027 GPR65Q8IYL9 337 aa16.39■□□□□ 0.21
RBM39-213ENST00000433027 ADGRF2Q8IZF7 708 aa16.39■□□□□ 0.21
RBM39-213ENST00000433027 CCAR2Q8N163 923 aaKnown RBP16.39■□□□□ 0.21
RBM39-213ENST00000433027 BADQ92934 168 aa16.39■□□□□ 0.21
RBM39-213ENST00000433027 TRIM11Q96F44 468 aa16.39■□□□□ 0.21
RBM39-213ENST00000433027 VCPIP1Q96JH7 1222 aa16.39■□□□□ 0.21
RBM39-213ENST00000433027 NRDE2Q9H7Z3 1164 aa16.39■□□□□ 0.21
RBM39-213ENST00000433027 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.39■□□□□ 0.21
RBM39-213ENST00000433027 NAGPAQ9UK23 515 aa16.39■□□□□ 0.21
RBM39-213ENST00000433027 NENFQ9UMX5 172 aa16.39■□□□□ 0.21
RBM39-213ENST00000433027 PCDHB8Q9UN66 801 aa16.39■□□□□ 0.21
RBM39-213ENST00000433027 STXBP5LQ9Y2K9 1186 aa16.39■□□□□ 0.21
RBM39-213ENST00000433027 FAN1Q9Y2M0 1017 aa16.39■□□□□ 0.21
RBM39-213ENST00000433027 PPP2R2CQ9Y2T4 447 aa16.39■□□□□ 0.21
RBM39-213ENST00000433027 BTNL10A8MVZ5 291 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 KIF2AO00139 706 aaPredicted RBP16.38■□□□□ 0.21
RBM39-213ENST00000433027 SPTLC1O15269 473 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 PJA2O43164 708 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 KRT86O43790 486 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 ZNF500O60304 480 aaPredicted RBP16.38■□□□□ 0.21
RBM39-213ENST00000433027 DDHD2O94830 711 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 LAG3P18627 525 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 CD58P19256 250 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 CDH5P33151 784 aaPredicted RBP16.38■□□□□ 0.21
RBM39-213ENST00000433027 ALDH7A1P49419 539 aaKnown RBP16.38■□□□□ 0.21
RBM39-213ENST00000433027 VAV2P52735 878 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 NDST1P52848 882 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 MAPRE1Q15691 268 aaKnown RBP16.38■□□□□ 0.21
RBM39-213ENST00000433027 CNGA2Q16280 664 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 SGO2Q562F6 1265 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 TMEM240Q5SV17 173 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 SCARA5Q6ZMJ2 495 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 NOP9Q86U38 636 aaKnown RBP16.38■□□□□ 0.21
RBM39-213ENST00000433027 PDCL2Q8N4E4 241 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 SLC4A11Q8NBS3 891 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 WHAMMQ8TF30 809 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 KBTBD7Q8WVZ9 684 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 ZNF606Q8WXB4 792 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.38■□□□□ 0.212e-6■□□□□ 8.8
RBM39-213ENST00000433027 MIS12Q9H081 205 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 SDCBP2Q9H190 292 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.38■□□□□ 0.211e-6■□□□□ 8.1
RBM39-213ENST00000433027 AAASQ9NRG9 546 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 MYO1AQ9UBC5 1043 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 ADAM28Q9UKQ2 775 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 PYCARDQ9ULZ3 195 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 L1RE1Q9UN81 338 aa16.38■□□□□ 0.21
RBM39-213ENST00000433027 SF3B1O75533 1304 aaKnown RBP eCLIP16.38■□□□□ 0.211e-6■■■□□ 14.6
RBM39-213ENST00000433027 A0A087X0T9 212 aa16.37■□□□□ 0.21
RBM39-213ENST00000433027 DDX3XO00571 662 aaKnown RBP eCLIP16.37■□□□□ 0.211e-17■□□□□ 11
RBM39-213ENST00000433027 RTN2O75298 545 aa16.37■□□□□ 0.21
RBM39-213ENST00000433027 CYP1A1P04798 512 aaPredicted RBP16.37■□□□□ 0.21
RBM39-213ENST00000433027 PLEKP08567 350 aaPredicted RBP16.37■□□□□ 0.21
RBM39-213ENST00000433027 FAM228BP0C875 321 aa16.37■□□□□ 0.21
RBM39-213ENST00000433027 MYBL1P10243 752 aa16.37■□□□□ 0.21
RBM39-213ENST00000433027 PPM1AP35813 382 aa16.37■□□□□ 0.21
RBM39-213ENST00000433027 SNX16P57768 344 aa16.37■□□□□ 0.21
RBM39-213ENST00000433027 HTRA4P83105 476 aaPredicted RBP16.37■□□□□ 0.21
RBM39-213ENST00000433027 FMO1Q01740 532 aa16.37■□□□□ 0.21
RBM39-213ENST00000433027 TIGD5Q53EQ6 642 aa16.37■□□□□ 0.21
RBM39-213ENST00000433027 ARHGAP17Q68EM7 881 aa16.37■□□□□ 0.21
RBM39-213ENST00000433027 SCARA3Q6AZY7 606 aa16.37■□□□□ 0.21
RBM39-213ENST00000433027 ZNF365Q70YC5 407 aa16.37■□□□□ 0.21
RBM39-213ENST00000433027 ZNF280BQ86YH2 543 aa16.37■□□□□ 0.21
RBM39-213ENST00000433027 THEM5Q8N1Q8 247 aa16.37■□□□□ 0.21
RBM39-213ENST00000433027 MSANTD4Q8NCY6 345 aa16.37■□□□□ 0.21
RBM39-213ENST00000433027 OR6B3Q8NGW1 331 aa16.37■□□□□ 0.21
RBM39-213ENST00000433027 ACBD6Q9BR61 282 aa16.37■□□□□ 0.21
RBM39-213ENST00000433027 ISCUQ9H1K1 167 aa16.37■□□□□ 0.21
RBM39-213ENST00000433027 SPTLC3Q9NUV7 552 aa16.37■□□□□ 0.21
RBM39-213ENST00000433027 CDH9Q9ULB4 789 aa16.37■□□□□ 0.21
RBM39-213ENST00000433027 INSL6Q9Y581 213 aa16.37■□□□□ 0.21
RBM39-213ENST00000433027 PCDHA13Q9Y5I0 950 aa16.37■□□□□ 0.21
RBM39-213ENST00000433027 A0A0A6YYK5 440 aaPredicted RBP16.36■□□□□ 0.21
RBM39-213ENST00000433027 ANKRD62A6NC57 917 aa16.36■□□□□ 0.21
RBM39-213ENST00000433027 A8MXQ7 604 aa16.36■□□□□ 0.21
RBM39-213ENST00000433027 NRP1O14786 923 aa16.36■□□□□ 0.21
RBM39-213ENST00000433027 THAP12O43422 761 aa16.36■□□□□ 0.21
RBM39-213ENST00000433027 TADA2AO75478 443 aa16.36■□□□□ 0.21
RBM39-213ENST00000433027 OAZ2O95190 189 aa16.36■□□□□ 0.21
RBM39-213ENST00000433027 GJB5O95377 273 aa16.36■□□□□ 0.21
RBM39-213ENST00000433027 GALTP07902 379 aa16.36■□□□□ 0.21
RBM39-213ENST00000433027 PNMA6AP0CW24 399 aaPredicted RBP16.36■□□□□ 0.21
RBM39-213ENST00000433027 SETSIPP0DME0 302 aa16.36■□□□□ 0.21
RBM39-213ENST00000433027 MAGEA1P43355 309 aa16.36■□□□□ 0.21
RBM39-213ENST00000433027 OR1G1P47890 313 aa16.36■□□□□ 0.21
RBM39-213ENST00000433027 CDH8P55286 799 aa16.36■□□□□ 0.21
RBM39-213ENST00000433027 SMARCB1Q12824 385 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms