RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 TCRBV7S2A1N4TA0A589 114 aa17.71■□□□□ 0.42
USHBP1-203ENST00000431146 O00370 1275 aa17.71■□□□□ 0.42
USHBP1-203ENST00000431146 CILPO75339 1184 aa17.71■□□□□ 0.42
USHBP1-203ENST00000431146 GNAT1P11488 350 aa17.71■□□□□ 0.42
USHBP1-203ENST00000431146 CCND3P30281 292 aaPredicted RBP17.71■□□□□ 0.42
USHBP1-203ENST00000431146 PLEKHA7Q6IQ23 1121 aa17.71■□□□□ 0.42
USHBP1-203ENST00000431146 TMEM35BQ8NCS4 154 aa17.71■□□□□ 0.42
USHBP1-203ENST00000431146 AENQ8WTP8 325 aaKnown RBP17.71■□□□□ 0.42
USHBP1-203ENST00000431146 CASKIN2Q8WXE0 1202 aa17.71■□□□□ 0.42
USHBP1-203ENST00000431146 WNT8BQ93098 351 aa17.71■□□□□ 0.42
USHBP1-203ENST00000431146 VCPIP1Q96JH7 1222 aa17.71■□□□□ 0.42
USHBP1-203ENST00000431146 MTG1Q9BT17 334 aaPredicted RBP17.71■□□□□ 0.42
USHBP1-203ENST00000431146 TJP2Q9UDY2 1190 aa17.71■□□□□ 0.42
USHBP1-203ENST00000431146 CYTH4Q9UIA0 394 aa17.71■□□□□ 0.42
USHBP1-203ENST00000431146 CCDC66A2RUB6 948 aa17.7■□□□□ 0.42
USHBP1-203ENST00000431146 CCDC188H7C350 402 aa17.7■□□□□ 0.42
USHBP1-203ENST00000431146 CTNNA2P26232 953 aa17.7■□□□□ 0.42
USHBP1-203ENST00000431146 CRYBB1P53674 252 aaPredicted RBP17.7■□□□□ 0.42
USHBP1-203ENST00000431146 GDF6Q6KF10 455 aaPredicted RBP17.7■□□□□ 0.42
USHBP1-203ENST00000431146 APBB1IPQ7Z5R6 666 aaPredicted RBP17.7■□□□□ 0.42
USHBP1-203ENST00000431146 ZDHHC14Q8IZN3 488 aa17.7■□□□□ 0.42
USHBP1-203ENST00000431146 HHIPL1Q96JK4 782 aa17.7■□□□□ 0.42
USHBP1-203ENST00000431146 VRTNQ9H8Y1 702 aa17.7■□□□□ 0.42
USHBP1-203ENST00000431146 GDF3Q9NR23 364 aa17.7■□□□□ 0.42
USHBP1-203ENST00000431146 RNF186Q9NXI6 227 aa17.7■□□□□ 0.42
USHBP1-203ENST00000431146 NFU1Q9UMS0 254 aa17.7■□□□□ 0.42
USHBP1-203ENST00000431146 PCDHGC3Q9UN70 934 aa17.7■□□□□ 0.42
USHBP1-203ENST00000431146 PDCD11Q14690 1871 aaKnown RBP17.7■□□□□ 0.42
USHBP1-203ENST00000431146 TLR3O15455 904 aaKnown RBP17.69■□□□□ 0.42
USHBP1-203ENST00000431146 LSM8O95777 96 aaKnown RBP17.69■□□□□ 0.42
USHBP1-203ENST00000431146 CTSHP09668 335 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 RARBP10826 455 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 PTPN11Q06124 597 aaPredicted RBP17.69■□□□□ 0.42
USHBP1-203ENST00000431146 SLC20A2Q08357 652 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 UBXN11Q5T124 520 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 SEL1L2Q5TEA6 688 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 CD302Q8IX05 232 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 IFT20Q8IY31 132 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 TMEM176AQ96HP8 235 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 PLEKHA5Q9HAU0 1116 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 MRPL47Q9HD33 250 aaKnown RBP17.69■□□□□ 0.42
USHBP1-203ENST00000431146 PARVAQ9NVD7 372 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 PARP2Q9UGN5 583 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 USTQ9Y2C2 406 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 TTI1O43156 1089 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 SEPT4O43236 478 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 PROSCO94903 275 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 ALDH1A1P00352 501 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 P4HA1P13674 534 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 NDST1P52848 882 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 RWDD2BP57060 319 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 SMC1AQ14683 1233 aaKnown RBP17.69■□□□□ 0.42
USHBP1-203ENST00000431146 SND1Q7KZF4 910 aaKnown RBP eCLIP17.69■□□□□ 0.42
USHBP1-203ENST00000431146 ERICH1Q86X53 443 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 DDX42Q86XP3 938 aaKnown RBP eCLIP17.69■□□□□ 0.42
USHBP1-203ENST00000431146 NT5DC4Q86YG4 428 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 RUBCNQ92622 972 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 HEXIM2Q96MH2 286 aaKnown RBP17.69■□□□□ 0.42
USHBP1-203ENST00000431146 MCEEQ96PE7 176 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 GTF2IRD1Q9UHL9 959 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 CEP83Q9Y592 693 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 SNX9Q9Y5X1 595 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 SCINQ9Y6U3 715 aa17.69■□□□□ 0.42
USHBP1-203ENST00000431146 GJC1P36383 396 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 ZBTB6Q15916 424 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 PTPN20Q4JDL3 420 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 ALKAL1Q6UXT8 129 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 SESTD1Q86VW0 696 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 FAM228AQ86W67 206 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 FEZF2Q8TBJ5 459 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 NAP1L3Q99457 506 aaPredicted RBP17.68■□□□□ 0.42
USHBP1-203ENST00000431146 XPNPEP3Q9NQH7 507 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 CDY2AQ9Y6F7 541 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 CALB1P05937 261 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 PAEPP09466 180 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 FAM153BP0C7A2 387 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 PRKAR2AP13861 404 aaKnown RBP17.68■□□□□ 0.42
USHBP1-203ENST00000431146 AXLP30530 894 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 CDH5P33151 784 aaPredicted RBP17.68■□□□□ 0.42
USHBP1-203ENST00000431146 SSR1P43307 286 aaKnown RBP17.68■□□□□ 0.42
USHBP1-203ENST00000431146 TAS2R40P59535 323 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 MYO1EQ12965 1108 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 NOGQ13253 232 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 PCBP1Q15365 356 aaKnown RBP eCLIP17.68■□□□□ 0.42
USHBP1-203ENST00000431146 FAM153CQ494X1 144 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 TWF2Q6IBS0 349 aaKnown RBP17.68■□□□□ 0.42
USHBP1-203ENST00000431146 DNAJC24Q6P3W2 148 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 NME8Q8N427 588 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 ARRDC4Q8NCT1 418 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 CAPNS2Q96L46 248 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 CYP3A43Q9HB55 503 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 SPC25Q9HBM1 224 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 GOLGA2P5Q9HBQ8 144 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 CNTN3Q9P232 1028 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 FAM153AQ9UHL3 310 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 IPPQ9Y573 584 aa17.68■□□□□ 0.42
USHBP1-203ENST00000431146 GOLGA8SH3BPF8 625 aa17.67■□□□□ 0.42
USHBP1-203ENST00000431146 H3BQF6 201 aa17.67■□□□□ 0.42
USHBP1-203ENST00000431146 MED7O43513 233 aa17.67■□□□□ 0.42
USHBP1-203ENST00000431146 ADAMTS4O75173 837 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms