RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 MRPL28Q13084 256 aaKnown RBP3.2□□□□□ -1.9
PMS1-209ENST00000424059 IQCB1Q15051 598 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 MBNL2Q5VZF2 373 aaKnown RBP3.2□□□□□ -1.9
PMS1-209ENST00000424059 PPP4R3AQ6IN85 833 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 OLFML1Q6UWY5 402 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 ESPNLQ6ZVH7 1005 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 CDYL2Q8N8U2 506 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 OR52N2Q8NGI0 321 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 SUN5Q8TC36 379 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 BICD2Q8TD16 824 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 BRSK1Q8TDC3 778 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 HVCN1Q96D96 273 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 RBM17Q96I25 401 aaKnown RBP3.2□□□□□ -1.9
PMS1-209ENST00000424059 CLUHP3Q96NS8 147 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 ELF4Q99607 663 aaPredicted RBP3.2□□□□□ -1.9
PMS1-209ENST00000424059 NDC1Q9BTX1 674 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 MYL10Q9BUA6 226 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 SELENOOQ9BVL4 669 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 LRRCC1Q9C099 1032 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 KCNH6Q9H252 994 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 TMEM165Q9HC07 324 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 FANCFQ9NPI8 374 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 TOMM22Q9NS69 142 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 PIH1D1Q9NWS0 290 aaKnown RBP3.2□□□□□ -1.9
PMS1-209ENST00000424059 UBAP1Q9NZ09 502 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 C9orf78Q9NZ63 289 aaPredicted RBP3.2□□□□□ -1.9
PMS1-209ENST00000424059 STAP2Q9UGK3 403 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 C2CD2Q9Y426 696 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 A0A0A6YYK5 440 aaPredicted RBP3.2□□□□□ -1.9
PMS1-209ENST00000424059 SNX2O60749 519 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 SKAP2O75563 359 aaPredicted RBP3.2□□□□□ -1.9
PMS1-209ENST00000424059 ALDH1A2O94788 518 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 SEC24DO94855 1032 aaPredicted RBP3.2□□□□□ -1.9
PMS1-209ENST00000424059 MAP2K2P36507 400 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 STT3AP46977 705 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 MASP1P48740 699 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 CDKN1CP49918 316 aaPredicted RBP3.2□□□□□ -1.9
PMS1-209ENST00000424059 HDAC4P56524 1084 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 NRG3P56975 720 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 MRPL49Q13405 166 aaKnown RBP3.2□□□□□ -1.9
PMS1-209ENST00000424059 KIAA0753Q2KHM9 967 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 KBTBD12Q3ZCT8 623 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 SMUG1Q53HV7 270 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 HECTD2Q5U5R9 776 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 TAS1R1Q7RTX1 841 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 CATSPER4Q7RTX7 472 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 C14orf80Q86SX3 495 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 ERC1Q8IUD2 1116 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 LURAP1LQ8IV03 231 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 KRT222Q8N1A0 295 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 ERMNQ8TAM6 284 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 FAM76AQ8TAV0 307 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 CPT1CQ8TCG5 803 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 JAKMIP2Q96AA8 810 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 ZNF764Q96H86 408 aaPredicted RBP3.2□□□□□ -1.9
PMS1-209ENST00000424059 NEK1Q96PY6 1258 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 SOX7Q9BT81 388 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 ZMAT4Q9H898 229 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 OXSMQ9NWU1 459 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 SEPT10Q9P0V9 454 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 FBXL5Q9UKA1 691 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 GTF2A1LQ9UNN4 478 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 SORCS3Q9UPU3 1222 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 PCDHB6Q9Y5E3 794 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 PCDHGB3Q9Y5G1 929 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 PRDM2Q13029 1718 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 SCRIBQ14160 1630 aa3.2□□□□□ -1.9
PMS1-209ENST00000424059 DHX29Q7Z478 1369 aaKnown RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 MYPNQ86TC9 1320 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 EVC2Q86UK5 1308 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 UQCRHLA0A096LP55 91 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 TMEM200CA6NKL6 621 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 KIF2AO00139 706 aaPredicted RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 RNASET2O00584 256 aaKnown RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 PIP5K1CO60331 668 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 NEMFO60524 1076 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 KPNA6O60684 536 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 SNUPNO95149 360 aaKnown RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 NUDT3O95989 172 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 UQCRHP07919 91 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 POU3F2P20265 443 aaPredicted RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 NR4A1P22736 598 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 XPAP23025 273 aaPredicted RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 PTX3P26022 381 aaPredicted RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 MATR3P43243 847 aaKnown RBP eCLIP3.19□□□□□ -1.9
PMS1-209ENST00000424059 AVPR1BP47901 424 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 NUCB2P80303 420 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 OCRLQ01968 901 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 MEF2AQ02078 507 aaPredicted RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 FSTL1Q12841 308 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 DDX10Q13206 875 aaKnown RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 PPP2R5CQ13362 524 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 MORC3Q14149 939 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 SMC1AQ14683 1233 aaKnown RBP3.19□□□□□ -1.9
PMS1-209ENST00000424059 CCDC142Q17RM4 750 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 CFAP100Q494V2 611 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 TTLL5Q6EMB2 1281 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 SYCE2Q6PIF2 218 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 LVRNQ6Q4G3 990 aa3.19□□□□□ -1.9
PMS1-209ENST00000424059 LEKR1Q6ZMV7 388 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms