RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 FSHRP23945 695 aa11.77□□□□□ -0.53
USP49-204ENST00000423567 AP3M2P53677 418 aa11.77□□□□□ -0.53
USP49-204ENST00000423567 TSPY1Q01534 308 aa11.77□□□□□ -0.53
USP49-204ENST00000423567 TRPC3Q13507 836 aa11.77□□□□□ -0.53
USP49-204ENST00000423567 PABPC1LQ4VXU2 614 aaKnown RBP11.77□□□□□ -0.53
USP49-204ENST00000423567 TMEM31Q5JXX7 168 aa11.77□□□□□ -0.53
USP49-204ENST00000423567 WSCD1Q658N2 575 aa11.77□□□□□ -0.53
USP49-204ENST00000423567 CEP135Q66GS9 1140 aa11.77□□□□□ -0.53
USP49-204ENST00000423567 IQCEQ6IPM2 695 aa11.77□□□□□ -0.53
USP49-204ENST00000423567 RNF19BQ6ZMZ0 732 aa11.77□□□□□ -0.53
USP49-204ENST00000423567 GET4Q7L5D6 327 aaPredicted RBP11.77□□□□□ -0.53
USP49-204ENST00000423567 TRAPPC11Q7Z392 1133 aa11.77□□□□□ -0.53
USP49-204ENST00000423567 DCP1BQ8IZD4 617 aaKnown RBP11.77□□□□□ -0.53
USP49-204ENST00000423567 TMEM86AQ8N2M4 240 aa11.77□□□□□ -0.53
USP49-204ENST00000423567 OR5B17Q8NGF7 314 aa11.77□□□□□ -0.53
USP49-204ENST00000423567 TMEM174Q8WUU8 243 aa11.77□□□□□ -0.53
USP49-204ENST00000423567 KHSRPQ92945 711 aaKnown RBP eCLIP11.77□□□□□ -0.53
USP49-204ENST00000423567 HPDLQ96IR7 371 aa11.77□□□□□ -0.53
USP49-204ENST00000423567 MFSD14AQ96MC6 490 aa11.77□□□□□ -0.53
USP49-204ENST00000423567 LIMD1Q9UGP4 676 aa11.77□□□□□ -0.53
USP49-204ENST00000423567 MAPK8IP1Q9UQF2 711 aa11.77□□□□□ -0.53
USP49-204ENST00000423567 TRAF3IP3Q9Y228 551 aa11.77□□□□□ -0.53
USP49-204ENST00000423567 INSL5Q9Y5Q6 135 aa11.77□□□□□ -0.53
USP49-204ENST00000423567 SNX9Q9Y5X1 595 aa11.77□□□□□ -0.53
USP49-204ENST00000423567 PTPN2P17706 415 aa11.76□□□□□ -0.53
USP49-204ENST00000423567 NR2F2P24468 414 aa11.76□□□□□ -0.53
USP49-204ENST00000423567 ALDH1A3P47895 512 aa11.76□□□□□ -0.53
USP49-204ENST00000423567 MYL7Q01449 175 aa11.76□□□□□ -0.53
USP49-204ENST00000423567 SMARCB1Q12824 385 aa11.76□□□□□ -0.53
USP49-204ENST00000423567 BIRC3Q13489 604 aa11.76□□□□□ -0.53
USP49-204ENST00000423567 STIM1Q13586 685 aa11.76□□□□□ -0.53
USP49-204ENST00000423567 MTMR3Q13615 1198 aa11.76□□□□□ -0.53
USP49-204ENST00000423567 PTPN21Q16825 1174 aa11.76□□□□□ -0.53
USP49-204ENST00000423567 ZNF658Q5TYW1 1059 aaPredicted RBP11.76□□□□□ -0.53
USP49-204ENST00000423567 ELOA2Q8IYF1 753 aaPredicted RBP11.76□□□□□ -0.53
USP49-204ENST00000423567 TOP6BLQ8N6T0 577 aa11.76□□□□□ -0.53
USP49-204ENST00000423567 FEZF2Q8TBJ5 459 aa11.76□□□□□ -0.53
USP49-204ENST00000423567 SPATA18Q8TC71 538 aa11.76□□□□□ -0.53
USP49-204ENST00000423567 C2orf15Q8WU43 125 aaKnown RBP11.76□□□□□ -0.53
USP49-204ENST00000423567 BORCS6Q96GS4 357 aa11.76□□□□□ -0.53
USP49-204ENST00000423567 FAM84AQ96KN4 292 aa11.76□□□□□ -0.53
USP49-204ENST00000423567 ZNF512Q96ME7 567 aaPredicted RBP11.76□□□□□ -0.53
USP49-204ENST00000423567 PGLYRP2Q96PD5 576 aa11.76□□□□□ -0.53
USP49-204ENST00000423567 TSG101Q99816 390 aa11.76□□□□□ -0.53
USP49-204ENST00000423567 DMAC2Q9NW81 257 aa11.76□□□□□ -0.53
USP49-204ENST00000423567 GDAP2Q9NXN4 497 aa11.76□□□□□ -0.53
USP49-204ENST00000423567 SIX4Q9UIU6 781 aa11.76□□□□□ -0.53
USP49-204ENST00000423567 SORCS3Q9UPU3 1222 aa11.76□□□□□ -0.53
USP49-204ENST00000423567 PCDHA5Q9Y5H7 936 aa11.76□□□□□ -0.53
USP49-204ENST00000423567 ZFP37Q9Y6Q3 630 aaPredicted RBP11.76□□□□□ -0.53
USP49-204ENST00000423567 PLXNA3P51805 1871 aa11.76□□□□□ -0.53
USP49-204ENST00000423567 VWA8A3KMH1 1905 aa11.76□□□□□ -0.53
USP49-204ENST00000423567 MAPK13O15264 365 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 SEC24AO95486 1093 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 KRT13P13646 458 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 PCSK1P29120 753 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 LHX1P48742 406 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 EPHB3P54753 998 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 UBE2HP62256 183 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 ZXDAP98168 799 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 TWF1Q12792 350 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 NFIL3Q16649 462 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 SLC39A12Q504Y0 691 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 CYP4A22Q5TCH4 519 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 DPH6Q7L8W6 267 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 UBALD2Q8IYN6 164 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 ADGRF2Q8IZF7 708 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 PDCL2Q8N4E4 241 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 LEMD2Q8NC56 503 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 OR10T2Q8NGX3 314 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 EDAQ92838 391 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 MMS19Q96T76 1030 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 ZCWPW1Q9H0M4 648 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 PLSCR2Q9NRY7 297 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 DDX43Q9NXZ2 648 aaKnown RBP11.75□□□□□ -0.53
USP49-204ENST00000423567 IGSF9Q9P2J2 1179 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 EPS15L1Q9UBC2 864 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 HSFX1Q9UBD0 423 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 L1RE1Q9UN81 338 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 MRPS23Q9Y3D9 190 aaKnown RBP11.75□□□□□ -0.53
USP49-204ENST00000423567 YIPF1Q9Y548 306 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 TCHHQ07283 1943 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 PTPRJQ12913 1337 aa11.75□□□□□ -0.53
USP49-204ENST00000423567 MTMR11A4FU01 709 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 ZNF197O14709 1029 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 CETN3O15182 167 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 GPR37L1O60883 481 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 GADD45BO75293 160 aaPredicted RBP11.74□□□□□ -0.53
USP49-204ENST00000423567 ASGR2P07307 311 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 RHOP08100 348 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 LAMP2P13473 410 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 ATICP31939 592 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 PSMC2P35998 433 aaKnown RBP11.74□□□□□ -0.53
USP49-204ENST00000423567 PPP1R2P41236 205 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 TUFMP49411 452 aaKnown RBP11.74□□□□□ -0.53
USP49-204ENST00000423567 TNNC1P63316 161 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 NTHL1P78549 312 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 DUSP4Q13115 394 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 ADAM9Q13443 819 aa11.74□□□□□ -0.53
USP49-204ENST00000423567 NFE2Q16621 373 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms