RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 KLHL40Q2TBA0 621 aa24.78■■□□□ 1.56
SMARCB1-205ENST00000417137 UVSSAQ2YD98 709 aa24.78■■□□□ 1.56
SMARCB1-205ENST00000417137 ZNF699Q32M78 642 aa24.78■■□□□ 1.56
SMARCB1-205ENST00000417137 LIN9Q5TKA1 542 aa24.78■■□□□ 1.56
SMARCB1-205ENST00000417137 CAVIN1Q6NZI2 390 aaKnown RBP24.78■■□□□ 1.56
SMARCB1-205ENST00000417137 SYCE2Q6PIF2 218 aa24.78■■□□□ 1.56
SMARCB1-205ENST00000417137 CCDC149Q6ZUS6 474 aa24.78■■□□□ 1.56
SMARCB1-205ENST00000417137 SMRP1Q8NCR6 262 aa24.78■■□□□ 1.56
SMARCB1-205ENST00000417137 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.78■■□□□ 1.56
SMARCB1-205ENST00000417137 XYLT2Q9H1B5 865 aa24.78■■□□□ 1.56
SMARCB1-205ENST00000417137 ANO10Q9NW15 660 aa24.78■■□□□ 1.56
SMARCB1-205ENST00000417137 TMEM63CQ9P1W3 806 aa24.78■■□□□ 1.56
SMARCB1-205ENST00000417137 FBXW11Q9UKB1 542 aa24.78■■□□□ 1.56
SMARCB1-205ENST00000417137 L1RE1Q9UN81 338 aa24.78■■□□□ 1.56
SMARCB1-205ENST00000417137 ABLIM3O94929 683 aa24.77■■□□□ 1.56
SMARCB1-205ENST00000417137 VNN1O95497 513 aa24.77■■□□□ 1.56
SMARCB1-205ENST00000417137 HLA-DRAP01903 254 aa24.77■■□□□ 1.56
SMARCB1-205ENST00000417137 MYL7Q01449 175 aa24.77■■□□□ 1.56
SMARCB1-205ENST00000417137 SOWAHAQ2M3V2 549 aa24.77■■□□□ 1.56
SMARCB1-205ENST00000417137 SKOR2Q2VWA4 1001 aaPredicted RBP24.77■■□□□ 1.56
SMARCB1-205ENST00000417137 ZNF667Q5HYK9 610 aa24.77■■□□□ 1.56
SMARCB1-205ENST00000417137 PTCRAQ6ISU1 281 aaPredicted RBP24.77■■□□□ 1.56
SMARCB1-205ENST00000417137 ADGRF2Q8IZF7 708 aa24.77■■□□□ 1.56
SMARCB1-205ENST00000417137 S1PR5Q9H228 398 aa24.77■■□□□ 1.56
SMARCB1-205ENST00000417137 ADAM7Q9H2U9 754 aa24.77■■□□□ 1.56
SMARCB1-205ENST00000417137 NXF1Q9UBU9 619 aaKnown RBP24.77■■□□□ 1.56
SMARCB1-205ENST00000417137 WDR27A2RRH5 827 aa24.76■■□□□ 1.55
SMARCB1-205ENST00000417137 LETM1O95202 739 aaPredicted RBP24.76■■□□□ 1.55
SMARCB1-205ENST00000417137 ATF2P15336 505 aa24.76■■□□□ 1.55
SMARCB1-205ENST00000417137 MXI1P50539 228 aa24.76■■□□□ 1.55
SMARCB1-205ENST00000417137 CYP26C1Q6V0L0 522 aa24.76■■□□□ 1.55
SMARCB1-205ENST00000417137 LIMS2Q7Z4I7 341 aa24.76■■□□□ 1.55
SMARCB1-205ENST00000417137 DCP1BQ8IZD4 617 aaKnown RBP24.76■■□□□ 1.55
SMARCB1-205ENST00000417137 CMASQ8NFW8 434 aaPredicted RBP24.76■■□□□ 1.55
SMARCB1-205ENST00000417137 ZDHHC7Q9NXF8 308 aa24.76■■□□□ 1.55
SMARCB1-205ENST00000417137 AFF4Q9UHB7 1163 aaKnown RBP24.76■■□□□ 1.55
SMARCB1-205ENST00000417137 VWA8A3KMH1 1905 aa24.76■■□□□ 1.55
SMARCB1-205ENST00000417137 SCN1AP35498 2009 aa24.75■■□□□ 1.55
SMARCB1-205ENST00000417137 GRXCR2A6NFK2 248 aa24.75■■□□□ 1.55
SMARCB1-205ENST00000417137 TNFRSF10AO00220 468 aa24.75■■□□□ 1.55
SMARCB1-205ENST00000417137 MBTPS2O43462 519 aa24.75■■□□□ 1.55
SMARCB1-205ENST00000417137 PCSK1P29120 753 aa24.75■■□□□ 1.55
SMARCB1-205ENST00000417137 MARSP56192 900 aaKnown RBP24.75■■□□□ 1.55
SMARCB1-205ENST00000417137 TSPY1Q01534 308 aa24.75■■□□□ 1.55
SMARCB1-205ENST00000417137 SMARCB1Q12824 385 aa24.75■■□□□ 1.55
SMARCB1-205ENST00000417137 GPR17Q13304 367 aa24.75■■□□□ 1.55
SMARCB1-205ENST00000417137 STX1AQ16623 288 aa24.75■■□□□ 1.55
SMARCB1-205ENST00000417137 ATAT1Q5SQI0 421 aa24.75■■□□□ 1.55
SMARCB1-205ENST00000417137 RARS2Q5T160 578 aaKnown RBP24.75■■□□□ 1.55
SMARCB1-205ENST00000417137 C12orf76Q8N812 135 aaPredicted RBP24.75■■□□□ 1.55
SMARCB1-205ENST00000417137 FBXL13Q8NEE6 735 aa24.75■■□□□ 1.55
SMARCB1-205ENST00000417137 SLC35C1Q96A29 364 aa24.75■■□□□ 1.55
SMARCB1-205ENST00000417137 RIPOR3Q96MK2 946 aa24.75■■□□□ 1.55
SMARCB1-205ENST00000417137 ACBD6Q9BR61 282 aa24.75■■□□□ 1.55
SMARCB1-205ENST00000417137 DDX43Q9NXZ2 648 aaKnown RBP24.75■■□□□ 1.55
SMARCB1-205ENST00000417137 CCDC195A0A1B0GUA6 201 aa24.74■■□□□ 1.55
SMARCB1-205ENST00000417137 PRRG1O14668 218 aa24.74■■□□□ 1.55
SMARCB1-205ENST00000417137 GABRDO14764 452 aa24.74■■□□□ 1.55
SMARCB1-205ENST00000417137 N4BP1O75113 896 aaKnown RBP24.74■■□□□ 1.55
SMARCB1-205ENST00000417137 TACC1O75410 805 aa24.74■■□□□ 1.55
SMARCB1-205ENST00000417137 ZMYND10O75800 440 aa24.74■■□□□ 1.55
SMARCB1-205ENST00000417137 HNRNPA1P09651 372 aaKnown RBP eCLIP24.74■■□□□ 1.55
SMARCB1-205ENST00000417137 KCNQ1P51787 676 aa24.74■■□□□ 1.55
SMARCB1-205ENST00000417137 CETN1Q12798 172 aa24.74■■□□□ 1.55
SMARCB1-205ENST00000417137 PPM1LQ5SGD2 360 aa24.74■■□□□ 1.55
SMARCB1-205ENST00000417137 CREBRFQ8IUR6 639 aa24.74■■□□□ 1.55
SMARCB1-205ENST00000417137 FAM114A1Q8IWE2 563 aa24.74■■□□□ 1.55
SMARCB1-205ENST00000417137 TAS1R2Q8TE23 839 aa24.74■■□□□ 1.55
SMARCB1-205ENST00000417137 MED15Q96RN5 788 aa24.74■■□□□ 1.55
SMARCB1-205ENST00000417137 APOL5Q9BWW9 433 aa24.74■■□□□ 1.55
SMARCB1-205ENST00000417137 ZCWPW1Q9H0M4 648 aa24.74■■□□□ 1.55
SMARCB1-205ENST00000417137 SNX25Q9H3E2 840 aa24.74■■□□□ 1.55
SMARCB1-205ENST00000417137 THAP9Q9H5L6 903 aa24.74■■□□□ 1.55
SMARCB1-205ENST00000417137 ASS1P00966 412 aaKnown RBP24.73■■□□□ 1.55
SMARCB1-205ENST00000417137 C8AP07357 584 aa24.73■■□□□ 1.55
SMARCB1-205ENST00000417137 WARSP23381 471 aaKnown RBP24.73■■□□□ 1.55
SMARCB1-205ENST00000417137 HOXA9P31269 272 aa24.73■■□□□ 1.55
SMARCB1-205ENST00000417137 MTHFRP42898 656 aa24.73■■□□□ 1.55
SMARCB1-205ENST00000417137 ADCY1Q08828 1119 aa24.73■■□□□ 1.55
SMARCB1-205ENST00000417137 WDR44Q5JSH3 913 aa24.73■■□□□ 1.55
SMARCB1-205ENST00000417137 TMC5Q6UXY8 1006 aa24.73■■□□□ 1.55
SMARCB1-205ENST00000417137 RNF19BQ6ZMZ0 732 aa24.73■■□□□ 1.55
SMARCB1-205ENST00000417137 TCEAL8Q8IYN2 117 aa24.73■■□□□ 1.55
SMARCB1-205ENST00000417137 OR10T2Q8NGX3 314 aa24.73■■□□□ 1.55
SMARCB1-205ENST00000417137 NECTIN4Q96NY8 510 aa24.73■■□□□ 1.55
SMARCB1-205ENST00000417137 RTP3Q9BQQ7 232 aa24.73■■□□□ 1.55
SMARCB1-205ENST00000417137 CYP4F11Q9HBI6 524 aa24.73■■□□□ 1.55
SMARCB1-205ENST00000417137 RAB20Q9NX57 234 aa24.73■■□□□ 1.55
SMARCB1-205ENST00000417137 USP15Q9Y4E8 981 aaPredicted RBP24.73■■□□□ 1.55
SMARCB1-205ENST00000417137 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.73■■□□□ 1.55
SMARCB1-205ENST00000417137 OR4Q2P0C623 313 aa24.72■■□□□ 1.55
SMARCB1-205ENST00000417137 BMP1P13497 986 aa24.72■■□□□ 1.55
SMARCB1-205ENST00000417137 GNL1P36915 607 aaPredicted RBP24.72■■□□□ 1.55
SMARCB1-205ENST00000417137 SMAD2Q15796 467 aaKnown RBP24.72■■□□□ 1.55
SMARCB1-205ENST00000417137 GPR149Q86SP6 731 aa24.72■■□□□ 1.55
SMARCB1-205ENST00000417137 TRIM59Q8IWR1 403 aa24.72■■□□□ 1.55
SMARCB1-205ENST00000417137 SLC7A14Q8TBB6 771 aa24.72■■□□□ 1.55
SMARCB1-205ENST00000417137 C2orf15Q8WU43 125 aaKnown RBP24.72■■□□□ 1.55
SMARCB1-205ENST00000417137 RHOBTB2Q9BYZ6 727 aa24.72■■□□□ 1.55
SMARCB1-205ENST00000417137 PRKD2Q9BZL6 878 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms