RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 SPATA1Q5VX52 437 aa16.72■□□□□ 0.27
DDX56-202ENST00000415758 HEATR6Q6AI08 1181 aaKnown RBP16.72■□□□□ 0.27
DDX56-202ENST00000415758 GPIHBP1Q8IV16 184 aa16.72■□□□□ 0.27
DDX56-202ENST00000415758 FAM184AQ8NB25 1140 aa16.72■□□□□ 0.27
DDX56-202ENST00000415758 FAM200AQ8TCP9 573 aa16.72■□□□□ 0.27
DDX56-202ENST00000415758 BPIFB1Q8TDL5 484 aa16.72■□□□□ 0.27
DDX56-202ENST00000415758 LOXL4Q96JB6 756 aa16.72■□□□□ 0.27
DDX56-202ENST00000415758 ZFYVE19Q96K21 471 aa16.72■□□□□ 0.27
DDX56-202ENST00000415758 TASP1Q9H6P5 420 aa16.72■□□□□ 0.27
DDX56-202ENST00000415758 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.72■□□□□ 0.27
DDX56-202ENST00000415758 LARSQ9P2J5 1176 aaKnown RBP16.72■□□□□ 0.27
DDX56-202ENST00000415758 KIF26AQ9ULI4 1882 aaPredicted RBP16.71■□□□□ 0.27
DDX56-202ENST00000415758 SCP2P22307 547 aa16.71■□□□□ 0.27
DDX56-202ENST00000415758 TUFMP49411 452 aaKnown RBP16.71■□□□□ 0.27
DDX56-202ENST00000415758 SLC12A3P55017 1021 aa16.71■□□□□ 0.27
DDX56-202ENST00000415758 CACNB1Q02641 598 aaPredicted RBP16.71■□□□□ 0.27
DDX56-202ENST00000415758 RAD51AP2Q09MP3 1159 aa16.71■□□□□ 0.27
DDX56-202ENST00000415758 ENOX2Q16206 610 aaKnown RBP16.71■□□□□ 0.27
DDX56-202ENST00000415758 ARMCX5Q6P1M9 558 aa16.71■□□□□ 0.27
DDX56-202ENST00000415758 CEP68Q76N32 757 aa16.71■□□□□ 0.27
DDX56-202ENST00000415758 CD302Q8IX05 232 aa16.71■□□□□ 0.27
DDX56-202ENST00000415758 TTC9BQ8N6N2 239 aa16.71■□□□□ 0.27
DDX56-202ENST00000415758 SENP8Q96LD8 212 aa16.71■□□□□ 0.27
DDX56-202ENST00000415758 ZSCAN31Q96LW9 406 aaPredicted RBP16.71■□□□□ 0.27
DDX56-202ENST00000415758 PNMA5Q96PV4 448 aa16.71■□□□□ 0.27
DDX56-202ENST00000415758 IL21Q9HBE4 155 aa16.71■□□□□ 0.27
DDX56-202ENST00000415758 ZMYM5Q9UJ78 669 aa16.71■□□□□ 0.27
DDX56-202ENST00000415758 SDK1Q7Z5N4 2213 aa16.71■□□□□ 0.27
DDX56-202ENST00000415758 USP24Q9UPU5 2620 aa16.71■□□□□ 0.27
DDX56-202ENST00000415758 PIRO00625 290 aa16.7■□□□□ 0.26
DDX56-202ENST00000415758 OGTO15294 1046 aa16.7■□□□□ 0.26
DDX56-202ENST00000415758 PRAMEF12O95522 483 aa16.7■□□□□ 0.26
DDX56-202ENST00000415758 PIGRP01833 764 aa16.7■□□□□ 0.26
DDX56-202ENST00000415758 CYP11A1P05108 521 aa16.7■□□□□ 0.26
DDX56-202ENST00000415758 ZNF806P0C7X5 589 aa16.7■□□□□ 0.26
DDX56-202ENST00000415758 ODC1P11926 461 aa16.7■□□□□ 0.26
DDX56-202ENST00000415758 HOXC13P31276 330 aa16.7■□□□□ 0.26
DDX56-202ENST00000415758 MATR3P43243 847 aaKnown RBP eCLIP16.7■□□□□ 0.26
DDX56-202ENST00000415758 RAP1GAPP47736 663 aa16.7■□□□□ 0.26
DDX56-202ENST00000415758 TNK2Q07912 1038 aa16.7■□□□□ 0.26
DDX56-202ENST00000415758 PTPAQ15257 358 aa16.7■□□□□ 0.26
DDX56-202ENST00000415758 ITPRIPL2Q3MIP1 535 aa16.7■□□□□ 0.26
DDX56-202ENST00000415758 ARSHQ5FYA8 562 aa16.7■□□□□ 0.26
DDX56-202ENST00000415758 TTC8Q8TAM2 541 aa16.7■□□□□ 0.26
DDX56-202ENST00000415758 GAB3Q8WWW8 586 aa16.7■□□□□ 0.26
DDX56-202ENST00000415758 TMEM209Q96SK2 561 aa16.7■□□□□ 0.26
DDX56-202ENST00000415758 RPF1Q9H9Y2 349 aaKnown RBP16.7■□□□□ 0.26
DDX56-202ENST00000415758 THG1LQ9NWX6 298 aaKnown RBP16.7■□□□□ 0.26
DDX56-202ENST00000415758 ANK1P16157 1881 aa16.69■□□□□ 0.26
DDX56-202ENST00000415758 DENND4CQ5VZ89 1909 aa16.69■□□□□ 0.26
DDX56-202ENST00000415758 ANO9A1A5B4 782 aa16.69■□□□□ 0.26
DDX56-202ENST00000415758 PPEF2O14830 753 aa16.69■□□□□ 0.26
DDX56-202ENST00000415758 EXTL3O43909 919 aa16.69■□□□□ 0.26
DDX56-202ENST00000415758 SOAT2O75908 522 aa16.69■□□□□ 0.26
DDX56-202ENST00000415758 CDC25CP30307 473 aa16.69■□□□□ 0.26
DDX56-202ENST00000415758 MCM2P49736 904 aa16.69■□□□□ 0.26
DDX56-202ENST00000415758 GUCY2FP51841 1108 aa16.69■□□□□ 0.26
DDX56-202ENST00000415758 ATP2C1P98194 919 aaPredicted RBP16.69■□□□□ 0.26
DDX56-202ENST00000415758 SMARCB1Q12824 385 aa16.69■□□□□ 0.26
DDX56-202ENST00000415758 TMEM196Q5HYL7 178 aa16.69■□□□□ 0.26
DDX56-202ENST00000415758 C9orf57Q5W0N0 161 aa16.69■□□□□ 0.26
DDX56-202ENST00000415758 CACNA2D4Q7Z3S7 1137 aa16.69■□□□□ 0.26
DDX56-202ENST00000415758 OR10T2Q8NGX3 314 aa16.69■□□□□ 0.26
DDX56-202ENST00000415758 BICD1Q96G01 975 aa16.69■□□□□ 0.26
DDX56-202ENST00000415758 FAM83CQ9BQN1 747 aa16.69■□□□□ 0.26
DDX56-202ENST00000415758 SLC46A2Q9BY10 475 aa16.69■□□□□ 0.26
DDX56-202ENST00000415758 ZCWPW1Q9H0M4 648 aa16.69■□□□□ 0.26
DDX56-202ENST00000415758 SH2B1Q9NRF2 756 aaPredicted RBP16.69■□□□□ 0.26
DDX56-202ENST00000415758 ODF2LQ9ULJ1 636 aa16.69■□□□□ 0.26
DDX56-202ENST00000415758 TBX20Q9UMR3 447 aa16.69■□□□□ 0.26
DDX56-202ENST00000415758 TSC2P49815 1807 aa16.68■□□□□ 0.26
DDX56-202ENST00000415758 CFAP47Q6ZTR5 3102 aa16.68■□□□□ 0.26
DDX56-202ENST00000415758 A0A0B4J269 797 aa16.68■□□□□ 0.26
DDX56-202ENST00000415758 AXIN1O15169 862 aa16.68■□□□□ 0.26
DDX56-202ENST00000415758 ATG13O75143 517 aa16.68■□□□□ 0.26
DDX56-202ENST00000415758 PLA2G4BP0C869 781 aa16.68■□□□□ 0.26
DDX56-202ENST00000415758 ATF6P18850 670 aa16.68■□□□□ 0.26
DDX56-202ENST00000415758 LIG4P49917 911 aa16.68■□□□□ 0.26
DDX56-202ENST00000415758 IL31Q6EBC2 164 aa16.68■□□□□ 0.26
DDX56-202ENST00000415758 C2orf15Q8WU43 125 aaKnown RBP16.68■□□□□ 0.26
DDX56-202ENST00000415758 CHAMP1Q96JM3 812 aa16.68■□□□□ 0.26
DDX56-202ENST00000415758 ZC3H10Q96K80 434 aaKnown RBP16.68■□□□□ 0.26
DDX56-202ENST00000415758 LPIN3Q9BQK8 851 aa16.68■□□□□ 0.26
DDX56-202ENST00000415758 GKN1Q9NS71 199 aa16.68■□□□□ 0.26
DDX56-202ENST00000415758 CPSF3Q9UKF6 684 aaKnown RBP16.68■□□□□ 0.26
DDX56-202ENST00000415758 DSEQ9UL01 958 aa16.68■□□□□ 0.26
DDX56-202ENST00000415758 DERAQ9Y315 318 aa16.68■□□□□ 0.26
DDX56-202ENST00000415758 SCN1AP35498 2009 aa16.67■□□□□ 0.26
DDX56-202ENST00000415758 NPHP3-ACAD11A0A0J9YXS1 232 aa16.67■□□□□ 0.26
DDX56-202ENST00000415758 SOBPA7XYQ1 873 aa16.67■□□□□ 0.26
DDX56-202ENST00000415758 TRDMT1O14717 391 aaKnown RBP16.67■□□□□ 0.26
DDX56-202ENST00000415758 HNRNPDLO14979 420 aaKnown RBP16.67■□□□□ 0.26
DDX56-202ENST00000415758 RPP40O75818 363 aaKnown RBP16.67■□□□□ 0.26
DDX56-202ENST00000415758 AKAP3O75969 853 aa16.67■□□□□ 0.26
DDX56-202ENST00000415758 EPN2O95208 641 aa16.67■□□□□ 0.26
DDX56-202ENST00000415758 PMLP29590 882 aa16.67■□□□□ 0.26
DDX56-202ENST00000415758 SHC2P98077 582 aa16.67■□□□□ 0.26
DDX56-202ENST00000415758 CYP4F8P98187 520 aa16.67■□□□□ 0.26
DDX56-202ENST00000415758 VEPH1Q14D04 833 aa16.67■□□□□ 0.26
DDX56-202ENST00000415758 ZRSR1Q15695 479 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms