RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 ARHGAP25P42331 645 aa15.19■□□□□ 0.02
HMGA1P1-201ENST00000415560 CLCNKBP51801 687 aa15.19■□□□□ 0.02
HMGA1P1-201ENST00000415560 NDST1P52848 882 aa15.19■□□□□ 0.02
HMGA1P1-201ENST00000415560 RAD23BP54727 409 aa15.19■□□□□ 0.02
HMGA1P1-201ENST00000415560 UPP1Q16831 310 aa15.19■□□□□ 0.02
HMGA1P1-201ENST00000415560 CLEC16AQ2KHT3 1053 aa15.19■□□□□ 0.02
HMGA1P1-201ENST00000415560 METTL23Q86XA0 190 aa15.19■□□□□ 0.02
HMGA1P1-201ENST00000415560 NPAS4Q8IUM7 802 aa15.19■□□□□ 0.02
HMGA1P1-201ENST00000415560 TMEM86AQ8N2M4 240 aa15.19■□□□□ 0.02
HMGA1P1-201ENST00000415560 TRIM11Q96F44 468 aa15.19■□□□□ 0.02
HMGA1P1-201ENST00000415560 ALS2CR12Q96Q35 445 aa15.19■□□□□ 0.02
HMGA1P1-201ENST00000415560 MRPL9Q9BYD2 267 aaKnown RBP15.19■□□□□ 0.02
HMGA1P1-201ENST00000415560 SDCBP2Q9H190 292 aa15.19■□□□□ 0.02
HMGA1P1-201ENST00000415560 NENFQ9UMX5 172 aa15.19■□□□□ 0.02
HMGA1P1-201ENST00000415560 A0A0A6YYK5 440 aaPredicted RBP15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 CASTOR2A6NHX0 329 aa15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 KIF4AO95239 1232 aa15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 CASQ1P31415 396 aa15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 NSFP46459 744 aaKnown RBP15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 LHX1P48742 406 aa15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 GALCP54803 685 aa15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 GPC5P78333 572 aa15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 SOWAHAQ2M3V2 549 aa15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 SGO2Q562F6 1265 aa15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 ZNF569Q5MCW4 686 aa15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 MFSD5Q6N075 450 aa15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 TMEM130Q8N3G9 435 aa15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 SLC4A11Q8NBS3 891 aa15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 TMEM35BQ8NCS4 154 aa15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 SPATA18Q8TC71 538 aa15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 ZNF592Q92610 1267 aa15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 TNIP3Q96KP6 325 aa15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 SENP8Q96LD8 212 aa15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 NOX5Q96PH1 765 aa15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 LACRTQ9GZZ8 138 aa15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 ACP6Q9NPH0 428 aa15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 DSEQ9UL01 958 aa15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 PCDHGC3Q9UN70 934 aa15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 PAXBP1Q9Y5B6 917 aa15.18■□□□□ 0.02
HMGA1P1-201ENST00000415560 TRAPPC3O43617 180 aa15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 B3GAT3O94766 335 aa15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 LSM8O95777 96 aaKnown RBP15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 CYP1A1P04798 512 aaPredicted RBP15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 MYBL1P10243 752 aa15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 ODC1P11926 461 aa15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 EN2P19622 333 aaPredicted RBP15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 WARSP23381 471 aaKnown RBP15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 NOP2P46087 812 aaKnown RBP15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 AFF1P51825 1210 aaKnown RBP15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 CNGA2Q16280 664 aa15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 CLLU1OSQ5K130 101 aa15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 LIN9Q5TKA1 542 aa15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 SYT10Q6XYQ8 523 aa15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 RHOT2Q8IXI1 618 aa15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 ADGRF2Q8IZF7 708 aa15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 MSANTD4Q8NCY6 345 aa15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 TRIM58Q8NG06 486 aa15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 WHAMMQ8TF30 809 aa15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 VCPIP1Q96JH7 1222 aa15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 PCDHB18PQ96TA0 734 aa15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 MRPL45Q9BRJ2 306 aaKnown RBP15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 COLEC11Q9BWP8 271 aa15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 LHX5Q9H2C1 402 aa15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 DNAI1Q9UI46 699 aa15.17■□□□□ 0.02
HMGA1P1-201ENST00000415560 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.16■□□□□ 0.02
HMGA1P1-201ENST00000415560 MACROD2A1Z1Q3 448 aa15.16■□□□□ 0.02
HMGA1P1-201ENST00000415560 TRIM43BA6NCK2 446 aa15.16■□□□□ 0.02
HMGA1P1-201ENST00000415560 RCCD1A6NED2 376 aa15.16■□□□□ 0.02
HMGA1P1-201ENST00000415560 SPTLC1O15269 473 aa15.16■□□□□ 0.02
HMGA1P1-201ENST00000415560 AMHP03971 560 aa15.16■□□□□ 0.02
HMGA1P1-201ENST00000415560 ALDH2P05091 517 aa15.16■□□□□ 0.02
HMGA1P1-201ENST00000415560 FGFR1P11362 822 aa15.16■□□□□ 0.02
HMGA1P1-201ENST00000415560 UNGP13051 313 aaPredicted RBP15.16■□□□□ 0.02
HMGA1P1-201ENST00000415560 ABCB4P21439 1286 aa15.16■□□□□ 0.02
HMGA1P1-201ENST00000415560 BRD2P25440 801 aaKnown RBP15.16■□□□□ 0.02
HMGA1P1-201ENST00000415560 OR1G1P47890 313 aa15.16■□□□□ 0.02
HMGA1P1-201ENST00000415560 SNX16P57768 344 aa15.16■□□□□ 0.02
HMGA1P1-201ENST00000415560 LIMS2Q7Z4I7 341 aa15.16■□□□□ 0.02
HMGA1P1-201ENST00000415560 CRYBG2Q8N1P7 616 aa15.16■□□□□ 0.02
HMGA1P1-201ENST00000415560 TRIM43Q96BQ3 446 aaPredicted RBP15.16■□□□□ 0.02
HMGA1P1-201ENST00000415560 CYFIP2Q96F07 1278 aa15.16■□□□□ 0.02
HMGA1P1-201ENST00000415560 CASD1Q96PB1 797 aa15.16■□□□□ 0.02
HMGA1P1-201ENST00000415560 ELOVL4Q9GZR5 314 aa15.16■□□□□ 0.02
HMGA1P1-201ENST00000415560 TBC1D13Q9NVG8 400 aa15.16■□□□□ 0.02
HMGA1P1-201ENST00000415560 HESX1Q9UBX0 185 aa15.16■□□□□ 0.02
HMGA1P1-201ENST00000415560 A0A0U1RQJ8 604 aa15.15■□□□□ 0.02
HMGA1P1-201ENST00000415560 TMEM189-UBE2V1I3L0A0 370 aa15.15■□□□□ 0.02
HMGA1P1-201ENST00000415560 CALB1P05937 261 aa15.15■□□□□ 0.02
HMGA1P1-201ENST00000415560 CENPCQ03188 943 aa15.15■□□□□ 0.02
HMGA1P1-201ENST00000415560 DSC1Q08554 894 aa15.15■□□□□ 0.02
HMGA1P1-201ENST00000415560 PPIGQ13427 754 aaKnown RBP eCLIP15.15■□□□□ 0.02
HMGA1P1-201ENST00000415560 COLGALT2Q8IYK4 626 aa15.15■□□□□ 0.02
HMGA1P1-201ENST00000415560 THEM5Q8N1Q8 247 aa15.15■□□□□ 0.02
HMGA1P1-201ENST00000415560 PDCL2Q8N4E4 241 aa15.15■□□□□ 0.02
HMGA1P1-201ENST00000415560 OLIG1Q8TAK6 271 aa15.15■□□□□ 0.02
HMGA1P1-201ENST00000415560 UBE2Q2Q8WVN8 375 aa15.15■□□□□ 0.02
HMGA1P1-201ENST00000415560 ATRIPQ8WXE1 791 aa15.15■□□□□ 0.02
HMGA1P1-201ENST00000415560 TMEM175Q9BSA9 504 aa15.15■□□□□ 0.02
HMGA1P1-201ENST00000415560 PACSIN1Q9BY11 444 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms