RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 NKX6-1P78426 367 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 MRPS35P82673 323 aaKnown RBP4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 PTPRRQ15256 657 aa4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 SF3B3Q15393 1217 aaKnown RBP4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 SSH3Q8TE77 659 aa4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 DDX17Q92841 729 aaKnown RBP4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 HPS3Q969F9 1004 aa4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 C1GALT1C1Q96EU7 318 aa4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 MVB12AQ96EY5 273 aa4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 PGBD1Q96JS3 809 aa4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 VKORC1Q9BQB6 163 aa4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 GTPBP4Q9BZE4 634 aaKnown RBP4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 PNPOQ9NVS9 261 aa4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 IP6K2Q9UHH9 426 aa4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 COX11Q9Y6N1 276 aa4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 SMARCA2P51531 1590 aa4.64□□□□□ -1.67
HMGB3P23-201ENST00000414981 COL11A2P13942 1736 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P23-201ENST00000414981 CCDC151A5D8V7 595 aa4.63□□□□□ -1.67
HMGB3P23-201ENST00000414981 YY2O15391 372 aa4.63□□□□□ -1.67
HMGB3P23-201ENST00000414981 RARBP10826 455 aa4.63□□□□□ -1.67
HMGB3P23-201ENST00000414981 PLA2G5P39877 138 aa4.63□□□□□ -1.67
HMGB3P23-201ENST00000414981 ELLP55199 621 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P23-201ENST00000414981 SIM1P81133 766 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P23-201ENST00000414981 MCL1Q07820 350 aa4.63□□□□□ -1.67
HMGB3P23-201ENST00000414981 TTF1Q15361 905 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P23-201ENST00000414981 NBPF8Q3BBV2 869 aa4.63□□□□□ -1.67
HMGB3P23-201ENST00000414981 CD300EQ496F6 205 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P23-201ENST00000414981 HSP90AB4PQ58FF6 505 aa4.63□□□□□ -1.67
HMGB3P23-201ENST00000414981 TAPT1Q6NXT6 567 aa4.63□□□□□ -1.67
HMGB3P23-201ENST00000414981 ADGRG5Q8IZF4 528 aa4.63□□□□□ -1.67
HMGB3P23-201ENST00000414981 NSUN7Q8NE18 718 aaKnown RBP4.63□□□□□ -1.67
HMGB3P23-201ENST00000414981 SNX19Q92543 992 aa4.63□□□□□ -1.67
HMGB3P23-201ENST00000414981 NELL1Q92832 810 aa4.63□□□□□ -1.67
HMGB3P23-201ENST00000414981 C1orf43Q9BWL3 253 aa4.63□□□□□ -1.67
HMGB3P23-201ENST00000414981 LMBRD1Q9NUN5 540 aa4.63□□□□□ -1.67
HMGB3P23-201ENST00000414981 ABCF2Q9UG63 623 aa4.63□□□□□ -1.67
HMGB3P23-201ENST00000414981 CLIP1P30622 1438 aa4.63□□□□□ -1.67
HMGB3P23-201ENST00000414981 PEG3Q9GZU2 1588 aa4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 SMARCA4P51532 1647 aa4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 POLRMTO00411 1230 aaKnown RBP4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 TOR1BO14657 336 aa4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 MATN4O95460 622 aa4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 PF4V1P10720 104 aa4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 IL12RB1P42701 662 aa4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 CACNA2D1P54289 1103 aa4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 NXPH1P58417 271 aa4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 PSMC1P62191 440 aaKnown RBP4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 DPY19L2P1Q6NXN4 242 aa4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 CATIPQ7Z7H3 387 aa4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 USP37Q86T82 979 aa4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 ADGRG3Q86Y34 549 aa4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 FAM98AQ8NCA5 519 aaKnown RBP4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 SLC30A5Q8TAD4 765 aa4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 TMEM125Q96AQ2 219 aa4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 CDK5RAP3Q96JB5 506 aa4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 OSBPL9Q96SU4 736 aa4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 MAP3K14Q99558 947 aa4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 DUSP26Q9BV47 211 aa4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 CNPPD1Q9BV87 410 aa4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 MYH16Q9H6N6 1097 aa4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 ETAA1Q9NY74 926 aa4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 FEZ2Q9UHY8 353 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 TLK1Q9UKI8 766 aa4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 SOGA1O94964 1423 aa4.62□□□□□ -1.67
HMGB3P23-201ENST00000414981 ZNF785A8K8V0 405 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 F5H697 171 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 TRIAP1O43715 76 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 OFD1O75665 1012 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 RFPL1O75677 317 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 GNAI2P04899 355 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 NPTX2P47972 431 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 EPHB1P54762 984 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 ITIH3Q06033 890 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 GTF2H3Q13889 308 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 ZNF362Q5T0B9 420 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 EMC10Q5UCC4 262 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 KAZNQ674X7 775 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 FBXO42Q6P3S6 717 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 PPP1R32Q7Z5V6 425 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 PPP1R3BQ86XI6 285 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 CNPY4Q8N129 248 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 ACTRT2Q8TDY3 377 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 TNPO1Q92973 898 aaKnown RBP4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 AIFM3Q96NN9 605 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 NELL2Q99435 816 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 HEPHQ9BQS7 1158 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 RHOBTB2Q9BYZ6 727 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 SLC12A5Q9H2X9 1139 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 SLC17A6Q9P2U8 582 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 DHX57Q6P158 1386 aaKnown RBP4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 RRBP1Q9P2E9 1410 aaKnown RBP4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 MAP3K1Q13233 1512 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 ERICH3Q5RHP9 1530 aa4.61□□□□□ -1.67
HMGB3P23-201ENST00000414981 A0A0B4J269 797 aa4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 H3BUI4 141 aa4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 CCER2I3L3R5 266 aa4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 AKAP10O43572 662 aa4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 ORC4O43929 436 aa4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 CT47B1P0C2W7 299 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P23-201ENST00000414981 FBLP22087 321 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms