RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 ABCD1P33897 745 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 AARSP49588 968 aaKnown RBP eCLIP6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 LILRA4P59901 499 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 TFAMQ00059 246 aaKnown RBP6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 AMPD3Q01432 767 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 ADCY1Q08828 1119 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 SIGLEC14Q08ET2 396 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 ALCAMQ13740 583 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 POSTNQ15063 836 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 FAM26FQ5R3K3 315 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 LMBRD2Q68DH5 695 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 ATL3Q6DD88 541 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 SLC8B1Q6J4K2 584 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 ARMCX5Q6P1M9 558 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 UNC13DQ70J99 1090 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 BRSK2Q8IWQ3 736 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 CD302Q8IX05 232 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 NELFCDQ8IXH7 590 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 APPL2Q8NEU8 664 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 ZNF461Q8TAF7 563 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 ITFG1Q8TB96 612 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 ING5Q8WYH8 240 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 PBXIP1Q96AQ6 731 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 ACSF2Q96CM8 615 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 ASIC4Q96FT7 647 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 SENP8Q96LD8 212 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 PGLYRP2Q96PD5 576 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 TMEM209Q96SK2 561 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 C7orf25Q9BPX7 421 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 LRRC27Q9C0I9 530 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 CUEDC2Q9H467 287 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 ASB7Q9H672 318 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 KCNK12Q9HB15 430 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 CYP4F11Q9HBI6 524 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 PDE11AQ9HCR9 933 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 SLC39A2Q9NP94 309 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 DPP3Q9NY33 737 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 RBAKQ9NYW8 714 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 DNMT3BQ9UBC3 853 aaKnown RBP6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 KCNH3Q9ULD8 1083 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 SORCS3Q9UPU3 1222 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 WDR87Q6ZQQ6 2873 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 TSC2P49815 1807 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 PTPRJQ12913 1337 aa6.24□□□□□ -1.41
HMGB1P20-201ENST00000402555 ZFHX2Q9C0A1 2572 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 ANO9A1A5B4 782 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 PIRO00625 290 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 CLIC2O15247 247 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 KLRC4O43908 158 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 EXTL3O43909 919 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 XYLBO75191 536 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 OAZ2O95190 189 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 IL18RAPO95256 599 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 PAPLNO95428 1278 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 LRG1P02750 347 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 SLFN14P0C7P3 912 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 LAMP2P13473 410 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 ATF2P15336 505 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 GARTP22102 1010 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 POLR2BP30876 1174 aaKnown RBP6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 HOXA9P31269 272 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 ELF1P32519 619 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 CYP2J2P51589 502 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 NDUFA8P51970 172 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 VCPP55072 806 aaKnown RBP6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 KRT85P78386 507 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 YWHAHQ04917 246 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 EHHADHQ08426 723 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 MTMR3Q13615 1198 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 PTPRNQ16849 979 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 SLC5A9Q2M3M2 681 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 PABPC1LQ4VXU2 614 aaKnown RBP6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 OVOS1Q6IE37 1185 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 CNNM4Q6P4Q7 775 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 CYP26C1Q6V0L0 522 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 STXBP4Q6ZWJ1 553 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 EPM2AIP1Q7L775 607 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 USP37Q86T82 979 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 CBWD2Q8IUF1 395 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 TCEAL8Q8IYN2 117 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 CEP57L1Q8IYX8 460 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 GPD1LQ8N335 351 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 TTC9BQ8N6N2 239 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 C1orf127Q8N9H9 656 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 FSIP1Q8NA03 581 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 OR10T2Q8NGX3 314 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 ZNF507Q8TCN5 953 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 SCFD1Q8WVM8 642 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 PAGE5Q96GU1 130 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 PYM1Q9BRP8 204 aaKnown RBP6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 RPP25Q9BUL9 199 aaKnown RBP6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 RHOBTB2Q9BYZ6 727 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 CRISPLD1Q9H336 500 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 GOLPH3LQ9H4A5 285 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 TMEM206Q9H813 350 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 MAGEF1Q9HAY2 307 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 HSPBP1Q9NZL4 362 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 DERAQ9Y315 318 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 HCN4Q9Y3Q4 1203 aa6.23□□□□□ -1.41
HMGB1P20-201ENST00000402555 C2CD2Q9Y426 696 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms