RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 SIGLEC16A6NMB1 481 aa18.01■□□□□ 0.47
PTPRA-205ENST00000399903 FAM200BP0CF97 657 aa18.01■□□□□ 0.47
PTPRA-205ENST00000399903 OCRLQ01968 901 aa18.01■□□□□ 0.47
PTPRA-205ENST00000399903 AP1B1Q10567 949 aa18.01■□□□□ 0.47
PTPRA-205ENST00000399903 TMED1Q13445 227 aa18.01■□□□□ 0.47
PTPRA-205ENST00000399903 AGBL1Q96MI9 1066 aa18.01■□□□□ 0.47
PTPRA-205ENST00000399903 SPATA16Q9BXB7 569 aa18.01■□□□□ 0.47
PTPRA-205ENST00000399903 ANKFY1Q9P2R3 1169 aa18.01■□□□□ 0.47
PTPRA-205ENST00000399903 KITP10721 976 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 RALAP11233 206 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 ETS1P14921 441 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 FAM178BQ8IXR5 827 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 TIPINQ9BVW5 301 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 TRIM55Q9BYV6 548 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 MMADHCQ9H3L0 296 aaPredicted RBP18■□□□□ 0.47
PTPRA-205ENST00000399903 TAS2R1Q9NYW7 299 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 FOCADQ5VW36 1801 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 SLC45A4Q5BKX6 768 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 ETNPPLQ8TBG4 499 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 GATA6Q92908 595 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 IFT43Q96FT9 208 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 CFAP57Q96MR6 1250 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 ASCC2Q9H1I8 757 aaPredicted RBP18■□□□□ 0.47
PTPRA-205ENST00000399903 ZNF148Q9UQR1 794 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 SIPA1L1O43166 1804 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 PI4K2BG5E9Z4 385 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 ENTPD3O75355 529 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 OR6B1O95007 311 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 PGM3O95394 542 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 SPATA31C1P0DKV0 1188 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 CD58P19256 250 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 CXCL9Q07325 125 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 NR1H3Q13133 447 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 FAM182AQ5T1J6 154 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 C1orf146Q5VVC0 180 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 NOP9Q86U38 636 aaKnown RBP18■□□□□ 0.47
PTPRA-205ENST00000399903 DDX27Q96GQ7 796 aaKnown RBP18■□□□□ 0.47
PTPRA-205ENST00000399903 MPP4Q96JB8 637 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 WDR18Q9BV38 432 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 MAK16Q9BXY0 300 aaKnown RBP18■□□□□ 0.47
PTPRA-205ENST00000399903 LRRC19Q9H756 370 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 SMYD3Q9H7B4 428 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 DDX18Q9NVP1 670 aaKnown RBP18■□□□□ 0.47
PTPRA-205ENST00000399903 NDE1Q9NXR1 346 aa18■□□□□ 0.47
PTPRA-205ENST00000399903 LARSQ9P2J5 1176 aaKnown RBP18■□□□□ 0.47
PTPRA-205ENST00000399903 GOLGA8IPA6NC78 632 aa17.99■□□□□ 0.47
PTPRA-205ENST00000399903 ARHGAP42A6NI28 874 aa17.99■□□□□ 0.47
PTPRA-205ENST00000399903 GOLGA8JA6NMD2 632 aa17.99■□□□□ 0.47
PTPRA-205ENST00000399903 SLC16A3O15427 465 aaKnown RBP17.99■□□□□ 0.47
PTPRA-205ENST00000399903 KRT5P13647 590 aa17.99■□□□□ 0.47
PTPRA-205ENST00000399903 EFTUD2Q15029 972 aaKnown RBP eCLIP17.99■□□□□ 0.471e-6■■■■■ 34.9
PTPRA-205ENST00000399903 LIN52Q52LA3 116 aa17.99■□□□□ 0.47
PTPRA-205ENST00000399903 ODR4Q5SWX8 454 aa17.99■□□□□ 0.47
PTPRA-205ENST00000399903 C6orf163Q5TEZ5 329 aa17.99■□□□□ 0.47
PTPRA-205ENST00000399903 CCDC127Q96BQ5 260 aa17.99■□□□□ 0.47
PTPRA-205ENST00000399903 MARCOQ9UEW3 520 aaPredicted RBP17.99■□□□□ 0.47
PTPRA-205ENST00000399903 COL4A5P29400 1685 aa17.99■□□□□ 0.47
PTPRA-205ENST00000399903 ATP6V1G1O75348 118 aa17.99■□□□□ 0.47
PTPRA-205ENST00000399903 CIB2O75838 187 aa17.99■□□□□ 0.47
PTPRA-205ENST00000399903 ZWINTO95229 277 aa17.99■□□□□ 0.47
PTPRA-205ENST00000399903 ATF7P17544 494 aaPredicted RBP17.99■□□□□ 0.47
PTPRA-205ENST00000399903 DSG1Q02413 1049 aa17.99■□□□□ 0.47
PTPRA-205ENST00000399903 SPIRE1Q08AE8 756 aa17.99■□□□□ 0.47
PTPRA-205ENST00000399903 CETN1Q12798 172 aa17.99■□□□□ 0.47
PTPRA-205ENST00000399903 DBN1Q16643 649 aa17.99■□□□□ 0.47
PTPRA-205ENST00000399903 RHBDF2Q6PJF5 856 aa17.99■□□□□ 0.47
PTPRA-205ENST00000399903 ST13P4Q8IZP2 240 aaPredicted RBP17.99■□□□□ 0.47
PTPRA-205ENST00000399903 TMEM120AQ9BXJ8 343 aa17.99■□□□□ 0.47
PTPRA-205ENST00000399903 ATXN10Q9UBB4 475 aa17.99■□□□□ 0.47
PTPRA-205ENST00000399903 NEU2Q9Y3R4 380 aa17.99■□□□□ 0.47
PTPRA-205ENST00000399903 MYBPC3Q14896 1274 aa17.98■□□□□ 0.47
PTPRA-205ENST00000399903 RASSF3Q86WH2 238 aa17.98■□□□□ 0.47
PTPRA-205ENST00000399903 ATL2Q8NHH9 583 aa17.98■□□□□ 0.47
PTPRA-205ENST00000399903 GRK7Q8WTQ7 553 aa17.98■□□□□ 0.47
PTPRA-205ENST00000399903 GMCL1Q96IK5 515 aa17.98■□□□□ 0.47
PTPRA-205ENST00000399903 ZNF341Q9BYN7 854 aa17.98■□□□□ 0.47
PTPRA-205ENST00000399903 ANGPTL2Q9UKU9 493 aa17.98■□□□□ 0.47
PTPRA-205ENST00000399903 ZC3H3Q8IXZ2 948 aaKnown RBP17.98■□□□□ 0.47
PTPRA-205ENST00000399903 GMCL1P1Q8NEA9 526 aa17.98■□□□□ 0.47
PTPRA-205ENST00000399903 FBXO27Q8NI29 283 aa17.98■□□□□ 0.47
PTPRA-205ENST00000399903 DTNBP1Q96EV8 351 aa17.98■□□□□ 0.47
PTPRA-205ENST00000399903 ZWILCHQ9H900 591 aa17.98■□□□□ 0.47
PTPRA-205ENST00000399903 SLC17A7Q9P2U7 560 aa17.98■□□□□ 0.47
PTPRA-205ENST00000399903 PPARGC1AQ9UBK2 798 aaKnown RBP17.98■□□□□ 0.47
PTPRA-205ENST00000399903 CNTNAP1P78357 1384 aa17.98■□□□□ 0.47
PTPRA-205ENST00000399903 C2CD2LO14523 706 aa17.98■□□□□ 0.47
PTPRA-205ENST00000399903 IVDP26440 423 aa17.98■□□□□ 0.47
PTPRA-205ENST00000399903 CYP1B1Q16678 543 aa17.98■□□□□ 0.47
PTPRA-205ENST00000399903 ACBD5Q5T8D3 534 aaPredicted RBP17.98■□□□□ 0.47
PTPRA-205ENST00000399903 SAMD7Q7Z3H4 446 aa17.98■□□□□ 0.47
PTPRA-205ENST00000399903 SPATA24Q86W54 205 aa17.98■□□□□ 0.47
PTPRA-205ENST00000399903 DCLK3Q9C098 648 aa17.98■□□□□ 0.47
PTPRA-205ENST00000399903 STX18Q9P2W9 335 aaKnown RBP17.98■□□□□ 0.47
PTPRA-205ENST00000399903 GJA3Q9Y6H8 435 aa17.98■□□□□ 0.47
PTPRA-205ENST00000399903 SLC4A7Q9Y6M7 1214 aa17.98■□□□□ 0.47
PTPRA-205ENST00000399903 WNT10BO00744 389 aa17.97■□□□□ 0.47
PTPRA-205ENST00000399903 MAP7Q14244 749 aa17.97■□□□□ 0.47
PTPRA-205ENST00000399903 SYCP2LQ5T4T6 812 aa17.97■□□□□ 0.47
PTPRA-205ENST00000399903 ALYREFQ86V81 257 aaKnown RBP17.97■□□□□ 0.47
PTPRA-205ENST00000399903 NIM1KQ8IY84 436 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms