RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 B4GALNT4Q76KP1 1039 aa18.77■□□□□ 0.59
HLA-DQB1-204ENST00000399084 PASD1Q8IV76 773 aa18.77■□□□□ 0.59
HLA-DQB1-204ENST00000399084 BCAS4Q8TDM0 211 aa18.77■□□□□ 0.59
HLA-DQB1-204ENST00000399084 CENPTQ96BT3 561 aa18.77■□□□□ 0.59
HLA-DQB1-204ENST00000399084 ZBTB9Q96C00 473 aa18.77■□□□□ 0.59
HLA-DQB1-204ENST00000399084 TRAIPQ9BWF2 469 aa18.77■□□□□ 0.59
HLA-DQB1-204ENST00000399084 EPN3Q9H201 632 aa18.77■□□□□ 0.59
HLA-DQB1-204ENST00000399084 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.77■□□□□ 0.59
HLA-DQB1-204ENST00000399084 SLC5A4Q9NY91 659 aa18.77■□□□□ 0.59
HLA-DQB1-204ENST00000399084 DRG1Q9Y295 367 aaKnown RBP18.77■□□□□ 0.59
HLA-DQB1-204ENST00000399084 RRN3P2A6NIE6 340 aa18.76■□□□□ 0.59
HLA-DQB1-204ENST00000399084 SIGLEC16A6NMB1 481 aa18.76■□□□□ 0.59
HLA-DQB1-204ENST00000399084 EBAG9O00559 213 aa18.76■□□□□ 0.59
HLA-DQB1-204ENST00000399084 CALCAP01258 141 aa18.76■□□□□ 0.59
HLA-DQB1-204ENST00000399084 STAG3L1P0CL83 205 aa18.76■□□□□ 0.59
HLA-DQB1-204ENST00000399084 PPP2R2AP63151 447 aa18.76■□□□□ 0.59
HLA-DQB1-204ENST00000399084 KRT17Q04695 432 aa18.76■□□□□ 0.59
HLA-DQB1-204ENST00000399084 AMHR2Q16671 573 aa18.76■□□□□ 0.59
HLA-DQB1-204ENST00000399084 ODF2Q5BJF6 829 aa18.76■□□□□ 0.59
HLA-DQB1-204ENST00000399084 EEF1DP3Q658K8 133 aa18.76■□□□□ 0.59
HLA-DQB1-204ENST00000399084 RELL1Q8IUW5 271 aa18.76■□□□□ 0.59
HLA-DQB1-204ENST00000399084 CCDC50Q8IVM0 306 aa18.76■□□□□ 0.59
HLA-DQB1-204ENST00000399084 SH2D3CQ8N5H7 860 aa18.76■□□□□ 0.59
HLA-DQB1-204ENST00000399084 TLCD1Q96CP7 247 aa18.76■□□□□ 0.59
HLA-DQB1-204ENST00000399084 MS4A4AQ96JQ5 239 aa18.76■□□□□ 0.59
HLA-DQB1-204ENST00000399084 SCLT1Q96NL6 688 aa18.76■□□□□ 0.59
HLA-DQB1-204ENST00000399084 TRIM7Q9C029 511 aa18.76■□□□□ 0.59
HLA-DQB1-204ENST00000399084 ABHD16BQ9H3Z7 469 aa18.76■□□□□ 0.59
HLA-DQB1-204ENST00000399084 GGA2Q9UJY4 613 aa18.76■□□□□ 0.59
HLA-DQB1-204ENST00000399084 ITGA11Q9UKX5 1188 aa18.76■□□□□ 0.59
HLA-DQB1-204ENST00000399084 DERAQ9Y315 318 aa18.76■□□□□ 0.59
HLA-DQB1-204ENST00000399084 ZSWIM8A7E2V4 1837 aa18.75■□□□□ 0.59
HLA-DQB1-204ENST00000399084 CFHP08603 1231 aa18.75■□□□□ 0.59
HLA-DQB1-204ENST00000399084 RALAP11233 206 aa18.75■□□□□ 0.59
HLA-DQB1-204ENST00000399084 LSP1P33241 339 aa18.75■□□□□ 0.59
HLA-DQB1-204ENST00000399084 NFX1Q12986 1120 aaKnown RBP18.75■□□□□ 0.59
HLA-DQB1-204ENST00000399084 ZNF268Q14587 947 aaPredicted RBP18.75■□□□□ 0.59
HLA-DQB1-204ENST00000399084 DUSP28Q4G0W2 176 aa18.75■□□□□ 0.59
HLA-DQB1-204ENST00000399084 CPNE8Q86YQ8 564 aa18.75■□□□□ 0.59
HLA-DQB1-204ENST00000399084 TRAPPC12Q8WVT3 735 aa18.75■□□□□ 0.59
HLA-DQB1-204ENST00000399084 ADPGKQ9BRR6 497 aa18.75■□□□□ 0.59
HLA-DQB1-204ENST00000399084 C16orf70Q9BSU1 422 aa18.75■□□□□ 0.59
HLA-DQB1-204ENST00000399084 PLEKHA5Q9HAU0 1116 aa18.75■□□□□ 0.59
HLA-DQB1-204ENST00000399084 H3BRB1 525 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 GPR25O00155 361 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 B4GALT5O43286 388 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 CAPN15O75808 1086 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 AGTP01019 485 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 HMGCRP04035 888 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 CYP2C8P10632 490 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 CD58P19256 250 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 STILQ15468 1287 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 RHBDF2Q6PJF5 856 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 MTHFD1LQ6UB35 978 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 ZNF365Q70YC5 407 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 IPO4Q8TEX9 1081 aaKnown RBP18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 C1orf54Q8WWF1 131 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 TSPAN18Q96SJ8 248 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 KATNBL1Q9H079 304 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 EPB41L4BQ9H329 900 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 CENPHQ9H3R5 247 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 TUT1Q9H6E5 874 aaKnown RBP18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 MINDY3Q9H8M7 445 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 ASIC3Q9UHC3 531 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 PTPN22Q9Y2R2 807 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 LACTBL1A8MY62 500 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 KRT7P08729 469 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 CXCL8P10145 99 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 ATF2P15336 505 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 BRD2P25440 801 aaKnown RBP18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 IVDP26440 423 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 KCNJ1P48048 391 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 TAS2R40P59535 323 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 HADHQ16836 314 aaKnown RBP18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 WDR72Q3MJ13 1102 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 DCAF4L1Q3SXM0 396 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 MFSD5Q6N075 450 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 WDTC1Q8N5D0 677 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 C1orf127Q8N9H9 656 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 AFG1LQ8WV93 481 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 PDZD7Q9H5P4 517 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 SLC12A6Q9UHW9 1150 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 AKT3Q9Y243 479 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 NEU2Q9Y3R4 380 aa18.74■□□□□ 0.59
HLA-DQB1-204ENST00000399084 PLXNA1Q9UIW2 1896 aa18.73■□□□□ 0.59
HLA-DQB1-204ENST00000399084 A0A087WZ62 844 aa18.73■□□□□ 0.59
HLA-DQB1-204ENST00000399084 A0A1B0GUA9 196 aa18.73■□□□□ 0.59
HLA-DQB1-204ENST00000399084 FAM170AA1A519 330 aa18.73■□□□□ 0.59
HLA-DQB1-204ENST00000399084 RIPK2O43353 540 aa18.73■□□□□ 0.59
HLA-DQB1-204ENST00000399084 VDRP11473 427 aa18.73■□□□□ 0.59
HLA-DQB1-204ENST00000399084 ATP5DP30049 168 aa18.73■□□□□ 0.59
HLA-DQB1-204ENST00000399084 RBP5P82980 135 aa18.73■□□□□ 0.59
HLA-DQB1-204ENST00000399084 GRB14Q14449 540 aa18.73■□□□□ 0.59
HLA-DQB1-204ENST00000399084 SLC29A2Q14542 456 aa18.73■□□□□ 0.59
HLA-DQB1-204ENST00000399084 CNGA2Q16280 664 aa18.73■□□□□ 0.59
HLA-DQB1-204ENST00000399084 PTGISQ16647 500 aa18.73■□□□□ 0.59
HLA-DQB1-204ENST00000399084 DGKDQ16760 1214 aa18.73■□□□□ 0.59
HLA-DQB1-204ENST00000399084 TTC13Q8NBP0 860 aa18.73■□□□□ 0.59
HLA-DQB1-204ENST00000399084 OR2W6PQ8NHA6 318 aa18.73■□□□□ 0.59
HLA-DQB1-204ENST00000399084 PARK7Q99497 189 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms