RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 LCP1P13796 627 aa13.04□□□□□ -0.32
SOCS6-201ENST00000397942 PPP3CAQ08209 521 aa13.04□□□□□ -0.32
SOCS6-201ENST00000397942 CCNG2Q16589 344 aa13.04□□□□□ -0.32
SOCS6-201ENST00000397942 PRPF31Q8WWY3 499 aaKnown RBP13.04□□□□□ -0.32
SOCS6-201ENST00000397942 SLC24A3Q9HC58 644 aa13.04□□□□□ -0.32
SOCS6-201ENST00000397942 ANGPTL3Q9Y5C1 460 aa13.04□□□□□ -0.32
SOCS6-201ENST00000397942 TISP43B9A030 160 aa13.04□□□□□ -0.32
SOCS6-201ENST00000397942 IFI35P80217 286 aaPredicted RBP13.04□□□□□ -0.32
SOCS6-201ENST00000397942 OVGP1Q12889 678 aa13.04□□□□□ -0.32
SOCS6-201ENST00000397942 C1orf186Q6ZWK4 172 aa13.04□□□□□ -0.32
SOCS6-201ENST00000397942 C3orf20Q8ND61 904 aa13.04□□□□□ -0.32
SOCS6-201ENST00000397942 SCG3Q8WXD2 468 aaKnown RBP13.04□□□□□ -0.32
SOCS6-201ENST00000397942 ELMO3Q96BJ8 720 aa13.04□□□□□ -0.32
SOCS6-201ENST00000397942 MTMR12Q9C0I1 747 aa13.04□□□□□ -0.32
SOCS6-201ENST00000397942 GTSE1Q9NYZ3 720 aa13.04□□□□□ -0.32
SOCS6-201ENST00000397942 SPATA31A6Q5VVP1 1343 aa13.04□□□□□ -0.32
SOCS6-201ENST00000397942 SMAPO00193 183 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 SPAG6O75602 509 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 MOCS2O96007 188 aaPredicted RBP13.03□□□□□ -0.32
SOCS6-201ENST00000397942 DDR1Q08345 913 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 LONP2Q86WA8 852 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 IQCKQ8N0W5 287 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 EMC1Q8N766 993 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 HPDLQ96IR7 371 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 ZNF560Q96MR9 790 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 MMP19Q99542 508 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 TRIM56Q9BRZ2 755 aaKnown RBP13.03□□□□□ -0.32
SOCS6-201ENST00000397942 KCNMB3Q9NPA1 279 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 KIF20BQ96Q89 1820 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 PPFIA2O75334 1257 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 C11orf63Q6NUN7 778 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 TRIML2Q8N7C3 387 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 TMEM121Q9BTD3 319 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 NOD2Q9HC29 1040 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 KCNQ5Q9NR82 932 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 KIF22Q14807 665 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 EFCAB12Q6NXP0 572 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 PPIL6Q8IXY8 311 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 ST13P4Q8IZP2 240 aaPredicted RBP13.03□□□□□ -0.32
SOCS6-201ENST00000397942 CERS5Q8N5B7 392 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.03□□□□□ -0.32
SOCS6-201ENST00000397942 HBP1O60381 514 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 HNRNPCL1O60812 293 aaKnown RBP13.03□□□□□ -0.32
SOCS6-201ENST00000397942 ENO1P06733 434 aaKnown RBP13.03□□□□□ -0.32
SOCS6-201ENST00000397942 SCTRP47872 440 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 CTCFP49711 727 aaPredicted RBP13.03□□□□□ -0.32
SOCS6-201ENST00000397942 SLC12A3P55017 1021 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 BACE1P56817 501 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 DACT2Q5SW24 774 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 RNF135Q8IUD6 432 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 MKL1Q969V6 931 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 THTPAQ9BU02 230 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 WHRNQ9P202 907 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 ZNF263O14978 683 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 DYNC1LI2O43237 492 aaPredicted RBP13.03□□□□□ -0.32
SOCS6-201ENST00000397942 UBOX5O94941 541 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 CYP24A1Q07973 514 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 FASTKD1Q53R41 847 aaKnown RBP13.03□□□□□ -0.32
SOCS6-201ENST00000397942 MROH9Q5TGP6 573 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 EXD1Q8NHP7 514 aa13.03□□□□□ -0.32
SOCS6-201ENST00000397942 HSPA8P11142 646 aaKnown RBP13.02□□□□□ -0.32
SOCS6-201ENST00000397942 DPEP1P16444 411 aa13.02□□□□□ -0.32
SOCS6-201ENST00000397942 CCND1P24385 295 aa13.02□□□□□ -0.32
SOCS6-201ENST00000397942 PAPOLAP51003 745 aaKnown RBP13.02□□□□□ -0.32
SOCS6-201ENST00000397942 CLCN3P51790 818 aa13.02□□□□□ -0.32
SOCS6-201ENST00000397942 AP2B1P63010 937 aa13.02□□□□□ -0.32
SOCS6-201ENST00000397942 PRAMEP78395 509 aa13.02□□□□□ -0.32
SOCS6-201ENST00000397942 OTUD4Q01804 1114 aaKnown RBP13.02□□□□□ -0.32
SOCS6-201ENST00000397942 ANKRD20A4Q4UJ75 823 aa13.02□□□□□ -0.32
SOCS6-201ENST00000397942 ANKRD20A8PQ5CZ79 823 aa13.02□□□□□ -0.32
SOCS6-201ENST00000397942 ANKRD20A2Q5SQ80 823 aa13.02□□□□□ -0.32
SOCS6-201ENST00000397942 ANKRD20A1Q5TYW2 823 aa13.02□□□□□ -0.32
SOCS6-201ENST00000397942 ITPRIPL1Q6GPH6 555 aa13.02□□□□□ -0.32
SOCS6-201ENST00000397942 ZNF662Q6ZS27 426 aa13.02□□□□□ -0.32
SOCS6-201ENST00000397942 MSL3Q8N5Y2 521 aaKnown RBP13.02□□□□□ -0.32
SOCS6-201ENST00000397942 SUDS3Q9H7L9 328 aaPredicted RBP13.02□□□□□ -0.32
SOCS6-201ENST00000397942 ELP3Q9H9T3 547 aa13.02□□□□□ -0.32
SOCS6-201ENST00000397942 CISHQ9NSE2 258 aa13.02□□□□□ -0.32
SOCS6-201ENST00000397942 PCMTD2Q9NV79 361 aa13.02□□□□□ -0.32
SOCS6-201ENST00000397942 PIN4Q9Y237 131 aaKnown RBP13.02□□□□□ -0.32
SOCS6-201ENST00000397942 RPL21P46778 160 aaKnown RBP13.02□□□□□ -0.32
SOCS6-201ENST00000397942 NLRP11P59045 1033 aaKnown RBP13.02□□□□□ -0.32
SOCS6-201ENST00000397942 MYL6P60660 151 aa13.02□□□□□ -0.32
SOCS6-201ENST00000397942 MCL1Q07820 350 aa13.02□□□□□ -0.32
SOCS6-201ENST00000397942 EPS8L1Q8TE68 723 aa13.02□□□□□ -0.32
SOCS6-201ENST00000397942 HSD17B14Q9BPX1 270 aa13.02□□□□□ -0.32
SOCS6-201ENST00000397942 NAALADL1Q9UQQ1 740 aa13.02□□□□□ -0.32
SOCS6-201ENST00000397942 FRMPD4Q14CM0 1322 aa13.02□□□□□ -0.33
SOCS6-201ENST00000397942 HSD17B4P51659 736 aa13.02□□□□□ -0.33
SOCS6-201ENST00000397942 TFDP3Q5H9I0 405 aa13.02□□□□□ -0.33
SOCS6-201ENST00000397942 FAM111AQ96PZ2 611 aa13.02□□□□□ -0.33
SOCS6-201ENST00000397942 CD248Q9HCU0 757 aa13.02□□□□□ -0.33
SOCS6-201ENST00000397942 ERAP1Q9NZ08 941 aa13.02□□□□□ -0.33
SOCS6-201ENST00000397942 PPP1R12AO14974 1030 aaPredicted RBP13.02□□□□□ -0.33
SOCS6-201ENST00000397942 SYF2O95926 243 aaKnown RBP13.02□□□□□ -0.33
SOCS6-201ENST00000397942 GNAT1P11488 350 aa13.02□□□□□ -0.33
SOCS6-201ENST00000397942 VCAM1P19320 739 aa13.02□□□□□ -0.33
SOCS6-201ENST00000397942 TAC1P20366 129 aa13.02□□□□□ -0.33
SOCS6-201ENST00000397942 CPA2P48052 419 aa13.02□□□□□ -0.33
SOCS6-201ENST00000397942 GCNT1Q02742 428 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms