RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 TAS1R2Q8TE23 839 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 ZNF830Q96NB3 372 aaPredicted RBP14.23□□□□□ -0.13
SEC13-209ENST00000397117 PANX2Q96RD6 677 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 MTMR12Q9C0I1 747 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 RAB20Q9NX57 234 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 PARP2Q9UGN5 583 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 COQ4Q9Y3A0 265 aa14.23□□□□□ -0.13
SEC13-209ENST00000397117 PTPRJQ12913 1337 aa14.22□□□□□ -0.13
SEC13-209ENST00000397117 EPHB6O15197 1021 aa14.22□□□□□ -0.13
SEC13-209ENST00000397117 RECQL4O94761 1208 aa14.22□□□□□ -0.13
SEC13-209ENST00000397117 NOL4O94818 638 aa14.22□□□□□ -0.13
SEC13-209ENST00000397117 CXCL14O95715 111 aa14.22□□□□□ -0.13
SEC13-209ENST00000397117 UCHL3P15374 230 aa14.22□□□□□ -0.13
SEC13-209ENST00000397117 RAB27AP51159 221 aa14.22□□□□□ -0.13
SEC13-209ENST00000397117 APBA1Q02410 837 aa14.22□□□□□ -0.13
SEC13-209ENST00000397117 TMEM132DQ14C87 1099 aa14.22□□□□□ -0.13
SEC13-209ENST00000397117 WDR44Q5JSH3 913 aa14.22□□□□□ -0.13
SEC13-209ENST00000397117 JADE1Q6IE81 842 aa14.22□□□□□ -0.13
SEC13-209ENST00000397117 C15orf39Q6ZRI6 1047 aa14.22□□□□□ -0.13
SEC13-209ENST00000397117 NT5DC4Q86YG4 428 aa14.22□□□□□ -0.13
SEC13-209ENST00000397117 ZDHHC14Q8IZN3 488 aa14.22□□□□□ -0.13
SEC13-209ENST00000397117 CCDC112Q8NEF3 446 aa14.22□□□□□ -0.13
SEC13-209ENST00000397117 OR8K1Q8NGG5 319 aa14.22□□□□□ -0.13
SEC13-209ENST00000397117 SMOC2Q9H3U7 446 aa14.22□□□□□ -0.13
SEC13-209ENST00000397117 NLRC4Q9NPP4 1024 aa14.22□□□□□ -0.13
SEC13-209ENST00000397117 ABHD10Q9NUJ1 306 aa14.22□□□□□ -0.13
SEC13-209ENST00000397117 FAM105AQ9NUU6 356 aa14.22□□□□□ -0.13
SEC13-209ENST00000397117 ZNHIT6Q9NWK9 470 aaKnown RBP14.22□□□□□ -0.13
SEC13-209ENST00000397117 APEX2Q9UBZ4 518 aa14.22□□□□□ -0.13
SEC13-209ENST00000397117 DAAM1Q9Y4D1 1078 aa14.22□□□□□ -0.13
SEC13-209ENST00000397117 RNF225M0QZC1 329 aaPredicted RBP14.21□□□□□ -0.13
SEC13-209ENST00000397117 HLA-DRAP01903 254 aa14.21□□□□□ -0.13
SEC13-209ENST00000397117 NFICP08651 508 aa14.21□□□□□ -0.13
SEC13-209ENST00000397117 SKIP12755 728 aa14.21□□□□□ -0.13
SEC13-209ENST00000397117 RFX1P22670 979 aa14.21□□□□□ -0.13
SEC13-209ENST00000397117 AKAP5P24588 427 aa14.21□□□□□ -0.13
SEC13-209ENST00000397117 NBL1P41271 181 aa14.21□□□□□ -0.13
SEC13-209ENST00000397117 BCAR1P56945 870 aa14.21□□□□□ -0.13
SEC13-209ENST00000397117 LRMPQ12912 555 aa14.21□□□□□ -0.13
SEC13-209ENST00000397117 TRPC3Q13507 836 aa14.21□□□□□ -0.13
SEC13-209ENST00000397117 RRAGAQ7L523 313 aa14.21□□□□□ -0.13
SEC13-209ENST00000397117 TRAPPC11Q7Z392 1133 aa14.21□□□□□ -0.13
SEC13-209ENST00000397117 EFCAB13Q8IY85 973 aa14.21□□□□□ -0.13
SEC13-209ENST00000397117 C12orf76Q8N812 135 aaPredicted RBP14.21□□□□□ -0.13
SEC13-209ENST00000397117 SMG8Q8ND04 991 aaKnown RBP14.21□□□□□ -0.13
SEC13-209ENST00000397117 LMO3Q8TAP4 145 aa14.21□□□□□ -0.13
SEC13-209ENST00000397117 HELQQ8TDG4 1101 aa14.21□□□□□ -0.13
SEC13-209ENST00000397117 KIF12Q96FN5 646 aa14.21□□□□□ -0.13
SEC13-209ENST00000397117 FAM84AQ96KN4 292 aa14.21□□□□□ -0.13
SEC13-209ENST00000397117 SPAG5Q96R06 1193 aa14.21□□□□□ -0.13
SEC13-209ENST00000397117 IMPG2Q9BZV3 1241 aa14.21□□□□□ -0.13
SEC13-209ENST00000397117 NUCKS1Q9H1E3 243 aaKnown RBP14.21□□□□□ -0.13
SEC13-209ENST00000397117 GANQ9H2C0 597 aa14.21□□□□□ -0.13
SEC13-209ENST00000397117 SIX2Q9NPC8 291 aa14.21□□□□□ -0.13
SEC13-209ENST00000397117 FBXL5Q9UKA1 691 aa14.21□□□□□ -0.13
SEC13-209ENST00000397117 R3HCC1Q9Y3T6 440 aaKnown RBP14.21□□□□□ -0.13
SEC13-209ENST00000397117 C2CD2Q9Y426 696 aa14.21□□□□□ -0.13
SEC13-209ENST00000397117 DENND4AQ7Z401 1863 aa14.21□□□□□ -0.13
SEC13-209ENST00000397117 NT5C1B-RDH14C9J2C7 533 aa14.2□□□□□ -0.14
SEC13-209ENST00000397117 ZC3H11AO75152 810 aaKnown RBP eCLIP14.2□□□□□ -0.14
SEC13-209ENST00000397117 WEE2P0C1S8 567 aa14.2□□□□□ -0.14
SEC13-209ENST00000397117 ITGA4P13612 1032 aa14.2□□□□□ -0.14
SEC13-209ENST00000397117 NCOA4Q13772 614 aa14.2□□□□□ -0.14
SEC13-209ENST00000397117 RAPGEF1Q13905 1077 aa14.2□□□□□ -0.14
SEC13-209ENST00000397117 RARS2Q5T160 578 aaKnown RBP14.2□□□□□ -0.14
SEC13-209ENST00000397117 ASTLQ6HA08 431 aaPredicted RBP14.2□□□□□ -0.14
SEC13-209ENST00000397117 RNF169Q8NCN4 708 aa14.2□□□□□ -0.14
SEC13-209ENST00000397117 SLC22A17Q8WUG5 538 aa14.2□□□□□ -0.14
SEC13-209ENST00000397117 SEMA4DQ92854 862 aa14.2□□□□□ -0.14
SEC13-209ENST00000397117 NT5C1BQ96P26 610 aa14.2□□□□□ -0.14
SEC13-209ENST00000397117 DNAJC7Q99615 494 aa14.2□□□□□ -0.14
SEC13-209ENST00000397117 BAG1Q99933 345 aaPredicted RBP14.2□□□□□ -0.14
SEC13-209ENST00000397117 TRAIPQ9BWF2 469 aa14.2□□□□□ -0.14
SEC13-209ENST00000397117 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.2□□□□□ -0.143e-6■■■■■ 39.7
SEC13-209ENST00000397117 LIMD1Q9UGP4 676 aa14.2□□□□□ -0.14
SEC13-209ENST00000397117 DERAQ9Y315 318 aa14.2□□□□□ -0.14
SEC13-209ENST00000397117 FHOD1Q9Y613 1164 aa14.2□□□□□ -0.14
SEC13-209ENST00000397117 IRAK3Q9Y616 596 aa14.2□□□□□ -0.14
SEC13-209ENST00000397117 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.2□□□□□ -0.141e-11■□□□□ 8.3
SEC13-209ENST00000397117 PRR23AA6NEV1 266 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 LRRC53A6NM62 1247 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 MEFVO15553 781 aaPredicted RBP14.19□□□□□ -0.14
SEC13-209ENST00000397117 ASGR2P07307 311 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 SKILP12757 684 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 ALDH7A1P49419 539 aaKnown RBP14.19□□□□□ -0.14
SEC13-209ENST00000397117 ATAT1Q5SQI0 421 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 KIAA1841Q6NSI8 718 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 DPY19L2P1Q6NXN4 242 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 PGBD4Q96DM1 585 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 TSPAN18Q96SJ8 248 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 NAA15Q9BXJ9 866 aaKnown RBP14.19□□□□□ -0.14
SEC13-209ENST00000397117 MRPL9Q9BYD2 267 aaKnown RBP14.19□□□□□ -0.14
SEC13-209ENST00000397117 ZBP1Q9H171 429 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 RNF39Q9H2S5 420 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 KCNF1Q9H3M0 494 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 UBE2TQ9NPD8 197 aaPredicted RBP14.19□□□□□ -0.14
SEC13-209ENST00000397117 DZANK1Q9NVP4 752 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 KLK14Q9P0G3 267 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 CNTN3Q9P232 1028 aa14.19□□□□□ -0.14
SEC13-209ENST00000397117 DNAJC12Q9UKB3 198 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms