RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 PTPN7P35236 360 aa17.79■□□□□ 0.44
NUP50-202ENST00000396096 TNFAIP2Q03169 654 aa17.79■□□□□ 0.44
NUP50-202ENST00000396096 LLGL1Q15334 1064 aa17.79■□□□□ 0.44
NUP50-202ENST00000396096 AMHR2Q16671 573 aa17.79■□□□□ 0.44
NUP50-202ENST00000396096 ODF2Q5BJF6 829 aa17.79■□□□□ 0.44
NUP50-202ENST00000396096 CEP120Q8N960 986 aa17.79■□□□□ 0.44
NUP50-202ENST00000396096 EFCC1Q9HA90 598 aa17.79■□□□□ 0.44
NUP50-202ENST00000396096 USTQ9Y2C2 406 aa17.79■□□□□ 0.44
NUP50-202ENST00000396096 ATXN2Q99700 1313 aaKnown RBP17.79■□□□□ 0.44
NUP50-202ENST00000396096 GJB6O95452 261 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 GH1P01241 217 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 IQCF3P0C7M6 154 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 CXCL8P10145 99 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 INSRRP14616 1297 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 CORO7P57737 925 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 COPS2P61201 443 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 NFX1Q12986 1120 aaKnown RBP17.78■□□□□ 0.44
NUP50-202ENST00000396096 PIGHQ14442 188 aaPredicted RBP17.78■□□□□ 0.44
NUP50-202ENST00000396096 TNFAIP8L3Q5GJ75 292 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 DPY19L2Q6NUT2 758 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 DRICH1Q6PGQ1 229 aaPredicted RBP17.78■□□□□ 0.44
NUP50-202ENST00000396096 MAMDC4Q6UXC1 1216 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 B4GALNT4Q76KP1 1039 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 NLRP14Q86W24 1093 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 SPATS2Q86XZ4 545 aaKnown RBP17.78■□□□□ 0.44
NUP50-202ENST00000396096 BBOF1Q8ND07 529 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 MYCBPAPQ8TBZ2 947 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 CENPTQ96BT3 561 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 ROPN1BQ9BZX4 212 aaPredicted RBP17.78■□□□□ 0.44
NUP50-202ENST00000396096 ROPN1Q9HAT0 212 aaPredicted RBP17.78■□□□□ 0.44
NUP50-202ENST00000396096 SIX4Q9UIU6 781 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 STRIP2Q9ULQ0 834 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 CEP83Q9Y592 693 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 UNCXA6NJT0 531 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 GPR25O00155 361 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 FAM107AO95990 144 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 AGTP01019 485 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 ATF2P15336 505 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 FGFR4P22455 802 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 GSCP56915 257 aaPredicted RBP17.78■□□□□ 0.44
NUP50-202ENST00000396096 CCNA1P78396 465 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 KYAT1Q16773 422 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 TMEM132AQ24JP5 1023 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 ILDR2Q71H61 639 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 ANKS1BQ7Z6G8 1248 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 ERICH1Q86X53 443 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 GPRC5AQ8NFJ5 357 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 PPTC7Q8NI37 304 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 SLITRK1Q96PX8 696 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 TRAIPQ9BWF2 469 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 HEMGNQ9BXL5 484 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 VRTNQ9H8Y1 702 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 SLC45A1Q9Y2W3 748 aa17.78■□□□□ 0.44
NUP50-202ENST00000396096 MED7O43513 233 aa17.77■□□□□ 0.43
NUP50-202ENST00000396096 TRAPPC3O43617 180 aa17.77■□□□□ 0.43
NUP50-202ENST00000396096 CDR1P51861 262 aa17.77■□□□□ 0.43
NUP50-202ENST00000396096 OSTNP61366 133 aa17.77■□□□□ 0.43
NUP50-202ENST00000396096 OGDHQ02218 1023 aa17.77■□□□□ 0.43
NUP50-202ENST00000396096 LMNB2Q03252 620 aa17.77■□□□□ 0.43
NUP50-202ENST00000396096 ZNF394Q53GI3 561 aa17.77■□□□□ 0.43
NUP50-202ENST00000396096 ZNF667Q5HYK9 610 aa17.77■□□□□ 0.43
NUP50-202ENST00000396096 MFSD5Q6N075 450 aa17.77■□□□□ 0.43
NUP50-202ENST00000396096 SCARA5Q6ZMJ2 495 aa17.77■□□□□ 0.43
NUP50-202ENST00000396096 ZNF467Q7Z7K2 595 aaPredicted RBP17.77■□□□□ 0.43
NUP50-202ENST00000396096 TMEM192Q8IY95 271 aa17.77■□□□□ 0.43
NUP50-202ENST00000396096 CXorf38Q8TB03 319 aa17.77■□□□□ 0.43
NUP50-202ENST00000396096 ZNF473Q8WTR7 871 aaKnown RBP17.77■□□□□ 0.43
NUP50-202ENST00000396096 ZBTB10Q96DT7 871 aa17.77■□□□□ 0.43
NUP50-202ENST00000396096 ZNF668Q96K58 619 aaPredicted RBP17.77■□□□□ 0.43
NUP50-202ENST00000396096 SCLT1Q96NL6 688 aa17.77■□□□□ 0.43
NUP50-202ENST00000396096 MCEEQ96PE7 176 aa17.77■□□□□ 0.43
NUP50-202ENST00000396096 CCT8L2Q96SF2 557 aa17.77■□□□□ 0.43
NUP50-202ENST00000396096 CDC42EP4Q9H3Q1 356 aaKnown RBP17.77■□□□□ 0.43
NUP50-202ENST00000396096 RABEP2Q9H5N1 569 aa17.77■□□□□ 0.43
NUP50-202ENST00000396096 ASB7Q9H672 318 aa17.77■□□□□ 0.43
NUP50-202ENST00000396096 GGA2Q9UJY4 613 aa17.77■□□□□ 0.43
NUP50-202ENST00000396096 POLIQ9UNA4 740 aa17.77■□□□□ 0.43
NUP50-202ENST00000396096 MEFVO15553 781 aaPredicted RBP17.76■□□□□ 0.43
NUP50-202ENST00000396096 STAG3L1P0CL83 205 aa17.76■□□□□ 0.43
NUP50-202ENST00000396096 CYP2C8P10632 490 aa17.76■□□□□ 0.43
NUP50-202ENST00000396096 ATICP31939 592 aa17.76■□□□□ 0.43
NUP50-202ENST00000396096 SSR1P43307 286 aaKnown RBP17.76■□□□□ 0.43
NUP50-202ENST00000396096 MMP13P45452 471 aa17.76■□□□□ 0.43
NUP50-202ENST00000396096 ITGA8P53708 1063 aa17.76■□□□□ 0.43
NUP50-202ENST00000396096 LACTBP83111 547 aaPredicted RBP17.76■□□□□ 0.43
NUP50-202ENST00000396096 UBAP2Q5T6F2 1119 aaKnown RBP17.76■□□□□ 0.43
NUP50-202ENST00000396096 DENND1BQ6P3S1 775 aa17.76■□□□□ 0.43
NUP50-202ENST00000396096 DCUN1D2Q6PH85 259 aa17.76■□□□□ 0.43
NUP50-202ENST00000396096 CCDC89Q8N998 374 aa17.76■□□□□ 0.43
NUP50-202ENST00000396096 C1orf127Q8N9H9 656 aa17.76■□□□□ 0.43
NUP50-202ENST00000396096 CCDC114Q96M63 670 aa17.76■□□□□ 0.43
NUP50-202ENST00000396096 STMN4Q9H169 189 aaPredicted RBP17.76■□□□□ 0.43
NUP50-202ENST00000396096 PDZD7Q9H5P4 517 aa17.76■□□□□ 0.43
NUP50-202ENST00000396096 DDX56Q9NY93 547 aaKnown RBP17.76■□□□□ 0.43
NUP50-202ENST00000396096 SCN4AP35499 1836 aa17.76■□□□□ 0.43
NUP50-202ENST00000396096 GMNCA6NCL1 334 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 LACTBL1A8MY62 500 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 RGS16O15492 202 aaPredicted RBP17.75■□□□□ 0.43
NUP50-202ENST00000396096 NFICP08651 508 aa17.75■□□□□ 0.43
NUP50-202ENST00000396096 YBX3P16989 372 aaKnown RBP eCLIP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms