RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 PTGER3P43115 390 aa14.99□□□□□ -0.01
VCPKMT-201ENST00000395859 DUSP4Q13115 394 aa14.99□□□□□ -0.01
VCPKMT-201ENST00000395859 HNRNPDQ14103 355 aaKnown RBP14.99□□□□□ -0.01
VCPKMT-201ENST00000395859 NT5DC1Q5TFE4 455 aa14.99□□□□□ -0.01
VCPKMT-201ENST00000395859 NCAPH2Q6IBW4 605 aa14.99□□□□□ -0.01
VCPKMT-201ENST00000395859 CENPPQ6IPU0 288 aa14.99□□□□□ -0.01
VCPKMT-201ENST00000395859 MDGA1Q8NFP4 955 aa14.99□□□□□ -0.01
VCPKMT-201ENST00000395859 UBL7Q96S82 380 aaPredicted RBP14.99□□□□□ -0.01
VCPKMT-201ENST00000395859 P2RY13Q9BPV8 354 aa14.99□□□□□ -0.01
VCPKMT-201ENST00000395859 ESYT1Q9BSJ8 1104 aa14.99□□□□□ -0.01
VCPKMT-201ENST00000395859 SLC26A6Q9BXS9 759 aa14.99□□□□□ -0.01
VCPKMT-201ENST00000395859 SMG9Q9H0W8 520 aaKnown RBP14.99□□□□□ -0.01
VCPKMT-201ENST00000395859 CAPN10Q9HC96 672 aa14.99□□□□□ -0.01
VCPKMT-201ENST00000395859 THG1LQ9NWX6 298 aaKnown RBP14.99□□□□□ -0.01
VCPKMT-201ENST00000395859 PILRBQ9UKJ0 227 aa14.99□□□□□ -0.01
VCPKMT-201ENST00000395859 CCL26Q9Y258 94 aa14.99□□□□□ -0.01
VCPKMT-201ENST00000395859 PTPRQQ9UMZ3 2332 aa14.98□□□□□ -0.01
VCPKMT-201ENST00000395859 GJB3O75712 270 aa14.98□□□□□ -0.01
VCPKMT-201ENST00000395859 FGF19O95750 216 aa14.98□□□□□ -0.01
VCPKMT-201ENST00000395859 CPB1P15086 417 aa14.98□□□□□ -0.01
VCPKMT-201ENST00000395859 ARSAP15289 507 aa14.98□□□□□ -0.01
VCPKMT-201ENST00000395859 KCNE1P15382 129 aa14.98□□□□□ -0.01
VCPKMT-201ENST00000395859 U2AF2P26368 475 aaKnown RBP eCLIP14.98□□□□□ -0.01
VCPKMT-201ENST00000395859 RPL9P32969 192 aaKnown RBP14.98□□□□□ -0.01
VCPKMT-201ENST00000395859 P2RY2P41231 377 aa14.98□□□□□ -0.01
VCPKMT-201ENST00000395859 EPHB3P54753 998 aa14.98□□□□□ -0.01
VCPKMT-201ENST00000395859 GPR17Q13304 367 aa14.98□□□□□ -0.01
VCPKMT-201ENST00000395859 MAPK6Q16659 721 aa14.98□□□□□ -0.01
VCPKMT-201ENST00000395859 LARP1BQ659C4 914 aaKnown RBP14.98□□□□□ -0.01
VCPKMT-201ENST00000395859 ZBTB8OSQ8IWT0 167 aa14.98□□□□□ -0.01
VCPKMT-201ENST00000395859 FBXL16Q8N461 479 aa14.98□□□□□ -0.01
VCPKMT-201ENST00000395859 CEP120Q8N960 986 aa14.98□□□□□ -0.01
VCPKMT-201ENST00000395859 APPL2Q8NEU8 664 aa14.98□□□□□ -0.01
VCPKMT-201ENST00000395859 TSTD1Q8NFU3 115 aa14.98□□□□□ -0.01
VCPKMT-201ENST00000395859 EIF2AK1Q9BQI3 630 aaKnown RBP14.98□□□□□ -0.01
VCPKMT-201ENST00000395859 C2orf40Q9H1Z8 148 aa14.98□□□□□ -0.01
VCPKMT-201ENST00000395859 SLC38A7Q9NVC3 462 aa14.98□□□□□ -0.01
VCPKMT-201ENST00000395859 PCDHB8Q9UN66 801 aa14.98□□□□□ -0.01
VCPKMT-201ENST00000395859 COL12A1Q99715 3063 aa14.98□□□□□ -0.01
VCPKMT-201ENST00000395859 M0QZQ0 153 aa14.97□□□□□ -0.01
VCPKMT-201ENST00000395859 OR4Q2P0C623 313 aa14.97□□□□□ -0.01
VCPKMT-201ENST00000395859 HNRNPLP14866 589 aaKnown RBP eCLIP14.97□□□□□ -0.01
VCPKMT-201ENST00000395859 GCFC2P16383 781 aaKnown RBP14.97□□□□□ -0.01
VCPKMT-201ENST00000395859 HOXD12P35452 270 aa14.97□□□□□ -0.01
VCPKMT-201ENST00000395859 CYP4F8P98187 520 aa14.97□□□□□ -0.01
VCPKMT-201ENST00000395859 AKAP17AQ02040 695 aaKnown RBP14.97□□□□□ -0.01
VCPKMT-201ENST00000395859 SPDYCQ5MJ68 293 aa14.97□□□□□ -0.01
VCPKMT-201ENST00000395859 CMTM8Q8IZV2 173 aa14.97□□□□□ -0.01
VCPKMT-201ENST00000395859 TTC9BQ8N6N2 239 aa14.97□□□□□ -0.01
VCPKMT-201ENST00000395859 TBC1D32Q96NH3 1257 aa14.97□□□□□ -0.01
VCPKMT-201ENST00000395859 PGLYRP2Q96PD5 576 aa14.97□□□□□ -0.01
VCPKMT-201ENST00000395859 AGXT2Q9BYV1 514 aa14.97□□□□□ -0.01
VCPKMT-201ENST00000395859 PTPRHQ9HD43 1115 aa14.97□□□□□ -0.01
VCPKMT-201ENST00000395859 FSCN3Q9NQT6 498 aa14.97□□□□□ -0.01
VCPKMT-201ENST00000395859 RAI2Q9Y5P3 530 aa14.97□□□□□ -0.01
VCPKMT-201ENST00000395859 MTMR11A4FU01 709 aa14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 ANTXRLA6NF34 631 aa14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 USO1O60763 962 aaKnown RBP14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 FTH1P19P0C7X4 201 aa14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 XRCC6P12956 609 aaKnown RBP eCLIP14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 GRM5P41594 1212 aa14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 AMPD2Q01433 879 aa14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 TRIP6Q15654 476 aaKnown RBP14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 ARHGAP15Q53QZ3 475 aa14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 GALNT17Q6IS24 598 aa14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 ANO7Q6IWH7 933 aa14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 KRT25Q7Z3Z0 450 aa14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 TMEM150AQ86TG1 271 aa14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 LURAP1LQ8IV03 231 aa14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 FAM177A1Q8N128 213 aaPredicted RBP14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 FRMD1Q8N878 549 aa14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 PIGOQ8TEQ8 1089 aa14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 USP33Q8TEY7 942 aa14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 SLC39A7Q92504 469 aa14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 USP13Q92995 863 aaPredicted RBP14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 C18orf25Q96B23 403 aaPredicted RBP14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 OXCT2Q9BYC2 517 aaPredicted RBP14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 DNAAF2Q9NVR5 837 aaKnown RBP14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 CNTN3Q9P232 1028 aa14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 HSFX1Q9UBD0 423 aa14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 NUB1Q9Y5A7 615 aa14.96□□□□□ -0.01
VCPKMT-201ENST00000395859 PTPN13Q12923 2485 aa14.95□□□□□ -0.02
VCPKMT-201ENST00000395859 A0A087WWV3 80 aa14.95□□□□□ -0.02
VCPKMT-201ENST00000395859 ATXN7O15265 892 aaPredicted RBP14.95□□□□□ -0.02
VCPKMT-201ENST00000395859 SOAT2O75908 522 aa14.95□□□□□ -0.02
VCPKMT-201ENST00000395859 ALDH1A3P47895 512 aa14.95□□□□□ -0.02
VCPKMT-201ENST00000395859 AARSP49588 968 aaKnown RBP eCLIP14.95□□□□□ -0.02
VCPKMT-201ENST00000395859 MAP7D1Q3KQU3 841 aa14.95□□□□□ -0.02
VCPKMT-201ENST00000395859 ATF7IP2Q5U623 682 aa14.95□□□□□ -0.02
VCPKMT-201ENST00000395859 RNF20Q5VTR2 975 aa14.95□□□□□ -0.02
VCPKMT-201ENST00000395859 LPCAT2Q7L5N7 544 aa14.95□□□□□ -0.02
VCPKMT-201ENST00000395859 NEK8Q86SG6 692 aa14.95□□□□□ -0.02
VCPKMT-201ENST00000395859 SCUBE3Q8IX30 993 aa14.95□□□□□ -0.02
VCPKMT-201ENST00000395859 HDDC3Q8N4P3 179 aa14.95□□□□□ -0.02
VCPKMT-201ENST00000395859 PNPLA1Q8N8W4 532 aa14.95□□□□□ -0.02
VCPKMT-201ENST00000395859 ATAD1Q8NBU5 361 aa14.95□□□□□ -0.02
VCPKMT-201ENST00000395859 MCPH1Q8NEM0 835 aa14.95□□□□□ -0.02
VCPKMT-201ENST00000395859 BRF1Q92994 677 aa14.95□□□□□ -0.02
VCPKMT-201ENST00000395859 CD101Q93033 1021 aa14.95□□□□□ -0.02
VCPKMT-201ENST00000395859 CAMK1GQ96NX5 476 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms