RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 MKRN3Q13064 507 aaKnown RBP14.8□□□□□ -0.04
SNCA-204ENST00000394989 LAMC2Q13753 1193 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 ATP13A4Q4VNC1 1196 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 KATNAL2Q8IYT4 538 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 AFG1LQ8WV93 481 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 C16orf70Q9BSU1 422 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 DCLK3Q9C098 648 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 PNMA3Q9UL41 463 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 LSM8O95777 96 aaKnown RBP14.79□□□□□ -0.04
SNCA-204ENST00000394989 VTNP04004 478 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 IVDP26440 423 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 ADCY2Q08462 1091 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 TMEM132AQ24JP5 1023 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 ZNF484Q5JVG2 852 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 PPP1R15BQ5SWA1 713 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 KIRREL3Q8IZU9 778 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 PPTC7Q8NI37 304 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 FAM118BQ9BPY3 351 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 NXF1Q9UBU9 619 aaKnown RBP14.79□□□□□ -0.04
SNCA-204ENST00000394989 BTBD19C9JJ37 291 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 CDH5P33151 784 aaPredicted RBP14.79□□□□□ -0.04
SNCA-204ENST00000394989 PPP1R7Q15435 360 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 RUFY4Q6ZNE9 571 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 CCDC50Q8IVM0 306 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 ANKRD36BP1Q96IX9 119 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 CPB2Q96IY4 423 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 MCEEQ96PE7 176 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 SDCBP2Q9H190 292 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 PDZD7Q9H5P4 517 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 PRMT7Q9NVM4 692 aaPredicted RBP14.79□□□□□ -0.04
SNCA-204ENST00000394989 KLHL11Q9NVR0 708 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 PCDHGC3Q9UN70 934 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 RBM47A0AV96 593 aaKnown RBP14.79□□□□□ -0.04
SNCA-204ENST00000394989 GLTPD2A6NH11 291 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 LACTBL1A8MY62 500 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 SNAI1O95863 264 aaPredicted RBP14.79□□□□□ -0.04
SNCA-204ENST00000394989 TNNC2P02585 160 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 GBP1P32455 592 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 MAN1A1P33908 653 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 CDH8P55286 799 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 ACTN3Q08043 901 aaPredicted RBP14.79□□□□□ -0.04
SNCA-204ENST00000394989 SLC29A2Q14542 456 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 FAM187BQ17R55 369 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 KRT71Q3SY84 523 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 BCO2Q9BYV7 579 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 ZNF408Q9H9D4 720 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 RPF1Q9H9Y2 349 aaKnown RBP14.79□□□□□ -0.04
SNCA-204ENST00000394989 AAASQ9NRG9 546 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 PARP2Q9UGN5 583 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 SLC12A6Q9UHW9 1150 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 CYTH4Q9UIA0 394 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 NEU2Q9Y3R4 380 aa14.79□□□□□ -0.04
SNCA-204ENST00000394989 SCN4AP35499 1836 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 F8VP50 259 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 GH1P01241 217 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 STAG3L1P0CL83 205 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 FGFR4P22455 802 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 LSP1P33241 339 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 GJC1P36383 396 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 JADE1Q6IE81 842 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 PPP1R2P3Q6NXS1 205 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 EMID1Q96A84 441 aaPredicted RBP14.78□□□□□ -0.04
SNCA-204ENST00000394989 VTA1Q9NP79 307 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.78□□□□□ -0.04
SNCA-204ENST00000394989 BCCIPQ9P287 314 aaKnown RBP eCLIP14.78□□□□□ -0.04
SNCA-204ENST00000394989 TJP2Q9UDY2 1190 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 CAND2O75155 1236 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 KRT19P08727 400 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 EIF4BP23588 611 aaKnown RBP14.78□□□□□ -0.04
SNCA-204ENST00000394989 MDH1P40925 334 aaKnown RBP14.78□□□□□ -0.04
SNCA-204ENST00000394989 PHKA2P46019 1235 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 POU5F1BQ06416 359 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 ORC1Q13415 861 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 WDR72Q3MJ13 1102 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 CYP4A22Q5TCH4 519 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 AGBL2Q5U5Z8 902 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 TXNRD3NBQ6F5E7 133 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 IFNLR1Q8IU57 520 aaPredicted RBP14.78□□□□□ -0.04
SNCA-204ENST00000394989 TMEM35BQ8NCS4 154 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 EXD1Q8NHP7 514 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 OSBPL8Q9BZF1 889 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 HMGXB4Q9UGU5 601 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 IP6K2Q9UHH9 426 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 SUFUQ9UMX1 484 aa14.78□□□□□ -0.04
SNCA-204ENST00000394989 NOVA2Q9UNW9 492 aaKnown RBP14.78□□□□□ -0.04
SNCA-204ENST00000394989 IL18RAPO95256 599 aa14.77□□□□□ -0.04
SNCA-204ENST00000394989 CALB1P05937 261 aa14.77□□□□□ -0.04
SNCA-204ENST00000394989 ARF4P18085 180 aaPredicted RBP14.77□□□□□ -0.04
SNCA-204ENST00000394989 EIF3BP55884 814 aaKnown RBP14.77□□□□□ -0.04
SNCA-204ENST00000394989 DENND1BQ6P3S1 775 aa14.77□□□□□ -0.04
SNCA-204ENST00000394989 RHBDF2Q6PJF5 856 aa14.77□□□□□ -0.04
SNCA-204ENST00000394989 CEP57Q86XR8 500 aa14.77□□□□□ -0.04
SNCA-204ENST00000394989 OTUD6BQ8N6M0 293 aa14.77□□□□□ -0.04
SNCA-204ENST00000394989 BRI3BPQ8WY22 251 aa14.77□□□□□ -0.04
SNCA-204ENST00000394989 ZNF518BQ9C0D4 1074 aa14.77□□□□□ -0.04
SNCA-204ENST00000394989 AKT3Q9Y243 479 aa14.77□□□□□ -0.04
SNCA-204ENST00000394989 TMOD1P28289 359 aa14.77□□□□□ -0.05
SNCA-204ENST00000394989 CCNA1P78396 465 aa14.77□□□□□ -0.05
SNCA-204ENST00000394989 TRIP13Q15645 432 aaPredicted RBP14.77□□□□□ -0.05
SNCA-204ENST00000394989 MARCH8Q5T0T0 291 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms