RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 PDIK1LQ8N165 341 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 C4orf33Q8N1A6 199 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 MREGQ8N565 214 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 OR5B17Q8NGF7 314 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 ZNF606Q8WXB4 792 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 TGS1Q96RS0 853 aaKnown RBP11.11□□□□□ -0.63
CALD1-203ENST00000393118 NIF3L1Q9GZT8 377 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 MIS12Q9H081 205 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 ZCWPW1Q9H0M4 648 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 FGFR1OP2Q9NVK5 253 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 SCN7AQ01118 1682 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.11□□□□□ -0.63
CALD1-203ENST00000393118 PROSCO94903 275 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 MAP3K6O95382 1288 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 INHBAP08476 426 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 RARGP13631 454 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 MSH2P43246 934 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 CUL3Q13618 768 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 ATF7IP2Q5U623 682 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 TDRD10Q5VZ19 366 aaKnown RBP11.11□□□□□ -0.63
CALD1-203ENST00000393118 TRMT10CQ7L0Y3 403 aaKnown RBP11.11□□□□□ -0.63
CALD1-203ENST00000393118 LRRC34Q8IZ02 419 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 EMC1Q8N766 993 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 CHST13Q8NET6 341 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 OR6B3Q8NGW1 331 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 PLEKHO2Q8TD55 490 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 C7orf43Q8WVR3 580 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 PRM3Q9NNZ6 103 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 PAPOLBQ9NRJ5 636 aaKnown RBP11.11□□□□□ -0.63
CALD1-203ENST00000393118 CHCHD3Q9NX63 227 aaKnown RBP11.11□□□□□ -0.63
CALD1-203ENST00000393118 AGAP1Q9UPQ3 857 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 NEU2Q9Y3R4 380 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 CNTNAP1P78357 1384 aa11.11□□□□□ -0.63
CALD1-203ENST00000393118 FSBPO95073 299 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 GLRA2P23416 452 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 PHKA2P46019 1235 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 TTLL4Q14679 1199 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 ZBTB41Q5SVQ8 909 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 PPP1R2P3Q6NXS1 205 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 ZNF572Q7Z3I7 529 aaPredicted RBP11.1□□□□□ -0.63
CALD1-203ENST00000393118 ZNF677Q86XU0 584 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 RNF169Q8NCN4 708 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 UBA3Q8TBC4 463 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 C2orf40Q9H1Z8 148 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 CISHQ9NSE2 258 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 SEPT10Q9P0V9 454 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 TTLL3Q9Y4R7 772 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 UPP2O95045 317 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 CAV1Q03135 178 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 DUPD1Q68J44 220 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.1□□□□□ -0.63
CALD1-203ENST00000393118 MAP7D3Q8IWC1 876 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 ABRAQ8N0Z2 381 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 RASGEF1CQ8N431 466 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 TRPM4Q8TD43 1214 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 CNKSR2Q8WXI2 1034 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 CFAP36Q96G28 342 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 SH3GL2Q99962 352 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 ALG13Q9NP73 1137 aaKnown RBP11.1□□□□□ -0.63
CALD1-203ENST00000393118 CST8O60676 142 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 LGR5O75473 907 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 TOM1L1O75674 476 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 GJB1P08034 283 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 RFC5P40937 340 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 CDH6P55285 790 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 MXD4Q14582 209 aaPredicted RBP11.1□□□□□ -0.63
CALD1-203ENST00000393118 C1orf228Q6PIY5 440 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 FUKQ8N0W3 1084 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 KIF2BQ8N4N8 673 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 CCHCR1Q8TD31 782 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 HELQQ8TDG4 1101 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 STMN2Q93045 179 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 SLC10A4Q96EP9 437 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 STRIP2Q9ULQ0 834 aa11.1□□□□□ -0.63
CALD1-203ENST00000393118 MAGED2Q9UNF1 606 aaPredicted RBP11.1□□□□□ -0.63
CALD1-203ENST00000393118 RIPK2O43353 540 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 DDNO94850 711 aaPredicted RBP11.09□□□□□ -0.63
CALD1-203ENST00000393118 TNFSF9P41273 254 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 MAGEA4P43358 317 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 CDH8P55286 799 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 TGFB2P61812 414 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 NFIL3Q16649 462 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 ZNF449Q6P9G9 518 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 CATSPER4Q7RTX7 472 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 SLFN11Q7Z7L1 901 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 ZC3H3Q8IXZ2 948 aaKnown RBP11.09□□□□□ -0.63
CALD1-203ENST00000393118 GMLQ99445 158 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 CGRRF1Q99675 332 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 TMEM165Q9HC07 324 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 OGTO15294 1046 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 ZC3H11AO75152 810 aaKnown RBP eCLIP11.09□□□□□ -0.63
CALD1-203ENST00000393118 LYPLA2O95372 231 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 UBA1P22314 1058 aaKnown RBP11.09□□□□□ -0.63
CALD1-203ENST00000393118 PAPOLAP51003 745 aaKnown RBP11.09□□□□□ -0.63
CALD1-203ENST00000393118 DCAF12L1Q5VU92 463 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 IER5Q5VY09 327 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 RCOR2Q8IZ40 523 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 TEKT4Q8WW24 435 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 BORCS6Q96GS4 357 aa11.09□□□□□ -0.63
CALD1-203ENST00000393118 KLF6Q99612 283 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms