RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 RNPC3Q96LT9 517 aaKnown RBP18.77■□□□□ 0.6
SHTN1-203ENST00000392901 CARD9Q9H257 536 aa18.77■□□□□ 0.6
SHTN1-203ENST00000392901 CREBZFQ9NS37 354 aa18.77■□□□□ 0.6
SHTN1-203ENST00000392901 SRRDQ9UH36 339 aa18.77■□□□□ 0.6
SHTN1-203ENST00000392901 DERAQ9Y315 318 aa18.77■□□□□ 0.6
SHTN1-203ENST00000392901 H3BQF6 201 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 MYO1FO00160 1098 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 KRIT1O00522 736 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 RAD51CO43502 376 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 CILPO75339 1184 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 HEXIM1O94992 359 aaKnown RBP18.76■□□□□ 0.59
SHTN1-203ENST00000392901 NFX1Q12986 1120 aaKnown RBP18.76■□□□□ 0.59
SHTN1-203ENST00000392901 ZBTB6Q15916 424 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 ALKAL1Q6UXT8 129 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 RSPH3Q86UC2 560 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 WDTC1Q8N5D0 677 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 SLC4A11Q8NBS3 891 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 BEST2Q8NFU1 509 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 ELOVL4Q9GZR5 314 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 WNT8AQ9H1J5 351 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 CYP3A43Q9HB55 503 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 CNTN3Q9P232 1028 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 SCN10AQ9Y5Y9 1956 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 ESYT3A0FGR9 886 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 GJB6O95452 261 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 MMP8P22894 467 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 C1QBPQ07021 282 aaKnown RBP18.76■□□□□ 0.59
SHTN1-203ENST00000392901 MAMLD1Q13495 774 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 DPH6Q7L8W6 267 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 ADAT2Q7Z6V5 191 aaKnown RBP18.76■□□□□ 0.59
SHTN1-203ENST00000392901 RUBCNQ92622 972 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 CD101Q93033 1021 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 TMEM176AQ96HP8 235 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 EPB41L5Q9HCM4 733 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 MRPL47Q9HD33 250 aaKnown RBP18.76■□□□□ 0.59
SHTN1-203ENST00000392901 PCDHGC3Q9UN70 934 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 NR2E1Q9Y466 385 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 IPPQ9Y573 584 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 CEP83Q9Y592 693 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 SNX9Q9Y5X1 595 aa18.76■□□□□ 0.59
SHTN1-203ENST00000392901 LSM8O95777 96 aaKnown RBP18.75■□□□□ 0.59
SHTN1-203ENST00000392901 PAEPP09466 180 aa18.75■□□□□ 0.59
SHTN1-203ENST00000392901 OAS2P29728 719 aaKnown RBP18.75■□□□□ 0.59
SHTN1-203ENST00000392901 PEX5P50542 639 aa18.75■□□□□ 0.59
SHTN1-203ENST00000392901 NKX3-2P78367 333 aa18.75■□□□□ 0.59
SHTN1-203ENST00000392901 GUCY2DQ02846 1103 aa18.75■□□□□ 0.59
SHTN1-203ENST00000392901 PTPN11Q06124 597 aaPredicted RBP18.75■□□□□ 0.59
SHTN1-203ENST00000392901 TRADDQ15628 312 aa18.75■□□□□ 0.59
SHTN1-203ENST00000392901 PPP1R2P3Q6NXS1 205 aa18.75■□□□□ 0.59
SHTN1-203ENST00000392901 DENND1BQ6P3S1 775 aa18.75■□□□□ 0.59
SHTN1-203ENST00000392901 DDX47Q9H0S4 455 aaKnown RBP18.75■□□□□ 0.59
SHTN1-203ENST00000392901 GDF3Q9NR23 364 aa18.75■□□□□ 0.59
SHTN1-203ENST00000392901 TRPV2Q9Y5S1 764 aa18.75■□□□□ 0.59
SHTN1-203ENST00000392901 CEP350Q5VT06 3117 aa18.75■□□□□ 0.59
SHTN1-203ENST00000392901 SMIM28A0A1B0GU29 152 aa18.75■□□□□ 0.59
SHTN1-203ENST00000392901 TLR3O15455 904 aaKnown RBP18.75■□□□□ 0.59
SHTN1-203ENST00000392901 MED7O43513 233 aa18.75■□□□□ 0.59
SHTN1-203ENST00000392901 RPS6KA5O75582 802 aa18.75■□□□□ 0.59
SHTN1-203ENST00000392901 HOXD10P28358 340 aa18.75■□□□□ 0.59
SHTN1-203ENST00000392901 NDST1P52848 882 aa18.75■□□□□ 0.59
SHTN1-203ENST00000392901 PLEKHA7Q6IQ23 1121 aa18.75■□□□□ 0.59
SHTN1-203ENST00000392901 SESTD1Q86VW0 696 aa18.75■□□□□ 0.59
SHTN1-203ENST00000392901 KLHDC9Q8NEP7 349 aa18.75■□□□□ 0.59
SHTN1-203ENST00000392901 HEXIM2Q96MH2 286 aaKnown RBP18.75■□□□□ 0.59
SHTN1-203ENST00000392901 POLR3GO15318 223 aaPredicted RBP18.74■□□□□ 0.59
SHTN1-203ENST00000392901 STAU1O95793 577 aaKnown RBP18.74■□□□□ 0.59
SHTN1-203ENST00000392901 CHRNA1P02708 482 aa18.74■□□□□ 0.59
SHTN1-203ENST00000392901 CARSP49589 748 aaKnown RBP18.74■□□□□ 0.59
SHTN1-203ENST00000392901 GABPB1Q06547 395 aaPredicted RBP18.74■□□□□ 0.59
SHTN1-203ENST00000392901 SERINC5Q86VE9 423 aa18.74■□□□□ 0.59
SHTN1-203ENST00000392901 ERICH1Q86X53 443 aa18.74■□□□□ 0.59
SHTN1-203ENST00000392901 SMG8Q8ND04 991 aaKnown RBP18.74■□□□□ 0.59
SHTN1-203ENST00000392901 RAET1EQ8TD07 263 aa18.74■□□□□ 0.59
SHTN1-203ENST00000392901 ZNF518BQ9C0D4 1074 aa18.74■□□□□ 0.59
SHTN1-203ENST00000392901 PARVAQ9NVD7 372 aa18.74■□□□□ 0.59
SHTN1-203ENST00000392901 TTC7AQ9ULT0 858 aaPredicted RBP18.74■□□□□ 0.59
SHTN1-203ENST00000392901 BARX2Q9UMQ3 279 aaPredicted RBP18.74■□□□□ 0.59
SHTN1-203ENST00000392901 UBQLN1Q9UMX0 589 aaKnown RBP18.74■□□□□ 0.59
SHTN1-203ENST00000392901 ST3GAL5Q9UNP4 418 aa18.74■□□□□ 0.59
SHTN1-203ENST00000392901 SCINQ9Y6U3 715 aa18.74■□□□□ 0.59
SHTN1-203ENST00000392901 CCDC66A2RUB6 948 aa18.74■□□□□ 0.59
SHTN1-203ENST00000392901 SART1O43290 800 aaKnown RBP18.74■□□□□ 0.59
SHTN1-203ENST00000392901 HMGCRP04035 888 aa18.74■□□□□ 0.59
SHTN1-203ENST00000392901 CTNNA1P35221 906 aaKnown RBP18.74■□□□□ 0.59
SHTN1-203ENST00000392901 DAB2IPQ5VWQ8 1189 aa18.74■□□□□ 0.59
SHTN1-203ENST00000392901 CCSAPQ6IQ19 270 aaPredicted RBP18.74■□□□□ 0.59
SHTN1-203ENST00000392901 ARRDC4Q8NCT1 418 aa18.74■□□□□ 0.59
SHTN1-203ENST00000392901 HPCAL4Q9UM19 191 aa18.74■□□□□ 0.59
SHTN1-203ENST00000392901 PCDHA3Q9Y5H8 950 aa18.74■□□□□ 0.59
SHTN1-203ENST00000392901 GRIN2DO15399 1336 aa18.73■□□□□ 0.59
SHTN1-203ENST00000392901 A0A0U1RQG5 324 aaPredicted RBP18.73■□□□□ 0.59
SHTN1-203ENST00000392901 CALB1P05937 261 aa18.73■□□□□ 0.59
SHTN1-203ENST00000392901 PYGMP11217 842 aa18.73■□□□□ 0.59
SHTN1-203ENST00000392901 TNFRSF8P28908 595 aa18.73■□□□□ 0.59
SHTN1-203ENST00000392901 CDH5P33151 784 aaPredicted RBP18.73■□□□□ 0.59
SHTN1-203ENST00000392901 THPOP40225 353 aa18.73■□□□□ 0.59
SHTN1-203ENST00000392901 APLP1P51693 650 aa18.73■□□□□ 0.59
SHTN1-203ENST00000392901 PTGISQ16647 500 aa18.73■□□□□ 0.59
SHTN1-203ENST00000392901 CYP4A22Q5TCH4 519 aa18.73■□□□□ 0.59
SHTN1-203ENST00000392901 C9orf57Q5W0N0 161 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms