RNA–Protein interactions for RNA: ENST00000390423.2

TRAV1-2-201, Transcript of T cell receptor alpha variable 1-2, humanhuman

APPRIS P1 BASIC

Gene TRAV1-2, Length 402 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2-201ENST00000390423 PCDH15Q96QU1 1955 aa6.89□□□□□ -1.31
TRAV1-2-201ENST00000390423 PTPRBP23467 1997 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 PTPRDP23468 1912 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 UPK3BL1B0FP48 263 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 UPK3BL2E5RIL1 263 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 WNT7AO00755 349 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 TRDMT1O14717 391 aaKnown RBP6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 ASAP2O43150 1006 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 DKC1O60832 514 aaKnown RBP eCLIP6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 SOAT2O75908 522 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 BAG4O95429 457 aaKnown RBP6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 OR4Q2P0C623 313 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 FTH1P19P0C7X4 201 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 CD59P13987 128 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 ATP2B1P20020 1258 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 MCM2P49736 904 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 CYP4F8P98187 520 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 LMAN2Q12907 356 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 PCBP1Q15365 356 aaKnown RBP eCLIP6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 CALCRLQ16602 461 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 XKR9Q5GH70 373 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 GPR158Q5T848 1215 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 EEF1DP3Q658K8 133 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 ANO7Q6IWH7 933 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 HAUS6Q7Z4H7 955 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 ZNF605Q86T29 641 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 TMEFF1Q8IYR6 380 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 ELMOD1Q8N336 334 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 TTC9BQ8N6N2 239 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 LEMD2Q8NC56 503 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 FBXO18Q8NFZ0 1043 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 BPIFB1Q8TDL5 484 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 RLN3Q8WXF3 142 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 ADAMTS14Q8WXS8 1223 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 TMX3Q96JJ7 454 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 PGLYRP2Q96PD5 576 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 FNBP1Q96RU3 617 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 LXNQ9BS40 222 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 EBF3Q9H4W6 596 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 GKN1Q9NS71 199 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 KIF3AQ9Y496 699 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 GTF3C3Q9Y5Q9 886 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 URB1O60287 2271 aaKnown RBP6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 TRIP11Q15643 1979 aa6.88□□□□□ -1.31
TRAV1-2-201ENST00000390423 A0A087WWV3 80 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 DPYSL4O14531 572 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 ATXN7O15265 892 aaPredicted RBP6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 SH3BP5O60239 455 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 CFIP05156 583 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 P4HBP07237 508 aaKnown RBP6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 HNRNPLP14866 589 aaKnown RBP eCLIP6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 ITPKAP23677 461 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 ITPKBP27987 946 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 MCM7P33993 719 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 ARL2P36404 184 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 GALK1P51570 392 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 CDR1P51861 262 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 CYP4A11Q02928 519 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 TFDP1Q14186 410 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 MRPL58Q14197 206 aaKnown RBP6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 CTTNQ14247 550 aaKnown RBP6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 MXD4Q14582 209 aaPredicted RBP6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 EPHA7Q15375 998 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 TRIP6Q15654 476 aaKnown RBP6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 CTXN3Q4LDR2 81 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 USP39Q53GS9 565 aaKnown RBP6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 TTC38Q5R3I4 469 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 TPGS2Q68CL5 300 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 SLCO6A1Q86UG4 719 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 RASSF3Q86WH2 238 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 MDGA1Q8NFP4 955 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 TSTD1Q8NFU3 115 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 PIP4K2CQ8TBX8 421 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 DYDC2Q96IM9 177 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 FAM83CQ9BQN1 747 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 NUSAP1Q9BXS6 441 aaKnown RBP6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 BACH2Q9BYV9 841 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 GPR88Q9GZN0 384 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 POLR3FQ9H1D9 316 aaPredicted RBP6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 FOXP1Q9H334 677 aaPredicted RBP6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 GPRC5CQ9NQ84 441 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 AFF4Q9UHB7 1163 aaKnown RBP6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 CIZ1Q9ULV3 898 aaPredicted RBP6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 NOL7Q9UMY1 257 aaKnown RBP6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 CCL26Q9Y258 94 aa6.87□□□□□ -1.31
TRAV1-2-201ENST00000390423 PI4KAP42356 2102 aa6.86□□□□□ -1.31
TRAV1-2-201ENST00000390423 A0A087WV48 116 aa6.86□□□□□ -1.31
TRAV1-2-201ENST00000390423 LRRIQ4A6NIV6 560 aa6.86□□□□□ -1.31
TRAV1-2-201ENST00000390423 J3QKU1 62 aa6.86□□□□□ -1.31
TRAV1-2-201ENST00000390423 ARHGAP6O43182 974 aa6.86□□□□□ -1.31
TRAV1-2-201ENST00000390423 TRAPPC3O43617 180 aa6.86□□□□□ -1.31
TRAV1-2-201ENST00000390423 OR52Z1P0C646 297 aa6.86□□□□□ -1.31
TRAV1-2-201ENST00000390423 CPB1P15086 417 aa6.86□□□□□ -1.31
TRAV1-2-201ENST00000390423 GJB2P29033 226 aa6.86□□□□□ -1.31
TRAV1-2-201ENST00000390423 RDXP35241 583 aaKnown RBP6.86□□□□□ -1.31
TRAV1-2-201ENST00000390423 TXKP42681 527 aa6.86□□□□□ -1.31
TRAV1-2-201ENST00000390423 SEC13P55735 322 aa6.86□□□□□ -1.31
TRAV1-2-201ENST00000390423 PLCB2Q00722 1185 aa6.86□□□□□ -1.31
TRAV1-2-201ENST00000390423 POU5F1BQ06416 359 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms