RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 RNF40O75150 1001 aa12.88□□□□□ -0.35
SOD1-202ENST00000389995 EGFP01133 1207 aa12.88□□□□□ -0.35
SOD1-202ENST00000389995 MARCKSP29966 332 aaPredicted RBP12.88□□□□□ -0.35
SOD1-202ENST00000389995 RPL9P32969 192 aaKnown RBP12.88□□□□□ -0.35
SOD1-202ENST00000389995 PEX3P56589 373 aa12.88□□□□□ -0.35
SOD1-202ENST00000389995 YWHAHQ04917 246 aaPredicted RBP12.88□□□□□ -0.35
SOD1-202ENST00000389995 ITPRIPL2Q3MIP1 535 aa12.88□□□□□ -0.35
SOD1-202ENST00000389995 KIAA1211LQ6NV74 962 aa12.88□□□□□ -0.35
SOD1-202ENST00000389995 HAUS6Q7Z4H7 955 aa12.88□□□□□ -0.35
SOD1-202ENST00000389995 DNAJB7Q7Z6W7 309 aaPredicted RBP12.88□□□□□ -0.35
SOD1-202ENST00000389995 SYNPOQ8N3V7 929 aa12.88□□□□□ -0.35
SOD1-202ENST00000389995 BEST2Q8NFU1 509 aa12.88□□□□□ -0.35
SOD1-202ENST00000389995 BPIFB1Q8TDL5 484 aa12.88□□□□□ -0.35
SOD1-202ENST00000389995 ZC3H10Q96K80 434 aaKnown RBP12.88□□□□□ -0.35
SOD1-202ENST00000389995 LPIN3Q9BQK8 851 aa12.88□□□□□ -0.35
SOD1-202ENST00000389995 TCHPQ9BT92 498 aa12.88□□□□□ -0.35
SOD1-202ENST00000389995 POLR3CQ9BUI4 534 aaPredicted RBP12.88□□□□□ -0.35
SOD1-202ENST00000389995 SCNM1Q9BWG6 230 aa12.88□□□□□ -0.35
SOD1-202ENST00000389995 BHMT2Q9H2M3 363 aa12.88□□□□□ -0.35
SOD1-202ENST00000389995 GKN1Q9NS71 199 aa12.88□□□□□ -0.35
SOD1-202ENST00000389995 CNTN3Q9P232 1028 aa12.88□□□□□ -0.35
SOD1-202ENST00000389995 PCDHGA5Q9Y5G8 931 aa12.88□□□□□ -0.35
SOD1-202ENST00000389995 LNP1A1A4G5 178 aa12.87□□□□□ -0.35
SOD1-202ENST00000389995 PATE3B3GLJ2 98 aa12.87□□□□□ -0.35
SOD1-202ENST00000389995 CAVIN2O95810 425 aa12.87□□□□□ -0.35
SOD1-202ENST00000389995 ALDH1A3P47895 512 aa12.87□□□□□ -0.35
SOD1-202ENST00000389995 NPTX2P47972 431 aa12.87□□□□□ -0.35
SOD1-202ENST00000389995 GUCY2FP51841 1108 aa12.87□□□□□ -0.35
SOD1-202ENST00000389995 RING1Q06587 406 aa12.87□□□□□ -0.35
SOD1-202ENST00000389995 SLC10A6Q3KNW5 377 aa12.87□□□□□ -0.35
SOD1-202ENST00000389995 CENPPQ6IPU0 288 aa12.87□□□□□ -0.35
SOD1-202ENST00000389995 APBB1IPQ7Z5R6 666 aaPredicted RBP12.87□□□□□ -0.35
SOD1-202ENST00000389995 DIS3L2Q8IYB7 885 aaKnown RBP12.87□□□□□ -0.35
SOD1-202ENST00000389995 NECAB1Q8N987 351 aa12.87□□□□□ -0.35
SOD1-202ENST00000389995 GATA6Q92908 595 aa12.87□□□□□ -0.35
SOD1-202ENST00000389995 EBF3Q9H4W6 596 aa12.87□□□□□ -0.35
SOD1-202ENST00000389995 HPS4Q9NQG7 708 aa12.87□□□□□ -0.35
SOD1-202ENST00000389995 CCL26Q9Y258 94 aa12.87□□□□□ -0.35
SOD1-202ENST00000389995 HELZP42694 1942 aaKnown RBP12.86□□□□□ -0.35
SOD1-202ENST00000389995 CCDC163A0A0D9SF12 145 aa12.86□□□□□ -0.35
SOD1-202ENST00000389995 MTMR11A4FU01 709 aa12.86□□□□□ -0.35
SOD1-202ENST00000389995 M0QZQ0 153 aa12.86□□□□□ -0.35
SOD1-202ENST00000389995 PFKFB2O60825 505 aa12.86□□□□□ -0.35
SOD1-202ENST00000389995 REC8O95072 547 aa12.86□□□□□ -0.35
SOD1-202ENST00000389995 OAZ2O95190 189 aa12.86□□□□□ -0.35
SOD1-202ENST00000389995 ARSAP15289 507 aa12.86□□□□□ -0.35
SOD1-202ENST00000389995 RPA1P27694 616 aa12.86□□□□□ -0.35
SOD1-202ENST00000389995 GPR17Q13304 367 aa12.86□□□□□ -0.35
SOD1-202ENST00000389995 PLD1Q13393 1074 aa12.86□□□□□ -0.35
SOD1-202ENST00000389995 TMEM196Q5HYL7 178 aa12.86□□□□□ -0.35
SOD1-202ENST00000389995 LRSAM1Q6UWE0 723 aa12.86□□□□□ -0.35
SOD1-202ENST00000389995 ZCCHC14Q8WYQ9 949 aaKnown RBP12.86□□□□□ -0.35
SOD1-202ENST00000389995 KIFAP3Q92845 792 aa12.86□□□□□ -0.35
SOD1-202ENST00000389995 PSMG2Q969U7 264 aa12.86□□□□□ -0.35
SOD1-202ENST00000389995 SLC46A2Q9BY10 475 aa12.86□□□□□ -0.35
SOD1-202ENST00000389995 MRPL4Q9BYD3 311 aaKnown RBP12.86□□□□□ -0.35
SOD1-202ENST00000389995 BRMS1Q9HCU9 246 aa12.86□□□□□ -0.35
SOD1-202ENST00000389995 ANKFY1Q9P2R3 1169 aa12.86□□□□□ -0.35
SOD1-202ENST00000389995 MAFFQ9ULX9 164 aa12.86□□□□□ -0.35
SOD1-202ENST00000389995 LHX6Q9UPM6 363 aa12.86□□□□□ -0.35
SOD1-202ENST00000389995 PHLPP2Q6ZVD8 1323 aa12.86□□□□□ -0.35
SOD1-202ENST00000389995 BCLAF3A2AJT9 711 aaKnown RBP12.85□□□□□ -0.35
SOD1-202ENST00000389995 ANTXRLA6NF34 631 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 PPEF2O14830 753 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 LARGE1O95461 756 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 CXCL8P10145 99 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 MCF2P10911 925 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 PROZP22891 400 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 GBP1P32455 592 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 MCM2P49736 904 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 GALK1P51570 392 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 GRSF1Q12849 480 aaKnown RBP eCLIP12.85□□□□□ -0.35
SOD1-202ENST00000389995 RUNX3Q13761 415 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 ZNF174Q15697 407 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 UAP1L1Q3KQV9 507 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 ARHGAP15Q53QZ3 475 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 MPZL3Q6UWV2 235 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 DSTYKQ6XUX3 929 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 DAW1Q8N136 415 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 STKLD1Q8NE28 680 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 DEFB124Q8NES8 71 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 RPLP0P6Q8NHW5 317 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 RIN3Q8TB24 985 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 GIPC2Q8TF65 315 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 SEPT5Q99719 369 aaPredicted RBP12.85□□□□□ -0.35
SOD1-202ENST00000389995 FAM83CQ9BQN1 747 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 TM6SF1Q9BZW5 370 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 TASP1Q9H6P5 420 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 IL21Q9HBE4 155 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 KIAA1024Q9UPX6 916 aa12.85□□□□□ -0.35
SOD1-202ENST00000389995 SFI1A8K8P3 1242 aa12.84□□□□□ -0.35
SOD1-202ENST00000389995 CDX4O14627 284 aaPredicted RBP12.84□□□□□ -0.35
SOD1-202ENST00000389995 TRDMT1O14717 391 aaKnown RBP12.84□□□□□ -0.35
SOD1-202ENST00000389995 SLC16A4O15374 487 aa12.84□□□□□ -0.35
SOD1-202ENST00000389995 HYAL3O43820 417 aaPredicted RBP12.84□□□□□ -0.35
SOD1-202ENST00000389995 JAK2O60674 1132 aa12.84□□□□□ -0.35
SOD1-202ENST00000389995 ATG13O75143 517 aa12.84□□□□□ -0.35
SOD1-202ENST00000389995 HIP1RO75146 1068 aa12.84□□□□□ -0.35
SOD1-202ENST00000389995 AKAP3O75969 853 aa12.84□□□□□ -0.35
SOD1-202ENST00000389995 ATF6P18850 670 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms