RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 DALRD3Q5D0E6 543 aaKnown RBP6.11□□□□□ -1.43
RFX3-204ENST00000382004 DHX40Q8IX18 779 aaKnown RBP6.11□□□□□ -1.43
RFX3-204ENST00000382004 CASP10Q92851 521 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 C18orf8Q96DM3 657 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 KLF6Q99612 283 aaPredicted RBP6.11□□□□□ -1.43
RFX3-204ENST00000382004 CPVLQ9H3G5 476 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 SLC39A10Q9ULF5 831 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 KLHL20Q9Y2M5 609 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 SPACA6W5XKT8 324 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 LOC102724428A0A0B4J2F2 783 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 NCF1BA6NI72 391 aaPredicted RBP6.11□□□□□ -1.43
RFX3-204ENST00000382004 NCF1CA8MVU1 366 aaPredicted RBP6.11□□□□□ -1.43
RFX3-204ENST00000382004 VWA5AO00534 786 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 DYRK3O43781 588 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 CPSF4O95639 269 aaKnown RBP6.11□□□□□ -1.43
RFX3-204ENST00000382004 ASNSP08243 561 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 NCF1P14598 390 aaPredicted RBP6.11□□□□□ -1.43
RFX3-204ENST00000382004 TFE3P19532 575 aaPredicted RBP6.11□□□□□ -1.43
RFX3-204ENST00000382004 SERPINB9P50453 376 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 SIK1P57059 783 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 LAMB3Q13751 1172 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 PI16Q6UXB8 463 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 TMEM179Q6ZVK1 233 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 LRRC49Q8IUZ0 686 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 TMC2Q8TDI7 906 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 SH3RF3Q8TEJ3 882 aaPredicted RBP6.11□□□□□ -1.43
RFX3-204ENST00000382004 NACC2Q96BF6 587 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 ARHGEF26Q96DR7 871 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 MCEEQ96PE7 176 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 WRNIP1Q96S55 665 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 FAM118BQ9BPY3 351 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 HPS5Q9UPZ3 1129 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 ZMYM4Q5VZL5 1548 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 PCNAP12004 261 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 IFNAR1P17181 557 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 QARSP47897 775 aaKnown RBP6.11□□□□□ -1.43
RFX3-204ENST00000382004 PUDPQ08623 228 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 RESTQ13127 1097 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 MGAT5BQ3V5L5 792 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 RDM1Q8NG50 284 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 PPP2R3CQ969Q6 453 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 RAD21L1Q9H4I0 556 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 TRIM39Q9HCM9 518 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 NMRK2Q9NPI5 230 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 KLHL1Q9NR64 748 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 ERAP1Q9NZ08 941 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 CRLS1Q9UJA2 301 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 FEM1BQ9UK73 627 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 MTO1Q9Y2Z2 717 aaKnown RBP6.11□□□□□ -1.43
RFX3-204ENST00000382004 NEU2Q9Y3R4 380 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 PRR29P0C7W0 189 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 PSMC3P17980 439 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 SPRP35270 261 aaPredicted RBP6.11□□□□□ -1.43
RFX3-204ENST00000382004 ANXA11P50995 505 aaKnown RBP6.11□□□□□ -1.43
RFX3-204ENST00000382004 CCNIQ14094 377 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 RCN1Q15293 331 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 CCDC144BQ3MJ40 725 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 UNC5CLQ8IV45 518 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 MDM1Q8TC05 714 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 SEC16BQ96JE7 1060 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 C9orf72Q96LT7 481 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 RBM15Q96T37 977 aaKnown RBP eCLIP6.11□□□□□ -1.43
RFX3-204ENST00000382004 AGPAT1Q99943 283 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 TRIM51Q9BSJ1 452 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 ARIH1Q9Y4X5 557 aaPredicted RBP6.11□□□□□ -1.43
RFX3-204ENST00000382004 SKAP2O75563 359 aaPredicted RBP6.11□□□□□ -1.43
RFX3-204ENST00000382004 CIAO1O76071 339 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 ATP6V1B2P21281 511 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 SERPINB5P36952 375 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 DSG1Q02413 1049 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 CLEC16AQ2KHT3 1053 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 ARMC4Q5T2S8 1044 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 C12orf60Q5U649 245 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 ZNF544Q6NX49 715 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 FAM196AQ6ZSG2 479 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 SIX5Q8N196 739 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 TTC39CQ8N584 583 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 LRRC39Q96DD0 335 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 CXorf56Q9H5V9 222 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 CTNNAL1Q9UBT7 734 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 RNF112Q9ULX5 631 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 EIF3LQ9Y262 564 aaKnown RBP6.11□□□□□ -1.43
RFX3-204ENST00000382004 COQ6Q9Y2Z9 468 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 AP4S1Q9Y587 144 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 IQCMA0A1B0GVH7 501 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 FAM47DPA6NHR8 397 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 CENPXA8MT69 81 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 ZNF682O95780 498 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 RBBP4Q09028 425 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 TRPM8Q7Z2W7 1104 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 CYP4Z1Q86W10 505 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 KRT73Q86Y46 540 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 MMGT1Q8N4V1 131 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 STKLD1Q8NE28 680 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 OR6J1Q8NGC5 347 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 RFFLQ8WZ73 363 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 SGF29Q96ES7 293 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 LXNQ9BS40 222 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 BATF3Q9NR55 127 aa6.1□□□□□ -1.43
RFX3-204ENST00000382004 TBC1D22BQ9NU19 505 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms