RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 PRR12Q9ULL5 1215 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 HEMK1Q9Y5R4 338 aaPredicted RBP6.92□□□□□ -1.3
RIPK1-202ENST00000380409 SMIM23A6NLE4 172 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 ATMINO43313 823 aaPredicted RBP6.92□□□□□ -1.3
RIPK1-202ENST00000380409 CCDC159P0C7I6 412 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 PPARGP37231 505 aaPredicted RBP6.92□□□□□ -1.3
RIPK1-202ENST00000380409 RFX5P48382 616 aaPredicted RBP6.92□□□□□ -1.3
RIPK1-202ENST00000380409 AQP4P55087 323 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 ATP6V0D1P61421 351 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 ASPHQ12797 758 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 DCAF12L1Q5VU92 463 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 LMBRD2Q68DH5 695 aaPredicted RBP6.92□□□□□ -1.3
RIPK1-202ENST00000380409 VPS36Q86VN1 386 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 C2CD5Q86YS7 1000 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 ZNF276Q8N554 614 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 LSMEM1Q8N8F7 131 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 ZBTB38Q8NAP3 1195 aaPredicted RBP6.92□□□□□ -1.3
RIPK1-202ENST00000380409 GIMAP8Q8ND71 665 aaPredicted RBP6.92□□□□□ -1.3
RIPK1-202ENST00000380409 LILRB4Q8NHJ6 448 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 SCFD1Q8WVM8 642 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 CAMKK2Q96RR4 588 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 GPATCH1Q9BRR8 931 aaKnown RBP6.92□□□□□ -1.3
RIPK1-202ENST00000380409 ANKRD2Q9GZV1 360 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 CPVLQ9H3G5 476 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 SPON1Q9HCB6 807 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 ZFYVE28Q9HCC9 887 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 AAASQ9NRG9 546 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.92□□□□□ -1.3
RIPK1-202ENST00000380409 FKBP14Q9NWM8 211 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 PCDHGB4Q9UN71 923 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 RTCBQ9Y3I0 505 aaKnown RBP6.92□□□□□ -1.3
RIPK1-202ENST00000380409 PCDHGB5Q9Y5G0 923 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 NHSL1Q5SYE7 1610 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 SCN7AQ01118 1682 aa6.92□□□□□ -1.3
RIPK1-202ENST00000380409 HEG1Q9ULI3 1381 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 TRAF5O00463 557 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 PFDN6O15212 129 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 ITM2AO43736 263 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 GAS8O95995 478 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 TCEA1P23193 301 aaKnown RBP6.91□□□□□ -1.3
RIPK1-202ENST00000380409 GABRB3P28472 473 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 SLC16A2P36021 539 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 RRP1BQ14684 758 aaKnown RBP6.91□□□□□ -1.3
RIPK1-202ENST00000380409 SLC15A2Q16348 729 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 VSIG1Q86XK7 387 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 CADM3Q8N126 398 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 CSGALNACT2Q8N6G5 542 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 CEP70Q8NHQ1 597 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 DTX3LQ8TDB6 740 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 TNFRSF25Q93038 417 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 GPR101Q96P66 508 aaPredicted RBP6.91□□□□□ -1.3
RIPK1-202ENST00000380409 ZC3H12CQ9C0D7 883 aaKnown RBP6.91□□□□□ -1.3
RIPK1-202ENST00000380409 FAM207AQ9NSI2 230 aaPredicted RBP6.91□□□□□ -1.3
RIPK1-202ENST00000380409 ARL8BQ9NVJ2 186 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 TAS2R1Q9NYW7 299 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 DBR1Q9UK59 544 aaKnown RBP6.91□□□□□ -1.3
RIPK1-202ENST00000380409 DOLKQ9UPQ8 538 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 IFT52Q9Y366 437 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 NR2E1Q9Y466 385 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 AK5Q9Y6K8 562 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 TTLL13PA6NNM8 815 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 FARP2O94887 1054 aaPredicted RBP6.91□□□□□ -1.3
RIPK1-202ENST00000380409 RPN1P04843 607 aaKnown RBP6.91□□□□□ -1.3
RIPK1-202ENST00000380409 CTRB1P17538 263 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 LONP1P36776 959 aaKnown RBP6.91□□□□□ -1.3
RIPK1-202ENST00000380409 ETV3P41162 512 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 PRKCIP41743 596 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 CTBSQ01459 385 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 EHHADHQ08426 723 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 SF3B4Q15427 424 aaKnown RBP eCLIP6.91□□□□□ -1.33e-6■■■■■ 35
RIPK1-202ENST00000380409 KCTD19Q17RG1 926 aaPredicted RBP6.91□□□□□ -1.3
RIPK1-202ENST00000380409 CTRB2Q6GPI1 263 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 AAGABQ6PD74 315 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 KYAT3Q6YP21 454 aaKnown RBP6.91□□□□□ -1.3
RIPK1-202ENST00000380409 LURAP1LQ8IV03 231 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 LCORLQ8N3X6 602 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 ZNF280CQ8ND82 737 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 FBXO25Q8TCJ0 367 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 ZC3H15Q8WU90 426 aaKnown RBP6.91□□□□□ -1.3
RIPK1-202ENST00000380409 AP1M1Q9BXS5 423 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 CDH19Q9H159 772 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 SIAEQ9HAT2 523 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 TYW1Q9NV66 732 aaKnown RBP6.91□□□□□ -1.3
RIPK1-202ENST00000380409 TMOD2Q9NZR1 351 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 DNMT3BQ9UBC3 853 aaKnown RBP6.91□□□□□ -1.3
RIPK1-202ENST00000380409 PHTF1Q9UMS5 762 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 CLEC11AQ9Y240 323 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 B3GNT3Q9Y2A9 372 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 ARIH1Q9Y4X5 557 aaPredicted RBP6.91□□□□□ -1.3
RIPK1-202ENST00000380409 GLI3P10071 1580 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 ZMYM2Q9UBW7 1377 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 FAM187AA6NFU0 413 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 NOTOA8MTQ0 251 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 KLRF2D3W0D1 207 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 RASGRF2O14827 1237 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 CHMP2AO43633 222 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 NOL4O94818 638 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 UFL1O94874 794 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 RHOBTB3O94955 611 aa6.91□□□□□ -1.3
RIPK1-202ENST00000380409 ZWINTO95229 277 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms