RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 C11orf49Q9H6J7 331 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 NR2E1Q9Y466 385 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.26□□□□□ -1.09
CDKL5-202ENST00000379996 A0A0B4J269 797 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 A0A1B0GUA9 196 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 K7ERI5 159 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 TP73O15350 636 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 OPA1O60313 960 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 B4GALT4O60513 344 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 MTA2O94776 668 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 LDHAP00338 332 aaKnown RBP8.26□□□□□ -1.09
CDKL5-202ENST00000379996 ITGA4P13612 1032 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 RFC2P35250 354 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 FMO5P49326 533 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 SOX10P56693 466 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 BYSLQ13895 437 aaKnown RBP8.26□□□□□ -1.09
CDKL5-202ENST00000379996 TNFAIP8L3Q5GJ75 292 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 HS2ST1Q7LGA3 356 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 ZDHHC14Q8IZN3 488 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 PLEKHO2Q8TD55 490 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 RSPH1Q8WYR4 309 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 SCUBE2Q9NQ36 999 aa8.26□□□□□ -1.09
CDKL5-202ENST00000379996 TLR3O15455 904 aaKnown RBP8.25□□□□□ -1.09
CDKL5-202ENST00000379996 TSPAN1O60635 241 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 TOM1L1O75674 476 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 PRKCBP05771 671 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 MCF2P10911 925 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 DCAF4L1Q3SXM0 396 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 EPC2Q52LR7 807 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 TMC3Q7Z5M5 1100 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 APBB1IPQ7Z5R6 666 aaPredicted RBP8.25□□□□□ -1.09
CDKL5-202ENST00000379996 ARHGEF26Q96DR7 871 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 LRCH3Q96II8 777 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 ATP6V1G3Q96LB4 118 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 OSGEPQ9NPF4 335 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 GGA2Q9UJY4 613 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 AKT3Q9Y243 479 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 PCDHB3Q9Y5E6 796 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 CCDC169A6NNP5 214 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 MYO1FO00160 1098 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 PPFIA2O75334 1257 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 EIF4BP23588 611 aaKnown RBP8.25□□□□□ -1.09
CDKL5-202ENST00000379996 ADSSP30520 456 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 MATR3P43243 847 aaKnown RBP eCLIP8.25□□□□□ -1.096e-6■■■■□ 21.9
CDKL5-202ENST00000379996 GALCP54803 685 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 CCDC181Q5TID7 509 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 YTHDF3Q7Z739 585 aaKnown RBP8.25□□□□□ -1.09
CDKL5-202ENST00000379996 GLYCTKQ8IVS8 523 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 DNAJB3Q8WWF6 145 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 TLCD1Q96CP7 247 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 MFSD14AQ96MC6 490 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 SLITRK6Q9H5Y7 841 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 ERVK-5Q9HDB9 667 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 TAS2R14Q9NYV8 317 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 A0A087WZ62 844 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 C5orf60A6NFR6 353 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 LRRIQ4A6NIV6 560 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 CCDC188H7C350 402 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 PGRMC1O00264 195 aaKnown RBP8.25□□□□□ -1.09
CDKL5-202ENST00000379996 INPPL1O15357 1258 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 CHRNA1P02708 482 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 CXCL10P02778 98 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 EDN1P05305 212 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 IQCF3P0C7M6 154 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 FERP16591 822 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 GTF2H1P32780 548 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 GNGT1P63211 74 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 IGBP1P78318 339 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 ZNF200P98182 395 aaPredicted RBP8.25□□□□□ -1.09
CDKL5-202ENST00000379996 BFSP2Q13515 415 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 SIX1Q15475 284 aaPredicted RBP8.25□□□□□ -1.09
CDKL5-202ENST00000379996 CCDC70Q6NSX1 233 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 MPZL3Q6UWV2 235 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 ZDHHC24Q6UX98 284 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 EFCAB13Q8IY85 973 aa8.25□□□□□ -1.09
CDKL5-202ENST00000379996 FDXACB1Q9BRP7 624 aaPredicted RBP8.25□□□□□ -1.09
CDKL5-202ENST00000379996 M0QZ92 97 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 KCNK3O14649 394 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 SART1O43290 800 aaKnown RBP8.24□□□□□ -1.09
CDKL5-202ENST00000379996 EXTL3O43909 919 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 BUB1BO60566 1050 aaPredicted RBP8.24□□□□□ -1.09
CDKL5-202ENST00000379996 VTNP04004 478 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 MAPK1P28482 360 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 LSP1P33241 339 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 PTGIRP43119 386 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 RPS6KA1Q15418 735 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 DUPD1Q68J44 220 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 MAEAQ7L5Y9 396 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 WNT8BQ93098 351 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 EPN3Q9H201 632 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 ZHX3Q9H4I2 956 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 MINDY3Q9H8M7 445 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 LUC7LQ9NQ29 371 aaKnown RBP8.24□□□□□ -1.09
CDKL5-202ENST00000379996 NOCTQ9UK39 431 aaKnown RBP8.24□□□□□ -1.09
CDKL5-202ENST00000379996 A6NNZ2 444 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 HMGB1P1B2RPK0 211 aaPredicted RBP8.24□□□□□ -1.09
CDKL5-202ENST00000379996 CLIC2O15247 247 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 HSF2BPO75031 334 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 CKBP12277 381 aa8.24□□□□□ -1.09
CDKL5-202ENST00000379996 HOXA11P31270 313 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms