RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 ARMCX4Q5H9R4 360 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 C10orf120Q5SQS8 335 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 CAMK1DQ8IU85 385 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 CYP4Z2PQ8N1L4 340 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 FAM45AQ8TCE6 357 aa11.71□□□□□ -0.54
PTCHD1-201ENST00000379361 H0Y3Z8 333 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 MPOP05164 745 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 MZF1P28698 734 aaPredicted RBP11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 UNC13DQ70J99 1090 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 SMYD4Q8IYR2 804 aaPredicted RBP11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 RCOR2Q8IZ40 523 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 CYFIP2Q96F07 1278 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 CLMNQ96JQ2 1002 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 VIPAS39Q9H9C1 493 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 THG1LQ9NWX6 298 aaKnown RBP11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 PLA2G4CQ9UP65 541 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 TBX22Q9Y458 520 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 NCAPD2Q15021 1401 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 GPATCH8Q9UKJ3 1502 aaKnown RBP11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 ITGA4P13612 1032 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 COX10Q12887 443 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 NCOA4Q13772 614 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 PTPAQ15257 358 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 KNOP1Q1ED39 458 aaKnown RBP11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 NOTUMQ6P988 496 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 G2E3Q7L622 706 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 ZNF496Q96IT1 587 aaPredicted RBP11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 SERPINB12Q96P63 405 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 TIPINQ9BVW5 301 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 CCDC134Q9H6E4 229 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 AHSPQ9NZD4 102 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 PEG3Q9GZU2 1588 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 TFRCP02786 760 aaKnown RBP11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 CCNE1P24864 410 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 SERPINB9P50453 376 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 ZRANB3Q5FWF4 1079 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 UNC45BQ8IWX7 931 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 RMND5BQ96G75 393 aaPredicted RBP11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 REXO5Q96IC2 774 aaKnown RBP11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 CLEC4MQ9H2X3 399 aaPredicted RBP11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 TRIT1Q9H3H1 467 aaKnown RBP11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 PRPF3O43395 683 aaKnown RBP11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 SLC39A14Q15043 492 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 SV2CQ496J9 727 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 PACSIN1Q9BY11 444 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 ZCWPW1Q9H0M4 648 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 CDY2AQ9Y6F7 541 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 CDY1Q9Y6F8 540 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 GRIN3BO60391 1043 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 TOMM20Q15388 145 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 TRIM63Q969Q1 353 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 PDCD10Q9BUL8 212 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 PCSK1NQ9UHG2 260 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 SH2B2O14492 632 aaPredicted RBP11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 C1QTNF7Q9BXJ2 289 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 RRP15Q9Y3B9 282 aaKnown RBP11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 MTSS1O43312 755 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 EIF4A1P60842 406 aaKnown RBP11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 CYP51A1Q16850 503 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 TRPM5Q9NZQ8 1165 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 FAM187AA6NFU0 413 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 C2orf81A6NN90 581 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 DTNBO60941 627 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 BEND6Q5SZJ8 279 aaPredicted RBP11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 WDR36Q8NI36 951 aaKnown RBP11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 TMA16Q96EY4 203 aaKnown RBP11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 CARD14Q9BXL6 1004 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 WDR41Q9HAD4 459 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 TMCC3Q9ULS5 477 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 ZBTB1Q9Y2K1 713 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 IFRD1O00458 451 aaPredicted RBP11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 PDIA2Q13087 525 aaKnown RBP11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 SGO1Q5FBB7 561 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 PMF1Q6P1K2 205 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 CLTBP09497 229 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 CDC16Q13042 620 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 DRAP1Q14919 205 aaPredicted RBP11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 MACC1Q6ZN28 852 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 BHMT2Q9H2M3 363 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 PTCH1Q13635 1447 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 E9PBE3 544 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 KRT74Q7RTS7 529 aa11.7□□□□□ -0.54
PTCHD1-201ENST00000379361 OLFM1Q99784 485 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 NEK6Q9HC98 313 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 PCDHA6Q9UN73 950 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 PCDHB12Q9Y5F1 795 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 PCDHA8Q9Y5H6 950 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 HLA-DQA1Q5Y7H0 255 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 GPD1LQ8N335 351 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 AGR3Q8TD06 166 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 PIGOQ8TEQ8 1089 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 ADAMTS1Q9UHI8 967 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 NFIBO00712 420 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 CYP4F11Q9HBI6 524 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 ARL2BPQ9Y2Y0 163 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 SLC16A4O15374 487 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 OTUD7AQ8TE49 926 aaPredicted RBP11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 SLC20A1Q8WUM9 679 aa11.69□□□□□ -0.54
PTCHD1-201ENST00000379361 ELAC2Q9BQ52 826 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms