RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 TRIM51Q9BSJ1 452 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.26□□□□□ -0.13
GPC6-201ENST00000377047 CYB561D2O14569 222 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 URODP06132 367 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 ZNF177Q13360 481 aaPredicted RBP14.26□□□□□ -0.13
GPC6-201ENST00000377047 C1orf131Q8NDD1 294 aaKnown RBP14.26□□□□□ -0.13
GPC6-201ENST00000377047 MTMR12Q9C0I1 747 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 WDCPQ9H6R7 721 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 AGPAT3Q9NRZ7 376 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 SCHIP1Q9P0W5 487 aaPredicted RBP14.26□□□□□ -0.13
GPC6-201ENST00000377047 TMX2Q9Y320 296 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 SUPT3HB4E1H0 165 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 MEFVO15553 781 aaPredicted RBP14.25□□□□□ -0.13
GPC6-201ENST00000377047 SUPT3HO75486 399 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 CUL2Q13617 745 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 STAT4Q14765 748 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 NAB2Q15742 525 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 MPZL3Q6UWV2 235 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 DAGLBQ8NCG7 672 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 GMCL1P1Q8NEA9 526 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 SPATA4Q8NEY3 305 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 PPP1R2P1Q96PQ5 205 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 MKNK1Q9BUB5 465 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 E2F8A0AVK6 867 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 M0QYT0 321 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 NAMPTP43490 491 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 FBXO32Q969P5 355 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 LRRC37BQ96QE4 947 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 ING2Q9H160 280 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 RSAD1Q9HA92 442 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 OGTO15294 1046 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 ZSCAN9O15535 394 aaPredicted RBP14.25□□□□□ -0.13
GPC6-201ENST00000377047 LMNAP02545 664 aaKnown RBP14.25□□□□□ -0.13
GPC6-201ENST00000377047 GUCY2CP25092 1073 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 EEF1DP29692 281 aaKnown RBP14.25□□□□□ -0.13
GPC6-201ENST00000377047 CCDC15Q0P6D6 951 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 LRRC8EQ6NSJ5 796 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 TXNRD3Q86VQ6 643 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 ZNF677Q86XU0 584 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.25□□□□□ -0.13
GPC6-201ENST00000377047 MEGF6O75095 1541 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 P4HA2O15460 535 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 FDPSP14324 419 aaKnown RBP14.25□□□□□ -0.13
GPC6-201ENST00000377047 MMP14P50281 582 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 FEZF2Q8TBJ5 459 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 TRIM4Q9C037 500 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 DDIT4Q9NX09 232 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 NRXN1Q9ULB1 1477 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 NFIBO00712 420 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 MED24O75448 989 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 ACO1P21399 889 aaKnown RBP14.25□□□□□ -0.13
GPC6-201ENST00000377047 BYSLQ13895 437 aaKnown RBP14.25□□□□□ -0.13
GPC6-201ENST00000377047 CTXN3Q4LDR2 81 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 SNX12Q9UMY4 172 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 HPS5Q9UPZ3 1129 aa14.25□□□□□ -0.13
GPC6-201ENST00000377047 CFAP99D6REC4 459 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 H0Y3Z8 333 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 COMTP21964 271 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 ATP6V1E1P36543 226 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 TAGAPQ8N103 731 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 MRPS31Q92665 395 aaKnown RBP14.24□□□□□ -0.13
GPC6-201ENST00000377047 RUBCNLQ9H714 662 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 SSU72P8A0A1W2PR75 194 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 SYCE1LA8MT33 242 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 ADM5C9JUS6 153 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 SETSIPP0DME0 302 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 UGP2Q16851 508 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 ACOT1Q86TX2 421 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 ACSF2Q96CM8 615 aaPredicted RBP14.24□□□□□ -0.13
GPC6-201ENST00000377047 APOL5Q9BWW9 433 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 GLIS2Q9BZE0 524 aaPredicted RBP14.24□□□□□ -0.13
GPC6-201ENST00000377047 SPATC1LQ9H0A9 340 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 CHORDC1Q9UHD1 332 aaPredicted RBP14.24□□□□□ -0.13
GPC6-201ENST00000377047 SCOCQ9UIL1 159 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 CTDNEP1O95476 244 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 EPHB2P29323 1055 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 PCNX4Q63HM2 1172 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 MIB1Q86YT6 1006 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 ADGRF2Q8IZF7 708 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 TRIML2Q8N7C3 387 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 OTULINQ96BN8 352 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 RPRD1AQ96P16 312 aaPredicted RBP14.24□□□□□ -0.13
GPC6-201ENST00000377047 RBM15Q96T37 977 aaKnown RBP eCLIP14.24□□□□□ -0.13
GPC6-201ENST00000377047 EPC1Q9H2F5 836 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 TRABDQ9H4I3 376 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 TASP1Q9H6P5 420 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 NEU2Q9Y3R4 380 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 GMCL1Q96IK5 515 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 SLC25A13Q9UJS0 675 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 MRFAP1Q9Y605 127 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 ITIH6Q6UXX5 1313 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 PQBP1O60828 265 aaKnown RBP14.24□□□□□ -0.13
GPC6-201ENST00000377047 DNAJB2P25686 324 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 KLHDC7AQ5VTJ3 777 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 LRRC1Q9BTT6 524 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 OSBPL8Q9BZF1 889 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 EHD4Q9H223 541 aa14.24□□□□□ -0.13
GPC6-201ENST00000377047 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.24□□□□□ -0.13
GPC6-201ENST00000377047 CHCHD3Q9NX63 227 aaKnown RBP14.24□□□□□ -0.13
GPC6-201ENST00000377047 PAK5Q9P286 719 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms