RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 CYP3A43Q9HB55 503 aa17.86■□□□□ 0.45
HLA-A-202ENST00000376806 PARVAQ9NVD7 372 aa17.86■□□□□ 0.45
HLA-A-202ENST00000376806 DERAQ9Y315 318 aa17.86■□□□□ 0.45
HLA-A-202ENST00000376806 CEP83Q9Y592 693 aa17.86■□□□□ 0.45
HLA-A-202ENST00000376806 TTI1O43156 1089 aa17.85■□□□□ 0.45
HLA-A-202ENST00000376806 PHF2O75151 1096 aa17.85■□□□□ 0.45
HLA-A-202ENST00000376806 CILPO75339 1184 aa17.85■□□□□ 0.45
HLA-A-202ENST00000376806 EIF4BP23588 611 aaKnown RBP17.85■□□□□ 0.45
HLA-A-202ENST00000376806 RBP5P82980 135 aa17.85■□□□□ 0.45
HLA-A-202ENST00000376806 SNX17Q15036 470 aa17.85■□□□□ 0.45
HLA-A-202ENST00000376806 MAATS1Q7Z4T9 603 aa17.85■□□□□ 0.45
HLA-A-202ENST00000376806 WHAMMQ8TF30 809 aa17.85■□□□□ 0.45
HLA-A-202ENST00000376806 PLEKHA5Q9HAU0 1116 aa17.85■□□□□ 0.45
HLA-A-202ENST00000376806 SNTG2Q9NY99 539 aa17.85■□□□□ 0.45
HLA-A-202ENST00000376806 HMGXB4Q9UGU5 601 aa17.85■□□□□ 0.45
HLA-A-202ENST00000376806 MED7O43513 233 aa17.84■□□□□ 0.45
HLA-A-202ENST00000376806 DUSP11O75319 330 aaKnown RBP17.84■□□□□ 0.45
HLA-A-202ENST00000376806 CYBAP13498 195 aa17.84■□□□□ 0.45
HLA-A-202ENST00000376806 AXLP30530 894 aa17.84■□□□□ 0.45
HLA-A-202ENST00000376806 AARSP49588 968 aaKnown RBP eCLIP17.84■□□□□ 0.45
HLA-A-202ENST00000376806 GABPB1Q06547 395 aaPredicted RBP17.84■□□□□ 0.45
HLA-A-202ENST00000376806 CUL1Q13616 776 aa17.84■□□□□ 0.45
HLA-A-202ENST00000376806 TRADDQ15628 312 aa17.84■□□□□ 0.45
HLA-A-202ENST00000376806 SLC13A5Q86YT5 568 aaPredicted RBP17.84■□□□□ 0.45
HLA-A-202ENST00000376806 EIF1ADQ8N9N8 165 aaKnown RBP17.84■□□□□ 0.45
HLA-A-202ENST00000376806 SLC4A11Q8NBS3 891 aa17.84■□□□□ 0.45
HLA-A-202ENST00000376806 TMEM40Q8WWA1 233 aa17.84■□□□□ 0.45
HLA-A-202ENST00000376806 TWNKQ96RR1 684 aa17.84■□□□□ 0.45
HLA-A-202ENST00000376806 CELF4Q9BZC1 486 aaKnown RBP17.84■□□□□ 0.45
HLA-A-202ENST00000376806 ARHGAP39Q9C0H5 1083 aa17.84■□□□□ 0.45
HLA-A-202ENST00000376806 ELOVL4Q9GZR5 314 aa17.84■□□□□ 0.45
HLA-A-202ENST00000376806 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.84■□□□□ 0.45
HLA-A-202ENST00000376806 MYADML2A6NDP7 307 aa17.84■□□□□ 0.45
HLA-A-202ENST00000376806 TLR3O15455 904 aaKnown RBP17.84■□□□□ 0.45
HLA-A-202ENST00000376806 GJB6O95452 261 aa17.84■□□□□ 0.45
HLA-A-202ENST00000376806 MAN1A1P33908 653 aa17.84■□□□□ 0.45
HLA-A-202ENST00000376806 FCGRTP55899 365 aa17.84■□□□□ 0.45
HLA-A-202ENST00000376806 PTPN11Q06124 597 aaPredicted RBP17.84■□□□□ 0.45
HLA-A-202ENST00000376806 DENND1BQ6P3S1 775 aa17.84■□□□□ 0.45
HLA-A-202ENST00000376806 WDTC1Q8N5D0 677 aa17.84■□□□□ 0.45
HLA-A-202ENST00000376806 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.84■□□□□ 0.45
HLA-A-202ENST00000376806 FEZF2Q8TBJ5 459 aa17.84■□□□□ 0.45
HLA-A-202ENST00000376806 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.84■□□□□ 0.45
HLA-A-202ENST00000376806 PLVAPQ9BX97 442 aa17.84■□□□□ 0.45
HLA-A-202ENST00000376806 CXCL16Q9H2A7 254 aa17.84■□□□□ 0.45
HLA-A-202ENST00000376806 TCRBV5S1A1TA0A578 114 aa17.83■□□□□ 0.44
HLA-A-202ENST00000376806 PSTPIP1O43586 416 aa17.83■□□□□ 0.44
HLA-A-202ENST00000376806 C6orf222P0C671 652 aaPredicted RBP17.83■□□□□ 0.44
HLA-A-202ENST00000376806 GNAT1P11488 350 aa17.83■□□□□ 0.44
HLA-A-202ENST00000376806 YARSP54577 528 aaKnown RBP17.83■□□□□ 0.44
HLA-A-202ENST00000376806 INCA1Q0VD86 236 aa17.83■□□□□ 0.44
HLA-A-202ENST00000376806 ORC1Q13415 861 aa17.83■□□□□ 0.44
HLA-A-202ENST00000376806 DNAJC24Q6P3W2 148 aa17.83■□□□□ 0.44
HLA-A-202ENST00000376806 C7orf31Q8N865 590 aa17.83■□□□□ 0.44
HLA-A-202ENST00000376806 PRELID2Q8N945 189 aa17.83■□□□□ 0.44
HLA-A-202ENST00000376806 TRIB2Q92519 343 aa17.83■□□□□ 0.44
HLA-A-202ENST00000376806 CFHR5Q9BXR6 569 aa17.83■□□□□ 0.44
HLA-A-202ENST00000376806 TRIM6Q9C030 488 aaPredicted RBP17.83■□□□□ 0.44
HLA-A-202ENST00000376806 LHX5Q9H2C1 402 aa17.83■□□□□ 0.44
HLA-A-202ENST00000376806 NXF3Q9H4D5 531 aaKnown RBP17.83■□□□□ 0.44
HLA-A-202ENST00000376806 PIN4Q9Y237 131 aaKnown RBP17.83■□□□□ 0.44
HLA-A-202ENST00000376806 CENPFP49454 3210 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 RECQL4O94761 1208 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 FAM153BP0C7A2 387 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 ECHS1P30084 290 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 PSMC4P43686 418 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 DR1Q01658 176 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 DHX34Q14147 1143 aaKnown RBP17.82■□□□□ 0.44
HLA-A-202ENST00000376806 FAM153CQ494X1 144 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 ERICH1Q86X53 443 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 ZDHHC14Q8IZN3 488 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 SEC14L1Q92503 715 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 DDX27Q96GQ7 796 aaKnown RBP17.82■□□□□ 0.44
HLA-A-202ENST00000376806 TMEM176AQ96HP8 235 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 ZMAT2Q96NC0 199 aaKnown RBP17.82■□□□□ 0.44
HLA-A-202ENST00000376806 TRIM51Q9BSJ1 452 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 FAM124BQ9H5Z6 455 aaPredicted RBP17.82■□□□□ 0.44
HLA-A-202ENST00000376806 MED4Q9NPJ6 270 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 CNTN3Q9P232 1028 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 FAM153AQ9UHL3 310 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.82■□□□□ 0.44
HLA-A-202ENST00000376806 HES2Q9Y543 173 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 TCRBV7S2A1N4TA0A589 114 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 KPNA6O60684 536 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 CHRNA3P32297 505 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 GJA9P57773 515 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 HLTFQ14527 1009 aaKnown RBP eCLIP17.82■□□□□ 0.44
HLA-A-202ENST00000376806 SIX1Q15475 284 aaPredicted RBP17.82■□□□□ 0.44
HLA-A-202ENST00000376806 CYP1B1Q16678 543 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 PTPN20Q4JDL3 420 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 DAB2IPQ5VWQ8 1189 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 MFSD14CQ5VZR4 134 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 TTC39CQ8N584 583 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 TSEN2Q8NCE0 465 aaKnown RBP17.82■□□□□ 0.44
HLA-A-202ENST00000376806 ZBTB9Q96C00 473 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 RAB17Q9H0T7 212 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 TUBGCP4Q9UGJ1 667 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 IP6K2Q9UHH9 426 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 MTUS1Q9ULD2 1270 aa17.82■□□□□ 0.44
HLA-A-202ENST00000376806 STRIP2Q9ULQ0 834 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms