RNA–Protein interactions for RNA: ENST00000376177.6

DDX39B-201, Transcript of DExD-box helicase 39B, humanhuman

TSL 5 BASIC

Gene DDX39B, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-201ENST00000376177 RALGPS2Q86X27 583 aaPredicted RBP11.96□□□□□ -0.5
DDX39B-201ENST00000376177 TMC8Q8IU68 726 aa11.96□□□□□ -0.5
DDX39B-201ENST00000376177 EXOC8Q8IYI6 725 aa11.96□□□□□ -0.5
DDX39B-201ENST00000376177 CCDC148Q8NFR7 591 aa11.96□□□□□ -0.5
DDX39B-201ENST00000376177 AIFM3Q96NN9 605 aa11.96□□□□□ -0.5
DDX39B-201ENST00000376177 CRISPLD1Q9H336 500 aa11.96□□□□□ -0.5
DDX39B-201ENST00000376177 KCNMB3Q9NPA1 279 aa11.96□□□□□ -0.5
DDX39B-201ENST00000376177 FBXL5Q9UKA1 691 aa11.96□□□□□ -0.5
DDX39B-201ENST00000376177 RCOR1Q9UKL0 485 aa11.96□□□□□ -0.5
DDX39B-201ENST00000376177 GPSM3Q9Y4H4 160 aa11.96□□□□□ -0.5
DDX39B-201ENST00000376177 PPME1Q9Y570 386 aa11.96□□□□□ -0.5
DDX39B-201ENST00000376177 PLXNB3Q9ULL4 1909 aa11.96□□□□□ -0.5
DDX39B-201ENST00000376177 PCNX2A6NKB5 2137 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 OBSL1O75147 1896 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 CITO14578 2027 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 CACNA1EQ15878 2313 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 LRRIQ4A6NIV6 560 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 RIOK3O14730 519 aaKnown RBP11.95□□□□□ -0.5
DDX39B-201ENST00000376177 CCP110O43303 1012 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 PRAMEF12O95522 483 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 LIG1P18858 919 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 U2AF2P26368 475 aaKnown RBP eCLIP11.95□□□□□ -0.51e-25■■■■■ 26.8
DDX39B-201ENST00000376177 EPHA7Q15375 998 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 COL28A1Q2UY09 1125 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 DAB2IPQ5VWQ8 1189 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 RNF19BQ6ZMZ0 732 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 Q6ZUG5 572 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 PDZD3Q86UT5 571 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 ARID3BQ8IVW6 561 aaPredicted RBP11.95□□□□□ -0.5
DDX39B-201ENST00000376177 TPH2Q8IWU9 490 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 CCDC112Q8NEF3 446 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 BRF1Q92994 677 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 MSANTD3Q96H12 275 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 ZNF512Q96ME7 567 aaPredicted RBP11.95□□□□□ -0.5
DDX39B-201ENST00000376177 ZNF830Q96NB3 372 aaPredicted RBP11.95□□□□□ -0.5
DDX39B-201ENST00000376177 NFKBIZQ9BYH8 718 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 AGXT2Q9BYV1 514 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 ASAH2Q9NR71 780 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 OGFRQ9NZT2 677 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 PYCARDQ9ULZ3 195 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 PCDHA4Q9UN74 947 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 NEUROG3Q9Y4Z2 214 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 NID2Q14112 1375 aa11.95□□□□□ -0.5
DDX39B-201ENST00000376177 OTOL1A6NHN0 477 aaPredicted RBP11.94□□□□□ -0.5
DDX39B-201ENST00000376177 DTNBO60941 627 aa11.94□□□□□ -0.5
DDX39B-201ENST00000376177 SLITRK3O94933 977 aa11.94□□□□□ -0.5
DDX39B-201ENST00000376177 CSRP1P21291 193 aaKnown RBP11.94□□□□□ -0.5
DDX39B-201ENST00000376177 RCAN1P53805 252 aa11.94□□□□□ -0.5
DDX39B-201ENST00000376177 TPM4P67936 248 aa11.94□□□□□ -0.5
DDX39B-201ENST00000376177 GABPB1Q06547 395 aaPredicted RBP11.94□□□□□ -0.5
DDX39B-201ENST00000376177 PPP4R3CPQ6ZMV5 832 aa11.94□□□□□ -0.5
DDX39B-201ENST00000376177 OTUD6AQ7L8S5 288 aa11.94□□□□□ -0.5
DDX39B-201ENST00000376177 CCDC186Q7Z3E2 898 aa11.94□□□□□ -0.5
DDX39B-201ENST00000376177 CEP57L1Q8IYX8 460 aa11.94□□□□□ -0.5
DDX39B-201ENST00000376177 BLIDQ8IZY5 108 aa11.94□□□□□ -0.5
DDX39B-201ENST00000376177 NECAB1Q8N987 351 aa11.94□□□□□ -0.5
DDX39B-201ENST00000376177 BSNDQ8WZ55 320 aa11.94□□□□□ -0.5
DDX39B-201ENST00000376177 BPIFA3Q9BQP9 254 aa11.94□□□□□ -0.5
DDX39B-201ENST00000376177 SMG9Q9H0W8 520 aaKnown RBP11.94□□□□□ -0.5
DDX39B-201ENST00000376177 DNAJC25Q9H1X3 360 aa11.94□□□□□ -0.5
DDX39B-201ENST00000376177 FZD8Q9H461 694 aa11.94□□□□□ -0.5
DDX39B-201ENST00000376177 FBRSL1Q9HCM7 1045 aaKnown RBP11.94□□□□□ -0.5
DDX39B-201ENST00000376177 PRDM4Q9UKN5 801 aa11.94□□□□□ -0.5
DDX39B-201ENST00000376177 SLC8A2Q9UPR5 921 aa11.94□□□□□ -0.5
DDX39B-201ENST00000376177 KALRNO60229 2985 aa11.94□□□□□ -0.5
DDX39B-201ENST00000376177 CCDC163A0A0D9SF12 145 aa11.93□□□□□ -0.5
DDX39B-201ENST00000376177 A0A1W2PQ27 194 aa11.93□□□□□ -0.5
DDX39B-201ENST00000376177 A0A1W2PQ64 194 aa11.93□□□□□ -0.5
DDX39B-201ENST00000376177 A0A1W2PQD8 194 aa11.93□□□□□ -0.5
DDX39B-201ENST00000376177 ANTXRLA6NF34 631 aa11.93□□□□□ -0.5
DDX39B-201ENST00000376177 BECN2A8MW95 431 aa11.93□□□□□ -0.5
DDX39B-201ENST00000376177 USO1O60763 962 aaKnown RBP11.93□□□□□ -0.5
DDX39B-201ENST00000376177 DKC1O60832 514 aaKnown RBP eCLIP11.93□□□□□ -0.55e-19■■□□□ 13.7
DDX39B-201ENST00000376177 RNF40O75150 1001 aa11.93□□□□□ -0.5
DDX39B-201ENST00000376177 EGFP01133 1207 aa11.93□□□□□ -0.5
DDX39B-201ENST00000376177 OR4Q2P0C623 313 aa11.93□□□□□ -0.5
DDX39B-201ENST00000376177 CCT2P78371 535 aaKnown RBP11.93□□□□□ -0.5
DDX39B-201ENST00000376177 IRX4P78413 519 aa11.93□□□□□ -0.5
DDX39B-201ENST00000376177 FGD1P98174 961 aa11.93□□□□□ -0.5
DDX39B-201ENST00000376177 AKAP17AQ02040 695 aaKnown RBP11.93□□□□□ -0.5
DDX39B-201ENST00000376177 MRPL58Q14197 206 aaKnown RBP11.93□□□□□ -0.5
DDX39B-201ENST00000376177 IQCEQ6IPM2 695 aa11.93□□□□□ -0.5
DDX39B-201ENST00000376177 MOXD1Q6UVY6 613 aa11.93□□□□□ -0.5
DDX39B-201ENST00000376177 PROSER1Q86XN7 944 aa11.93□□□□□ -0.5
DDX39B-201ENST00000376177 CEP120Q8N960 986 aa11.93□□□□□ -0.5
DDX39B-201ENST00000376177 PIGOQ8TEQ8 1089 aa11.93□□□□□ -0.5
DDX39B-201ENST00000376177 ZNF274Q96GC6 653 aaPredicted RBP11.93□□□□□ -0.5
DDX39B-201ENST00000376177 PGLYRP2Q96PD5 576 aa11.93□□□□□ -0.5
DDX39B-201ENST00000376177 RNF26Q9BY78 433 aaPredicted RBP11.93□□□□□ -0.5
DDX39B-201ENST00000376177 ZSWIM4Q9H7M6 989 aa11.93□□□□□ -0.5
DDX39B-201ENST00000376177 TMEM9BQ9NQ34 198 aa11.93□□□□□ -0.5
DDX39B-201ENST00000376177 MSRB2Q9Y3D2 182 aa11.93□□□□□ -0.5
DDX39B-201ENST00000376177 YIPF1Q9Y548 306 aa11.93□□□□□ -0.5
DDX39B-201ENST00000376177 CEP192Q8TEP8 1941 aa11.93□□□□□ -0.5
DDX39B-201ENST00000376177 CCDC196A0A1B0GTZ2 297 aa11.92□□□□□ -0.5
DDX39B-201ENST00000376177 N4BP3O15049 544 aa11.92□□□□□ -0.5
DDX39B-201ENST00000376177 MEFVO15553 781 aaPredicted RBP11.92□□□□□ -0.5
DDX39B-201ENST00000376177 AP5Z1O43299 807 aa11.92□□□□□ -0.5
DDX39B-201ENST00000376177 AKAP3O75969 853 aa11.92□□□□□ -0.5
DDX39B-201ENST00000376177 TNNT1P13805 278 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms