RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 SERPINB12Q96P63 405 aa11.41□□□□□ -0.58
CSMD2-204ENST00000373380 AIPL1Q9NZN9 384 aa11.41□□□□□ -0.58
CSMD2-204ENST00000373380 CNTNAP4Q9C0A0 1308 aa11.41□□□□□ -0.58
CSMD2-204ENST00000373380 RARBP10826 455 aa11.41□□□□□ -0.58
CSMD2-204ENST00000373380 SCTRP47872 440 aa11.41□□□□□ -0.58
CSMD2-204ENST00000373380 TMEM62Q0P6H9 643 aa11.41□□□□□ -0.58
CSMD2-204ENST00000373380 MEA1Q16626 185 aa11.41□□□□□ -0.58
CSMD2-204ENST00000373380 TKFCQ3LXA3 575 aa11.41□□□□□ -0.58
CSMD2-204ENST00000373380 ANO5Q75V66 913 aa11.41□□□□□ -0.58
CSMD2-204ENST00000373380 MICALL2Q8IY33 904 aa11.41□□□□□ -0.58
CSMD2-204ENST00000373380 KIRREL3Q8IZU9 778 aa11.41□□□□□ -0.58
CSMD2-204ENST00000373380 SCG3Q8WXD2 468 aaKnown RBP11.41□□□□□ -0.58
CSMD2-204ENST00000373380 CAVIN3Q969G5 261 aa11.41□□□□□ -0.58
CSMD2-204ENST00000373380 SLC35C1Q96A29 364 aa11.41□□□□□ -0.58
CSMD2-204ENST00000373380 NIF3L1Q9GZT8 377 aa11.41□□□□□ -0.58
CSMD2-204ENST00000373380 SARS2Q9NP81 518 aaKnown RBP11.41□□□□□ -0.58
CSMD2-204ENST00000373380 ANKEF1Q9NU02 776 aa11.41□□□□□ -0.58
CSMD2-204ENST00000373380 CNOT7Q9UIV1 285 aaKnown RBP11.41□□□□□ -0.58
CSMD2-204ENST00000373380 SCN11AQ9UI33 1791 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 H3BRJ5 948 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 MAP2K7O14733 419 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 NPTX2P47972 431 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 KCNA1Q09470 495 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 NAIF1Q69YI7 327 aaPredicted RBP11.4□□□□□ -0.58
CSMD2-204ENST00000373380 ZNF280CQ8ND82 737 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 FOXP3Q9BZS1 431 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 PNMA3Q9UL41 463 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 BCL9O00512 1426 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 DDX3XO00571 662 aaKnown RBP eCLIP11.4□□□□□ -0.58
CSMD2-204ENST00000373380 EXTL3O43909 919 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 CCND1P24385 295 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 SOX10P56693 466 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 PRAMEP78395 509 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 CACNB2Q08289 660 aaPredicted RBP11.4□□□□□ -0.58
CSMD2-204ENST00000373380 KCNMA1Q12791 1236 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 WDR59Q6PJI9 974 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 SV2AQ7L0J3 742 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 SPIRE2Q8WWL2 714 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 SLC5A5Q92911 643 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 ZNF142P52746 1687 aaPredicted RBP11.4□□□□□ -0.58
CSMD2-204ENST00000373380 TYW5A2RUC4 315 aaKnown RBP11.4□□□□□ -0.58
CSMD2-204ENST00000373380 TRIM49D1C9J1S8 452 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 RNF225M0QZC1 329 aaPredicted RBP11.4□□□□□ -0.58
CSMD2-204ENST00000373380 ZFXP17010 805 aaPredicted RBP11.4□□□□□ -0.58
CSMD2-204ENST00000373380 RBP5P82980 135 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 KLC1Q07866 573 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 VPS72Q15906 364 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 TTC8Q8TAM2 541 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 FAM111AQ96PZ2 611 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 MMP19Q99542 508 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 SPON2Q9BUD6 331 aa11.4□□□□□ -0.58
CSMD2-204ENST00000373380 GCOM2Q9BZD3 368 aaPredicted RBP11.4□□□□□ -0.58
CSMD2-204ENST00000373380 TSR3Q9UJK0 312 aaKnown RBP11.4□□□□□ -0.58
CSMD2-204ENST00000373380 SNRPAP09012 282 aaKnown RBP11.39□□□□□ -0.59
CSMD2-204ENST00000373380 MYBL2P10244 700 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 GZMAP12544 262 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 CENPCQ03188 943 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 CUL2Q13617 745 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 MXD4Q14582 209 aaPredicted RBP11.39□□□□□ -0.59
CSMD2-204ENST00000373380 TNS2Q63HR2 1409 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 C16orf87Q6PH81 154 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 MOXD1Q6UVY6 613 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 ICA1LQ8NDH6 482 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 USP33Q8TEY7 942 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.39□□□□□ -0.59
CSMD2-204ENST00000373380 HAO1Q9UJM8 370 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 USP20Q9Y2K6 914 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 FAM86B1E9PN63 330 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 FAM86B2P0C5J1 330 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 XPAP23025 273 aaPredicted RBP11.39□□□□□ -0.59
CSMD2-204ENST00000373380 CTCFP49711 727 aaPredicted RBP11.39□□□□□ -0.59
CSMD2-204ENST00000373380 NLRP11P59045 1033 aaKnown RBP11.39□□□□□ -0.59
CSMD2-204ENST00000373380 EN1Q05925 392 aaPredicted RBP11.39□□□□□ -0.59
CSMD2-204ENST00000373380 COBLL1Q53SF7 1204 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 TTC39CQ8N584 583 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 CCDC33Q8N5R6 958 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 MANSC1Q9H8J5 431 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 METTL5Q9NRN9 209 aaKnown RBP11.39□□□□□ -0.59
CSMD2-204ENST00000373380 WARS2Q9UGM6 360 aaKnown RBP11.39□□□□□ -0.59
CSMD2-204ENST00000373380 NFIBO00712 420 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 UBOX5O94941 541 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 ENO3P13929 434 aaPredicted RBP11.39□□□□□ -0.59
CSMD2-204ENST00000373380 TMEM132DQ14C87 1099 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 SAMD7Q7Z3H4 446 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 KCTD17Q8N5Z5 321 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 AENQ8WTP8 325 aaKnown RBP11.39□□□□□ -0.59
CSMD2-204ENST00000373380 HAUS8Q9BT25 410 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.39□□□□□ -0.59
CSMD2-204ENST00000373380 PHTF1Q9UMS5 762 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 L3MBTL1Q9Y468 752 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 ORC6Q9Y5N6 252 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 ATRNO75882 1429 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 TMEM150BA6NC51 233 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 IFI35P80217 286 aaPredicted RBP11.39□□□□□ -0.59
CSMD2-204ENST00000373380 EFTUD2Q15029 972 aaKnown RBP eCLIP11.39□□□□□ -0.59
CSMD2-204ENST00000373380 ATF7IP2Q5U623 682 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 DNAJC9Q8WXX5 260 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 TATDN2Q93075 761 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 RSAD1Q9HA92 442 aa11.39□□□□□ -0.59
CSMD2-204ENST00000373380 PIN4Q9Y237 131 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms