RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 POLD4Q9HCU8 107 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 FAM198AQ9UFP1 575 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 NVLO15381 856 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 SLC12A2P55011 1212 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 DAB2IPQ5VWQ8 1189 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 LONP2Q86WA8 852 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 CDKL3Q8IVW4 592 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 TMCO5AQ8N6Q1 288 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 OR2W6PQ8NHA6 318 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 FAM161BQ96MY7 647 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 DLGAP2Q9P1A6 1054 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 TEKT2Q9UIF3 430 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 NEU2Q9Y3R4 380 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 HAUS5O94927 633 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 CYP11B1P15538 503 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 NCF2P19878 526 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 ZBTB33Q86T24 672 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 TLK2Q86UE8 772 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 THNSL1Q8IYQ7 743 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 TSEN2Q8NCE0 465 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 ATXN2LQ8WWM7 1075 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 HEMGNQ9BXL5 484 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 ST6GALNAC4Q9H4F1 302 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 PDP2Q9P2J9 529 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 AP3B1O00203 1094 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 FSBPO95073 299 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 STAT5BP51692 787 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 STX1BP61266 288 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 TRIP13Q15645 432 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 TMEM259Q4ZIN3 620 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 ARSHQ5FYA8 562 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 ZC3H3Q8IXZ2 948 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 PDCD2LQ9BRP1 358 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 PXMP2Q9NR77 195 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 NXF1Q9UBU9 619 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 SIPA1L3O60292 1781 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 WTIPA6NIX2 430 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 GOLGA8SH3BPF8 625 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 COPEO14579 308 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 ZNF263O14978 683 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 CFLARO15519 480 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 FGFR4P22455 802 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 MAGEA4P43358 317 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 SERPINB10P48595 397 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 CUL2Q13617 745 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 SRRM1Q8IYB3 904 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 APBB2Q92870 758 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 ARHGEF26Q96DR7 871 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 NDEL1Q9GZM8 345 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 SEPT3Q9UH03 358 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 SLC24A2Q9UI40 661 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 MAGEA13PA6NCF6 341 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 FAM47DPA6NHR8 397 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 SYCE1LA8MT33 242 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 HNRNPCL2B2RXH8 293 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 RIPK2O43353 540 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 TRIM16O95361 564 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 SLC25A27O95847 323 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 CASP2P42575 452 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 ARSEP51690 589 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 NCKAP1LP55160 1127 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 AP1B1Q10567 949 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 ZNF568Q3ZCX4 644 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 ARMCX2Q7L311 632 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 RASSF3Q86WH2 238 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 MFN1Q8IWA4 741 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 FAF2Q96CS3 445 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 C18orf8Q96DM3 657 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 KIAA1257Q9ULG3 409 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 ARHGEF37A1IGU5 675 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 WDR91A4D1P6 747 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 IQCA1LA6NCM1 817 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 PMM2O15305 246 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 ZBED1O96006 694 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 ABL1P00519 1130 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 STIP1P31948 543 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 ZNF844Q08AG5 666 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 EMC2Q15006 297 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 EAPPQ56P03 285 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 DNERQ8NFT8 737 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 MAGEB18Q96M61 343 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 UPF3AQ9H1J1 476 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 SMYD3Q9H7B4 428 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 PARVBQ9HBI1 364 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 NOD2Q9HC29 1040 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 PSMC3IPQ9P2W1 217 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 BCS1LQ9Y276 419 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 ACTL7BQ9Y614 415 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 M0QZ92 97 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 TULP2O00295 520 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 CCDC22O60826 627 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 AP1G2O75843 785 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 OATP04181 439 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 UBTFL6P0CB48 400 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 CD58P19256 250 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 MLH1P40692 756 aa5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 IREB2P48200 963 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 KPNA2P52292 529 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-204ENST00000366767 ITGA8P53708 1063 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms