RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 USP17L13C9JLJ4 530 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 USP17L11C9JVI0 530 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 USP17L18D6R9N7 530 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 USP17L22D6RA61 530 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 USP17L17D6RBQ6 530 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 USP17L19D6RCP7 530 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 USP17L20D6RJB6 530 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 KCNN4O15554 427 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 FAM58BPP0C7Q3 252 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 SCP2P22307 547 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 YY1P25490 414 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 TPP2P29144 1249 aaPredicted RBP13.4□□□□□ -0.26
SMC4-202ENST00000357388 USP17L24Q0WX57 530 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 ZNF394Q53GI3 561 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 ARMC4Q5T2S8 1044 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 SENP7Q9BQF6 1050 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 KATNAL1Q9BW62 490 aa13.4□□□□□ -0.26
SMC4-202ENST00000357388 SRP68Q9UHB9 627 aaKnown RBP13.4□□□□□ -0.26
SMC4-202ENST00000357388 CNOT3O75175 753 aaKnown RBP13.4□□□□□ -0.27
SMC4-202ENST00000357388 BCL10O95999 233 aa13.4□□□□□ -0.27
SMC4-202ENST00000357388 PRR29P0C7W0 189 aa13.4□□□□□ -0.27
SMC4-202ENST00000357388 OASLQ15646 514 aaKnown RBP13.4□□□□□ -0.27
SMC4-202ENST00000357388 TAB1Q15750 504 aa13.4□□□□□ -0.27
SMC4-202ENST00000357388 WDR93Q6P2C0 686 aa13.4□□□□□ -0.27
SMC4-202ENST00000357388 GPD1LQ8N335 351 aa13.4□□□□□ -0.27
SMC4-202ENST00000357388 FAM45AQ8TCE6 357 aa13.4□□□□□ -0.27
SMC4-202ENST00000357388 APBB2Q92870 758 aa13.4□□□□□ -0.27
SMC4-202ENST00000357388 ELMO2Q96JJ3 720 aa13.4□□□□□ -0.27
SMC4-202ENST00000357388 KCNF1Q9H3M0 494 aa13.4□□□□□ -0.27
SMC4-202ENST00000357388 PRDM5Q9NQX1 630 aaPredicted RBP13.4□□□□□ -0.27
SMC4-202ENST00000357388 IGSF1Q8N6C5 1336 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 CLASP1Q7Z460 1538 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 CAPN1P07384 714 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 NAB2Q15742 525 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 KLHL12Q53G59 568 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 BNC2Q6ZN30 1099 aaPredicted RBP13.39□□□□□ -0.27
SMC4-202ENST00000357388 USP38Q8NB14 1042 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 FAM213AQ9BRX8 229 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 NARFQ9UHQ1 456 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 SNX17Q15036 470 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 TAF2Q6P1X5 1199 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 HES6Q96HZ4 224 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 CD209Q9NNX6 404 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 ARHGEF3Q9NR81 526 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 SNPHO15079 494 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 RAD51CO43502 376 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 SPDYAQ5MJ70 313 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 PTPRN2Q92932 1015 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 HPS3Q969F9 1004 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 CCDC126Q96EE4 140 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 PUS7LQ9H0K6 701 aaKnown RBP13.39□□□□□ -0.27
SMC4-202ENST00000357388 RABGEF1Q9UJ41 708 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 ATP9BO43861 1147 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 ATP6V1G2O95670 118 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 ATP5BP06576 529 aaKnown RBP13.39□□□□□ -0.27
SMC4-202ENST00000357388 POLBP06746 335 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 FNTAP49354 379 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 ANXA11P50995 505 aaKnown RBP13.39□□□□□ -0.27
SMC4-202ENST00000357388 CACNA2D1P54289 1103 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 PTPN12Q05209 780 aaKnown RBP13.39□□□□□ -0.27
SMC4-202ENST00000357388 CHRNB3Q05901 458 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 IFNEQ86WN2 208 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 LRRC34Q8IZ02 419 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 SYNE4Q8N205 404 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 SLC35G2Q8TBE7 412 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 GTF3C2Q8WUA4 911 aaPredicted RBP13.39□□□□□ -0.27
SMC4-202ENST00000357388 SYN2Q92777 582 aaPredicted RBP13.39□□□□□ -0.27
SMC4-202ENST00000357388 MCRS1Q96EZ8 462 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 RBM12Q9NTZ6 932 aaKnown RBP13.39□□□□□ -0.27
SMC4-202ENST00000357388 TAGLN3Q9UI15 199 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 PHTF1Q9UMS5 762 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 CLCA2Q9UQC9 943 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 LRCH1Q9Y2L9 728 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 KLHL20Q9Y2M5 609 aa13.39□□□□□ -0.27
SMC4-202ENST00000357388 ZNF335Q9H4Z2 1342 aaPredicted RBP13.38□□□□□ -0.27
SMC4-202ENST00000357388 CFAP99D6REC4 459 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 SLCO1B7G3V0H7 640 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 PTPN4P29074 926 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 NUDT2P50583 147 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 DMPKQ09013 629 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 CHI3L2Q15782 390 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 LPCAT2Q7L5N7 544 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 NLRP9Q7RTR0 991 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 WNK4Q96J92 1243 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 MARCOQ9UEW3 520 aaPredicted RBP13.38□□□□□ -0.27
SMC4-202ENST00000357388 TARSP26639 723 aaKnown RBP13.38□□□□□ -0.27
SMC4-202ENST00000357388 SEC24CP53992 1094 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 PTK6Q13882 451 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 PROSER3Q2NL68 480 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 BARGINQ6ZT62 677 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 ASZ1Q8WWH4 475 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 SPRTNQ9H040 489 aaPredicted RBP13.38□□□□□ -0.27
SMC4-202ENST00000357388 TUBA8Q9NY65 449 aaPredicted RBP13.38□□□□□ -0.27
SMC4-202ENST00000357388 RGL1Q9NZL6 768 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 BIVM-ERCC5R4GMW8 1640 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 ZNF185O15231 689 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 GLRA3O75311 464 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 TMEM253P0C7T8 217 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 PEX5P50542 639 aa13.38□□□□□ -0.27
SMC4-202ENST00000357388 SPP2Q13103 211 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms