RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 PCNX2A6NKB5 2137 aa17.29■□□□□ 0.36
DDX55-202ENST00000354291 IGSF10Q6WRI0 2623 aa17.29■□□□□ 0.36
DDX55-202ENST00000354291 SPAARA0A1B0GVQ0 90 aa17.29■□□□□ 0.36
DDX55-202ENST00000354291 OTOL1A6NHN0 477 aaPredicted RBP17.29■□□□□ 0.36
DDX55-202ENST00000354291 K7ERI5 159 aa17.29■□□□□ 0.36
DDX55-202ENST00000354291 DTNBO60941 627 aa17.29■□□□□ 0.36
DDX55-202ENST00000354291 FGF19O95750 216 aa17.29■□□□□ 0.36
DDX55-202ENST00000354291 SPATA31C1P0DKV0 1188 aa17.29■□□□□ 0.36
DDX55-202ENST00000354291 KCNE1P15382 129 aa17.29■□□□□ 0.36
DDX55-202ENST00000354291 CYP11B2P19099 503 aa17.29■□□□□ 0.36
DDX55-202ENST00000354291 USP39Q53GS9 565 aaKnown RBP17.29■□□□□ 0.36
DDX55-202ENST00000354291 CATSPER3Q86XQ3 398 aa17.29■□□□□ 0.36
DDX55-202ENST00000354291 ATAD1Q8NBU5 361 aa17.29■□□□□ 0.36
DDX55-202ENST00000354291 PIGKQ92643 395 aa17.29■□□□□ 0.36
DDX55-202ENST00000354291 TCHPQ9BT92 498 aa17.29■□□□□ 0.36
DDX55-202ENST00000354291 CDT1Q9H211 546 aa17.29■□□□□ 0.36
DDX55-202ENST00000354291 BRMS1Q9HCU9 246 aa17.29■□□□□ 0.36
DDX55-202ENST00000354291 HPS4Q9NQG7 708 aa17.29■□□□□ 0.36
DDX55-202ENST00000354291 ASB3Q9Y575 518 aa17.29■□□□□ 0.36
DDX55-202ENST00000354291 ARHGEF35A5YM69 484 aa17.28■□□□□ 0.36
DDX55-202ENST00000354291 DRD1P21728 446 aa17.28■□□□□ 0.36
DDX55-202ENST00000354291 MAPK8P45983 427 aa17.28■□□□□ 0.36
DDX55-202ENST00000354291 DHPSP49366 369 aaPredicted RBP17.28■□□□□ 0.36
DDX55-202ENST00000354291 NEK4P51957 841 aa17.28■□□□□ 0.36
DDX55-202ENST00000354291 SIM1P81133 766 aaPredicted RBP17.28■□□□□ 0.36
DDX55-202ENST00000354291 AMPD2Q01433 879 aa17.28■□□□□ 0.36
DDX55-202ENST00000354291 PSMD2Q13200 908 aa17.28■□□□□ 0.36
DDX55-202ENST00000354291 GPR17Q13304 367 aa17.28■□□□□ 0.36
DDX55-202ENST00000354291 DMC1Q14565 340 aa17.28■□□□□ 0.36
DDX55-202ENST00000354291 ME3Q16798 604 aa17.28■□□□□ 0.36
DDX55-202ENST00000354291 ZNF568Q3ZCX4 644 aa17.28■□□□□ 0.36
DDX55-202ENST00000354291 PMS2CLQ68D20 193 aa17.28■□□□□ 0.36
DDX55-202ENST00000354291 CENPPQ6IPU0 288 aa17.28■□□□□ 0.36
DDX55-202ENST00000354291 SYT13Q7L8C5 426 aa17.28■□□□□ 0.36
DDX55-202ENST00000354291 USP37Q86T82 979 aa17.28■□□□□ 0.36
DDX55-202ENST00000354291 PDZD3Q86UT5 571 aa17.28■□□□□ 0.36
DDX55-202ENST00000354291 GTF3C6Q969F1 213 aa17.28■□□□□ 0.36
DDX55-202ENST00000354291 PSMG2Q969U7 264 aa17.28■□□□□ 0.36
DDX55-202ENST00000354291 CHFRQ96EP1 664 aa17.28■□□□□ 0.36
DDX55-202ENST00000354291 FAM83CQ9BQN1 747 aa17.28■□□□□ 0.36
DDX55-202ENST00000354291 EBF1Q9UH73 591 aa17.28■□□□□ 0.36
DDX55-202ENST00000354291 GON4LQ3T8J9 2241 aa17.28■□□□□ 0.36
DDX55-202ENST00000354291 EML5Q05BV3 1969 aa17.28■□□□□ 0.36
DDX55-202ENST00000354291 MED24O75448 989 aa17.27■□□□□ 0.36
DDX55-202ENST00000354291 OAZ2O95190 189 aa17.27■□□□□ 0.36
DDX55-202ENST00000354291 CENPBP07199 599 aaPredicted RBP17.27■□□□□ 0.36
DDX55-202ENST00000354291 HARSP12081 509 aaKnown RBP17.27■□□□□ 0.36
DDX55-202ENST00000354291 FDPSP14324 419 aaKnown RBP17.27■□□□□ 0.36
DDX55-202ENST00000354291 KRT2P35908 639 aa17.27■□□□□ 0.36
DDX55-202ENST00000354291 CDR1P51861 262 aa17.27■□□□□ 0.36
DDX55-202ENST00000354291 NR5A1Q13285 461 aa17.27■□□□□ 0.36
DDX55-202ENST00000354291 NAIF1Q69YI7 327 aaPredicted RBP17.27■□□□□ 0.36
DDX55-202ENST00000354291 ITIH5Q86UX2 942 aa17.27■□□□□ 0.36
DDX55-202ENST00000354291 TMEM130Q8N3G9 435 aa17.27■□□□□ 0.36
DDX55-202ENST00000354291 TTC9BQ8N6N2 239 aa17.27■□□□□ 0.36
DDX55-202ENST00000354291 NECAB1Q8N987 351 aa17.27■□□□□ 0.36
DDX55-202ENST00000354291 ACO2Q99798 780 aaKnown RBP17.27■□□□□ 0.36
DDX55-202ENST00000354291 P2RY13Q9BPV8 354 aa17.27■□□□□ 0.36
DDX55-202ENST00000354291 POLR3CQ9BUI4 534 aaPredicted RBP17.27■□□□□ 0.36
DDX55-202ENST00000354291 SLC46A2Q9BY10 475 aa17.27■□□□□ 0.36
DDX55-202ENST00000354291 TPSD1Q9BZJ3 242 aa17.27■□□□□ 0.36
DDX55-202ENST00000354291 DAXXQ9UER7 740 aaPredicted RBP17.27■□□□□ 0.36
DDX55-202ENST00000354291 KIF26AQ9ULI4 1882 aaPredicted RBP17.27■□□□□ 0.35
DDX55-202ENST00000354291 BPTFQ12830 3046 aa17.26■□□□□ 0.35
DDX55-202ENST00000354291 CCDC169A6NNP5 214 aa17.26■□□□□ 0.35
DDX55-202ENST00000354291 ARSAP15289 507 aa17.26■□□□□ 0.35
DDX55-202ENST00000354291 WEE1P30291 646 aa17.26■□□□□ 0.35
DDX55-202ENST00000354291 RDXP35241 583 aaKnown RBP17.26■□□□□ 0.35
DDX55-202ENST00000354291 FBXO43Q4G163 708 aa17.26■□□□□ 0.35
DDX55-202ENST00000354291 PROSER1Q86XN7 944 aa17.26■□□□□ 0.35
DDX55-202ENST00000354291 CHCHD4Q8N4Q1 142 aa17.26■□□□□ 0.35
DDX55-202ENST00000354291 GCNAQ96QF7 691 aa17.26■□□□□ 0.35
DDX55-202ENST00000354291 LPIN3Q9BQK8 851 aa17.26■□□□□ 0.35
DDX55-202ENST00000354291 OXCT2Q9BYC2 517 aaPredicted RBP17.26■□□□□ 0.35
DDX55-202ENST00000354291 TUFT1Q9NNX1 390 aa17.26■□□□□ 0.35
DDX55-202ENST00000354291 CNTN3Q9P232 1028 aa17.26■□□□□ 0.35
DDX55-202ENST00000354291 GPSM3Q9Y4H4 160 aa17.26■□□□□ 0.35
DDX55-202ENST00000354291 HELZ2Q9BYK8 2649 aaKnown RBP17.25■□□□□ 0.35
DDX55-202ENST00000354291 OR6C75A6NL08 312 aa17.25■□□□□ 0.35
DDX55-202ENST00000354291 NEMFO60524 1076 aa17.25■□□□□ 0.35
DDX55-202ENST00000354291 BCKDHBP21953 392 aa17.25■□□□□ 0.35
DDX55-202ENST00000354291 LMAN2Q12907 356 aa17.25■□□□□ 0.35
DDX55-202ENST00000354291 TRIM29Q14134 588 aa17.25■□□□□ 0.35
DDX55-202ENST00000354291 TAF12Q16514 161 aa17.25■□□□□ 0.35
DDX55-202ENST00000354291 COL28A1Q2UY09 1125 aa17.25■□□□□ 0.35
DDX55-202ENST00000354291 TRIM61Q5EBN2 209 aa17.25■□□□□ 0.35
DDX55-202ENST00000354291 CC2D1AQ6P1N0 951 aaPredicted RBP17.25■□□□□ 0.35
DDX55-202ENST00000354291 DSTYKQ6XUX3 929 aa17.25■□□□□ 0.35
DDX55-202ENST00000354291 C11orf74Q86VG3 221 aa17.25■□□□□ 0.35
DDX55-202ENST00000354291 TTC30AQ86WT1 665 aa17.25■□□□□ 0.35
DDX55-202ENST00000354291 CMTM8Q8IZV2 173 aa17.25■□□□□ 0.35
DDX55-202ENST00000354291 TSTD1Q8NFU3 115 aa17.25■□□□□ 0.35
DDX55-202ENST00000354291 TARS2Q9BW92 718 aaKnown RBP17.25■□□□□ 0.35
DDX55-202ENST00000354291 NUSAP1Q9BXS6 441 aaKnown RBP17.25■□□□□ 0.35
DDX55-202ENST00000354291 PTPRHQ9HD43 1115 aa17.25■□□□□ 0.35
DDX55-202ENST00000354291 TUBGCP4Q9UGJ1 667 aa17.25■□□□□ 0.35
DDX55-202ENST00000354291 CCL26Q9Y258 94 aa17.25■□□□□ 0.35
DDX55-202ENST00000354291 ASXL3Q9C0F0 2248 aa17.24■□□□□ 0.35
DDX55-202ENST00000354291 ASH1LQ9NR48 2969 aaKnown RBP17.24■□□□□ 0.35
DDX55-202ENST00000354291 MTMR11A4FU01 709 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms