RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 SNRPFP62306 86 aaKnown RBP17.21■□□□□ 0.35
RDX-201ENST00000343115 DUPD1Q68J44 220 aa17.21■□□□□ 0.35
RDX-201ENST00000343115 CRLF3Q8IUI8 442 aa17.21■□□□□ 0.35
RDX-201ENST00000343115 NUDCD3Q8IVD9 361 aa17.21■□□□□ 0.35
RDX-201ENST00000343115 CCDC60Q8IWA6 550 aaPredicted RBP17.21■□□□□ 0.35
RDX-201ENST00000343115 SH3GL2Q99962 352 aa17.21■□□□□ 0.35
RDX-201ENST00000343115 CISHQ9NSE2 258 aa17.21■□□□□ 0.35
RDX-201ENST00000343115 GCLCP48506 637 aaPredicted RBP17.21■□□□□ 0.35
RDX-201ENST00000343115 OTUD4Q01804 1114 aaKnown RBP17.21■□□□□ 0.35
RDX-201ENST00000343115 CENPCQ03188 943 aa17.21■□□□□ 0.35
RDX-201ENST00000343115 KDSRQ06136 332 aa17.21■□□□□ 0.35
RDX-201ENST00000343115 ATF7IP2Q5U623 682 aa17.21■□□□□ 0.35
RDX-201ENST00000343115 SIX6OS1Q8N1H7 587 aa17.21■□□□□ 0.35
RDX-201ENST00000343115 KREMEN1Q96MU8 473 aa17.21■□□□□ 0.35
RDX-201ENST00000343115 WHRNQ9P202 907 aa17.21■□□□□ 0.35
RDX-201ENST00000343115 ITGB3P05106 788 aa17.21■□□□□ 0.34
RDX-201ENST00000343115 RPAINQ86UA6 219 aa17.21■□□□□ 0.34
RDX-201ENST00000343115 ZNF677Q86XU0 584 aa17.21■□□□□ 0.34
RDX-201ENST00000343115 FAM161BQ96MY7 647 aa17.21■□□□□ 0.34
RDX-201ENST00000343115 AGAP3Q96P47 875 aa17.21■□□□□ 0.34
RDX-201ENST00000343115 TTC1Q99614 292 aa17.21■□□□□ 0.34
RDX-201ENST00000343115 DCLK3Q9C098 648 aa17.21■□□□□ 0.34
RDX-201ENST00000343115 DNPEPQ9ULA0 475 aa17.21■□□□□ 0.34
RDX-201ENST00000343115 USH1CQ9Y6N9 552 aa17.21■□□□□ 0.34
RDX-201ENST00000343115 SUPT20HL2P0C7V6 817 aa17.2■□□□□ 0.34
RDX-201ENST00000343115 CDH8P55286 799 aa17.2■□□□□ 0.34
RDX-201ENST00000343115 ANKRD20A8PQ5CZ79 823 aa17.2■□□□□ 0.34
RDX-201ENST00000343115 ABRAQ8N0Z2 381 aa17.2■□□□□ 0.34
RDX-201ENST00000343115 TMEM161BQ8NDZ6 487 aa17.2■□□□□ 0.34
RDX-201ENST00000343115 GBP5Q96PP8 586 aa17.2■□□□□ 0.34
RDX-201ENST00000343115 GPATCH2LQ9NWQ4 482 aa17.2■□□□□ 0.34
RDX-201ENST00000343115 F8VP50 259 aa17.2■□□□□ 0.34
RDX-201ENST00000343115 VWA5AO00534 786 aa17.2■□□□□ 0.34
RDX-201ENST00000343115 CFLARO15519 480 aa17.2■□□□□ 0.34
RDX-201ENST00000343115 ETS1P14921 441 aa17.2■□□□□ 0.34
RDX-201ENST00000343115 OSBPP22059 807 aa17.2■□□□□ 0.34
RDX-201ENST00000343115 EFCAB12Q6NXP0 572 aa17.2■□□□□ 0.34
RDX-201ENST00000343115 EXOC8Q8IYI6 725 aa17.2■□□□□ 0.34
RDX-201ENST00000343115 FAM71AQ8IYT1 594 aa17.2■□□□□ 0.34
RDX-201ENST00000343115 TRAPPC12Q8WVT3 735 aa17.2■□□□□ 0.34
RDX-201ENST00000343115 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.2■□□□□ 0.34
RDX-201ENST00000343115 HAO1Q9UJM8 370 aa17.2■□□□□ 0.34
RDX-201ENST00000343115 M0QZ92 97 aa17.2■□□□□ 0.34
RDX-201ENST00000343115 RASIP1Q5U651 963 aa17.2■□□□□ 0.34
RDX-201ENST00000343115 GRAMD1AQ96CP6 724 aa17.2■□□□□ 0.34
RDX-201ENST00000343115 CCDC124Q96CT7 223 aaKnown RBP17.2■□□□□ 0.34
RDX-201ENST00000343115 CYP4F11Q9HBI6 524 aa17.2■□□□□ 0.34
RDX-201ENST00000343115 KLHL8Q9P2G9 620 aaPredicted RBP17.2■□□□□ 0.34
RDX-201ENST00000343115 WRAP73Q9P2S5 460 aaPredicted RBP17.2■□□□□ 0.34
RDX-201ENST00000343115 ZC3H7BQ9UGR2 993 aaKnown RBP17.2■□□□□ 0.34
RDX-201ENST00000343115 L3MBTL1Q9Y468 752 aa17.2■□□□□ 0.34
RDX-201ENST00000343115 MYH6P13533 1939 aa17.2■□□□□ 0.34
RDX-201ENST00000343115 IGLV3-22A0A075B6J6 115 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 NME3Q13232 169 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 HEATR6Q6AI08 1181 aaKnown RBP17.19■□□□□ 0.34
RDX-201ENST00000343115 CD302Q8IX05 232 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 SHC3Q92529 594 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 ABCF3Q9NUQ8 709 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 SLIT2O94813 1529 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 CCNA1P78396 465 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 AMHR2Q16671 573 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 BTNL9Q6UXG8 535 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 MAP4K3Q8IVH8 894 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 TRIM42Q8IWZ5 723 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 MCUQ8NE86 351 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 LENG9Q96B70 501 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 SSTR1P30872 391 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 JAG1P78504 1218 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 AP1B1Q10567 949 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 PTK7Q13308 1070 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 TTLL4Q14679 1199 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 PDZD4Q76G19 769 aaPredicted RBP17.19■□□□□ 0.34
RDX-201ENST00000343115 TSSK1BQ9BXA7 367 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 NINJ2Q9NZG7 142 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 PHTF1Q9UMS5 762 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 SMG5Q9UPR3 1016 aaKnown RBP17.19■□□□□ 0.34
RDX-201ENST00000343115 PECAM1P16284 738 aaPredicted RBP17.19■□□□□ 0.34
RDX-201ENST00000343115 CHKAP35790 457 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 COPS2P61201 443 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 ATG16L1Q676U5 607 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 LONP2Q86WA8 852 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 APOBEC3FQ8IUX4 373 aaKnown RBP17.19■□□□□ 0.34
RDX-201ENST00000343115 SENP1Q9P0U3 644 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 PCDHA2Q9Y5H9 948 aa17.19■□□□□ 0.34
RDX-201ENST00000343115 SMIM24O75264 130 aa17.18■□□□□ 0.34
RDX-201ENST00000343115 PPFIA2O75334 1257 aa17.18■□□□□ 0.34
RDX-201ENST00000343115 GARSP41250 739 aaKnown RBP17.18■□□□□ 0.34
RDX-201ENST00000343115 GTF2BQ00403 316 aa17.18■□□□□ 0.34
RDX-201ENST00000343115 CCNG2Q16589 344 aa17.18■□□□□ 0.34
RDX-201ENST00000343115 SIX2Q9NPC8 291 aa17.18■□□□□ 0.34
RDX-201ENST00000343115 ASTN2O75129 1339 aaPredicted RBP17.18■□□□□ 0.34
RDX-201ENST00000343115 BTNL10A8MVZ5 291 aa17.18■□□□□ 0.34
RDX-201ENST00000343115 CA8P35219 290 aa17.18■□□□□ 0.34
RDX-201ENST00000343115 ASPHQ12797 758 aa17.18■□□□□ 0.34
RDX-201ENST00000343115 AUHQ13825 339 aaKnown RBP17.18■□□□□ 0.34
RDX-201ENST00000343115 MXD4Q14582 209 aaPredicted RBP17.18■□□□□ 0.34
RDX-201ENST00000343115 ANO5Q75V66 913 aa17.18■□□□□ 0.34
RDX-201ENST00000343115 MMP19Q99542 508 aa17.18■□□□□ 0.34
RDX-201ENST00000343115 COL20A1Q9P218 1284 aa17.18■□□□□ 0.34
RDX-201ENST00000343115 C19orf81C9J6K1 198 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms