RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 CDK18Q07002 472 aa19.48■□□□□ 0.71
SMPD1-201ENST00000342245 DLG1Q12959 904 aa19.48■□□□□ 0.71
SMPD1-201ENST00000342245 KRT81Q14533 505 aa19.48■□□□□ 0.71
SMPD1-201ENST00000342245 BCL2A1Q16548 175 aa19.48■□□□□ 0.71
SMPD1-201ENST00000342245 EFHC1Q5JVL4 640 aa19.48■□□□□ 0.71
SMPD1-201ENST00000342245 CYP4F22Q6NT55 531 aa19.48■□□□□ 0.71
SMPD1-201ENST00000342245 GDPD5Q8WTR4 605 aa19.48■□□□□ 0.71
SMPD1-201ENST00000342245 PSPC1Q8WXF1 523 aaKnown RBP19.48■□□□□ 0.71
SMPD1-201ENST00000342245 ZNF696Q9H7X3 374 aa19.48■□□□□ 0.71
SMPD1-201ENST00000342245 UVRAGQ9P2Y5 699 aa19.48■□□□□ 0.71
SMPD1-201ENST00000342245 NEU2Q9Y3R4 380 aa19.48■□□□□ 0.71
SMPD1-201ENST00000342245 SHANK3Q9BYB0 1731 aa19.48■□□□□ 0.71
SMPD1-201ENST00000342245 KLRF2D3W0D1 207 aa19.48■□□□□ 0.71
SMPD1-201ENST00000342245 PIK3CDO00329 1044 aa19.48■□□□□ 0.71
SMPD1-201ENST00000342245 USP1O94782 785 aa19.48■□□□□ 0.71
SMPD1-201ENST00000342245 FOLH1Q04609 750 aa19.48■□□□□ 0.71
SMPD1-201ENST00000342245 NFIL3Q16649 462 aa19.48■□□□□ 0.71
SMPD1-201ENST00000342245 MAP7D1Q3KQU3 841 aa19.48■□□□□ 0.71
SMPD1-201ENST00000342245 RC3H1Q5TC82 1133 aaKnown RBP19.48■□□□□ 0.71
SMPD1-201ENST00000342245 TREML1Q86YW5 311 aa19.48■□□□□ 0.71
SMPD1-201ENST00000342245 MKNK1Q9BUB5 465 aa19.48■□□□□ 0.71
SMPD1-201ENST00000342245 UTP6Q9NYH9 597 aaKnown RBP19.48■□□□□ 0.71
SMPD1-201ENST00000342245 LZTS1Q9Y250 596 aa19.48■□□□□ 0.71
SMPD1-201ENST00000342245 P4HA2O15460 535 aa19.47■□□□□ 0.71
SMPD1-201ENST00000342245 KRT4P19013 534 aa19.47■□□□□ 0.71
SMPD1-201ENST00000342245 PSMC2P35998 433 aaKnown RBP19.47■□□□□ 0.71
SMPD1-201ENST00000342245 HALP42357 657 aa19.47■□□□□ 0.71
SMPD1-201ENST00000342245 NR1H2P55055 460 aa19.47■□□□□ 0.71
SMPD1-201ENST00000342245 ARL4CP56559 192 aa19.47■□□□□ 0.71
SMPD1-201ENST00000342245 HIC1Q14526 733 aa19.47■□□□□ 0.71
SMPD1-201ENST00000342245 HSPBAP1Q96EW2 488 aa19.47■□□□□ 0.71
SMPD1-201ENST00000342245 SLAIN2Q9P270 581 aa19.47■□□□□ 0.71
SMPD1-201ENST00000342245 XIRP1Q702N8 1843 aaKnown RBP19.47■□□□□ 0.71
SMPD1-201ENST00000342245 KIAA1551Q9HCM1 1747 aa19.47■□□□□ 0.71
SMPD1-201ENST00000342245 EML1O00423 815 aa19.47■□□□□ 0.71
SMPD1-201ENST00000342245 TXNDC9O14530 226 aa19.47■□□□□ 0.71
SMPD1-201ENST00000342245 ADCY3O60266 1144 aa19.47■□□□□ 0.71
SMPD1-201ENST00000342245 RRM1P23921 792 aa19.47■□□□□ 0.71
SMPD1-201ENST00000342245 ADRA1DP25100 572 aa19.47■□□□□ 0.71
SMPD1-201ENST00000342245 FMO5P49326 533 aa19.47■□□□□ 0.71
SMPD1-201ENST00000342245 USP41Q3LFD5 358 aa19.47■□□□□ 0.71
SMPD1-201ENST00000342245 MFSD4BQ5TF39 518 aa19.47■□□□□ 0.71
SMPD1-201ENST00000342245 PRUNE1Q86TP1 453 aa19.47■□□□□ 0.71
SMPD1-201ENST00000342245 ZNF564Q8TBZ8 553 aaPredicted RBP19.47■□□□□ 0.71
SMPD1-201ENST00000342245 CEP95Q96GE4 821 aa19.47■□□□□ 0.71
SMPD1-201ENST00000342245 SAYSD1Q9NPB0 183 aa19.47■□□□□ 0.71
SMPD1-201ENST00000342245 TOGARAM1Q9Y4F4 1720 aa19.46■□□□□ 0.71
SMPD1-201ENST00000342245 IL6STP40189 918 aaPredicted RBP19.46■□□□□ 0.71
SMPD1-201ENST00000342245 PRKD1Q15139 912 aaPredicted RBP19.46■□□□□ 0.71
SMPD1-201ENST00000342245 CLEC16AQ2KHT3 1053 aa19.46■□□□□ 0.71
SMPD1-201ENST00000342245 PRPF31Q8WWY3 499 aaKnown RBP19.46■□□□□ 0.71
SMPD1-201ENST00000342245 MAK16Q9BXY0 300 aaKnown RBP19.46■□□□□ 0.71
SMPD1-201ENST00000342245 CHST7Q9NS84 486 aa19.46■□□□□ 0.71
SMPD1-201ENST00000342245 RAB26Q9ULW5 256 aa19.46■□□□□ 0.71
SMPD1-201ENST00000342245 SORCS3Q9UPU3 1222 aa19.46■□□□□ 0.71
SMPD1-201ENST00000342245 KIAA1024Q9UPX6 916 aa19.46■□□□□ 0.71
SMPD1-201ENST00000342245 SUGT1Q9Y2Z0 365 aa19.46■□□□□ 0.71
SMPD1-201ENST00000342245 ZNF804BA4D1E1 1349 aa19.46■□□□□ 0.71
SMPD1-201ENST00000342245 E9PMD0 336 aa19.46■□□□□ 0.71
SMPD1-201ENST00000342245 ATP2A1O14983 1001 aa19.46■□□□□ 0.71
SMPD1-201ENST00000342245 MARCH6O60337 910 aa19.46■□□□□ 0.71
SMPD1-201ENST00000342245 TDP2O95551 362 aa19.46■□□□□ 0.71
SMPD1-201ENST00000342245 TRPC4APQ8TEL6 797 aa19.46■□□□□ 0.71
SMPD1-201ENST00000342245 SNX27Q96L92 541 aa19.46■□□□□ 0.71
SMPD1-201ENST00000342245 NMUR2Q9GZQ4 415 aa19.46■□□□□ 0.71
SMPD1-201ENST00000342245 ZHX3Q9H4I2 956 aa19.46■□□□□ 0.71
SMPD1-201ENST00000342245 STX8Q9UNK0 236 aa19.46■□□□□ 0.71
SMPD1-201ENST00000342245 KLF11O14901 512 aa19.45■□□□□ 0.7
SMPD1-201ENST00000342245 CYP1A2P05177 515 aa19.45■□□□□ 0.7
SMPD1-201ENST00000342245 ENO1P06733 434 aaKnown RBP19.45■□□□□ 0.7
SMPD1-201ENST00000342245 MYL2P10916 166 aa19.45■□□□□ 0.7
SMPD1-201ENST00000342245 RELAQ04206 551 aa19.45■□□□□ 0.7
SMPD1-201ENST00000342245 TRIP13Q15645 432 aaPredicted RBP19.45■□□□□ 0.7
SMPD1-201ENST00000342245 MYLK3Q32MK0 819 aa19.45■□□□□ 0.7
SMPD1-201ENST00000342245 ZNF410Q86VK4 478 aa19.45■□□□□ 0.7
SMPD1-201ENST00000342245 FAM186BQ8IYM0 893 aa19.45■□□□□ 0.7
SMPD1-201ENST00000342245 SENP6Q9GZR1 1112 aaPredicted RBP19.45■□□□□ 0.7
SMPD1-201ENST00000342245 INTS2Q9H0H0 1204 aaKnown RBP19.45■□□□□ 0.7
SMPD1-201ENST00000342245 PCDHA12Q9UN75 941 aa19.45■□□□□ 0.7
SMPD1-201ENST00000342245 ZBED1O96006 694 aa19.45■□□□□ 0.7
SMPD1-201ENST00000342245 FDFT1P37268 417 aa19.45■□□□□ 0.7
SMPD1-201ENST00000342245 CREB5Q02930 508 aa19.45■□□□□ 0.7
SMPD1-201ENST00000342245 CCNG2Q16589 344 aa19.45■□□□□ 0.7
SMPD1-201ENST00000342245 PALB2Q86YC2 1186 aa19.45■□□□□ 0.7
SMPD1-201ENST00000342245 METTL25Q8N6Q8 603 aa19.45■□□□□ 0.7
SMPD1-201ENST00000342245 PRR11Q96HE9 360 aaPredicted RBP19.45■□□□□ 0.7
SMPD1-201ENST00000342245 CROTQ9UKG9 612 aa19.45■□□□□ 0.7
SMPD1-201ENST00000342245 ASTN1O14525 1302 aa19.44■□□□□ 0.7
SMPD1-201ENST00000342245 CCNT2O60583 730 aaKnown RBP19.44■□□□□ 0.7
SMPD1-201ENST00000342245 ADAMTS2O95450 1211 aa19.44■□□□□ 0.7
SMPD1-201ENST00000342245 STIP1P31948 543 aaKnown RBP19.44■□□□□ 0.7
SMPD1-201ENST00000342245 NCKAP1LP55160 1127 aa19.44■□□□□ 0.7
SMPD1-201ENST00000342245 HDAC4P56524 1084 aa19.44■□□□□ 0.7
SMPD1-201ENST00000342245 SF3B3Q15393 1217 aaKnown RBP19.44■□□□□ 0.7
SMPD1-201ENST00000342245 EFHC2Q5JST6 749 aa19.44■□□□□ 0.7
SMPD1-201ENST00000342245 TMC7Q7Z402 723 aa19.44■□□□□ 0.7
SMPD1-201ENST00000342245 COX4I2Q96KJ9 171 aa19.44■□□□□ 0.7
SMPD1-201ENST00000342245 PWWP2AQ96N64 755 aa19.44■□□□□ 0.7
SMPD1-201ENST00000342245 WWP1Q9H0M0 922 aa19.44■□□□□ 0.7
SMPD1-201ENST00000342245 SOX13Q9UN79 622 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms