RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 ZMAT2Q96NC0 199 aaKnown RBP17.27■□□□□ 0.35
HPS1-202ENST00000338546 C11orf70Q9BRQ4 267 aa17.27■□□□□ 0.35
HPS1-202ENST00000338546 DNAI2Q9GZS0 605 aa17.27■□□□□ 0.35
HPS1-202ENST00000338546 NXF3Q9H4D5 531 aaKnown RBP17.27■□□□□ 0.35
HPS1-202ENST00000338546 SLITRK6Q9H5Y7 841 aa17.27■□□□□ 0.35
HPS1-202ENST00000338546 SMYD3Q9H7B4 428 aa17.27■□□□□ 0.35
HPS1-202ENST00000338546 FAM53CQ9NYF3 392 aa17.27■□□□□ 0.35
HPS1-202ENST00000338546 SMARCAL1Q9NZC9 954 aa17.27■□□□□ 0.35
HPS1-202ENST00000338546 OGFRQ9NZT2 677 aa17.27■□□□□ 0.35
HPS1-202ENST00000338546 CDY2AQ9Y6F7 541 aa17.27■□□□□ 0.35
HPS1-202ENST00000338546 PDCD11Q14690 1871 aaKnown RBP17.26■□□□□ 0.35
HPS1-202ENST00000338546 GOLGA6L10A0A0M3HER8 536 aa17.26■□□□□ 0.35
HPS1-202ENST00000338546 KRIT1O00522 736 aa17.26■□□□□ 0.35
HPS1-202ENST00000338546 CAPN15O75808 1086 aa17.26■□□□□ 0.35
HPS1-202ENST00000338546 FAM163BP0C2L3 166 aa17.26■□□□□ 0.35
HPS1-202ENST00000338546 RWDD2BP57060 319 aa17.26■□□□□ 0.35
HPS1-202ENST00000338546 TRIM32Q13049 653 aa17.26■□□□□ 0.35
HPS1-202ENST00000338546 KCNA10Q16322 511 aa17.26■□□□□ 0.35
HPS1-202ENST00000338546 ZNF394Q53GI3 561 aa17.26■□□□□ 0.35
HPS1-202ENST00000338546 DCAF12L1Q5VU92 463 aa17.26■□□□□ 0.35
HPS1-202ENST00000338546 MMS22LQ6ZRQ5 1243 aa17.26■□□□□ 0.35
HPS1-202ENST00000338546 HDXQ7Z353 690 aa17.26■□□□□ 0.35
HPS1-202ENST00000338546 IFT20Q8IY31 132 aa17.26■□□□□ 0.35
HPS1-202ENST00000338546 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.26■□□□□ 0.35
HPS1-202ENST00000338546 FEZF2Q8TBJ5 459 aa17.26■□□□□ 0.35
HPS1-202ENST00000338546 PPP1R13LQ8WUF5 828 aa17.26■□□□□ 0.35
HPS1-202ENST00000338546 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.26■□□□□ 0.35
HPS1-202ENST00000338546 ALG3Q92685 438 aa17.26■□□□□ 0.35
HPS1-202ENST00000338546 SENP6Q9GZR1 1112 aaPredicted RBP17.26■□□□□ 0.35
HPS1-202ENST00000338546 WDR35Q9P2L0 1181 aa17.26■□□□□ 0.35
HPS1-202ENST00000338546 L1RE1Q9UN81 338 aa17.26■□□□□ 0.35
HPS1-202ENST00000338546 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.26■□□□□ 0.35
HPS1-202ENST00000338546 TRIP11Q15643 1979 aa17.25■□□□□ 0.35
HPS1-202ENST00000338546 SMIM28A0A1B0GU29 152 aa17.25■□□□□ 0.35
HPS1-202ENST00000338546 TMEM110-MUSTN1A8MSY1 372 aa17.25■□□□□ 0.35
HPS1-202ENST00000338546 PIRO00625 290 aa17.25■□□□□ 0.35
HPS1-202ENST00000338546 RPS6KA5O75582 802 aa17.25■□□□□ 0.35
HPS1-202ENST00000338546 FGGP02679 453 aa17.25■□□□□ 0.35
HPS1-202ENST00000338546 CD19P15391 556 aa17.25■□□□□ 0.35
HPS1-202ENST00000338546 CCND3P30281 292 aaPredicted RBP17.25■□□□□ 0.35
HPS1-202ENST00000338546 CDH8P55286 799 aa17.25■□□□□ 0.35
HPS1-202ENST00000338546 PRMT2P55345 433 aa17.25■□□□□ 0.35
HPS1-202ENST00000338546 SEL1L2Q5TEA6 688 aa17.25■□□□□ 0.35
HPS1-202ENST00000338546 C9orf57Q5W0N0 161 aa17.25■□□□□ 0.35
HPS1-202ENST00000338546 RNF180Q86T96 592 aa17.25■□□□□ 0.35
HPS1-202ENST00000338546 UNC93AQ86WB7 457 aa17.25■□□□□ 0.35
HPS1-202ENST00000338546 ERICH1Q86X53 443 aa17.25■□□□□ 0.35
HPS1-202ENST00000338546 WDTC1Q8N5D0 677 aa17.25■□□□□ 0.35
HPS1-202ENST00000338546 CCDC26Q8TAB7 109 aa17.25■□□□□ 0.35
HPS1-202ENST00000338546 ZNF560Q96MR9 790 aa17.25■□□□□ 0.35
HPS1-202ENST00000338546 NT5C1AQ9BXI3 368 aa17.25■□□□□ 0.35
HPS1-202ENST00000338546 ELOVL4Q9GZR5 314 aa17.25■□□□□ 0.35
HPS1-202ENST00000338546 MIS12Q9H081 205 aa17.25■□□□□ 0.35
HPS1-202ENST00000338546 IP6K2Q9UHH9 426 aa17.25■□□□□ 0.35
HPS1-202ENST00000338546 DDX20Q9UHI6 824 aaKnown RBP17.25■□□□□ 0.35
HPS1-202ENST00000338546 IPPQ9Y573 584 aa17.25■□□□□ 0.35
HPS1-202ENST00000338546 TCRBV5S1A1TA0A578 114 aa17.24■□□□□ 0.35
HPS1-202ENST00000338546 GPR182O15218 404 aa17.24■□□□□ 0.35
HPS1-202ENST00000338546 CAND2O75155 1236 aa17.24■□□□□ 0.35
HPS1-202ENST00000338546 RAP1GAPP47736 663 aa17.24■□□□□ 0.35
HPS1-202ENST00000338546 GUCY2FP51841 1108 aa17.24■□□□□ 0.35
HPS1-202ENST00000338546 MGAT3Q09327 533 aa17.24■□□□□ 0.35
HPS1-202ENST00000338546 PTPROQ16827 1216 aa17.24■□□□□ 0.35
HPS1-202ENST00000338546 SGO2Q562F6 1265 aa17.24■□□□□ 0.35
HPS1-202ENST00000338546 MAATS1Q7Z4T9 603 aa17.24■□□□□ 0.35
HPS1-202ENST00000338546 SMG8Q8ND04 991 aaKnown RBP17.24■□□□□ 0.35
HPS1-202ENST00000338546 C3orf20Q8ND61 904 aa17.24■□□□□ 0.35
HPS1-202ENST00000338546 C1orf131Q8NDD1 294 aaKnown RBP17.24■□□□□ 0.35
HPS1-202ENST00000338546 KRT12Q99456 494 aa17.24■□□□□ 0.35
HPS1-202ENST00000338546 TSEN34Q9BSV6 310 aaKnown RBP17.24■□□□□ 0.35
HPS1-202ENST00000338546 GDF3Q9NR23 364 aa17.24■□□□□ 0.35
HPS1-202ENST00000338546 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.24■□□□□ 0.35
HPS1-202ENST00000338546 GDAP2Q9NXN4 497 aa17.24■□□□□ 0.35
HPS1-202ENST00000338546 CHORDC1Q9UHD1 332 aaPredicted RBP17.24■□□□□ 0.35
HPS1-202ENST00000338546 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.24■□□□□ 0.35
HPS1-202ENST00000338546 SQORQ9Y6N5 450 aa17.24■□□□□ 0.35
HPS1-202ENST00000338546 TMEM191CA6NGB0 347 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 MAP2K7O14733 419 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 PSTPIP1O43586 416 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 RNASE9P60153 205 aaKnown RBP17.23■□□□□ 0.35
HPS1-202ENST00000338546 CAP1Q01518 475 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 PTK7Q13308 1070 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 FAM47CQ5HY64 1035 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 TWF2Q6IBS0 349 aaKnown RBP17.23■□□□□ 0.35
HPS1-202ENST00000338546 LCLAT1Q6UWP7 414 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 KRT35Q92764 455 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 RUNDC3BQ96NL0 473 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 TRAIPQ9BWF2 469 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 FUT8Q9BYC5 575 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 PARP2Q9UGN5 583 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 DMGDHQ9UI17 866 aaKnown RBP17.23■□□□□ 0.35
HPS1-202ENST00000338546 ST3GAL5Q9UNP4 418 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 HES2Q9Y543 173 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 MOXD2PA6NHM9 499 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 SART1O43290 800 aaKnown RBP17.23■□□□□ 0.35
HPS1-202ENST00000338546 ELNP15502 786 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 LRPAP1P30533 357 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 GABRB2P47870 512 aa17.23■□□□□ 0.35
HPS1-202ENST00000338546 ZNF268Q14587 947 aaPredicted RBP17.23■□□□□ 0.35
HPS1-202ENST00000338546 FAM26DQ5JW98 314 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms